public function testTestReadOnlyState() { // Test that LOVD is in the read-only state. // First, log out of any session that might exist at this time. $this->logout(); // There should be no link to register yourself. // First, I had this findElements(), but Chrome doesn't like that at all, and times out. // Firefox anyway took quite some time, because of the timeout that we have set if elements are not found immediately (normally needed if pages load slowly). // $this->assertFalse((bool) count($this->driver->findElements(WebDriverBy::xpath('//a/b[text()="Register as submitter"]')))); // New attempt to test for absence of register link. $this->assertFalse(strpos($this->driver->findElement(WebDriverBy::xpath('//table[@class="logo"]//td[3]'))->getText(), 'Register as submitter')); $this->driver->get(ROOT_URL . '/src/login'); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/login$/', $this->driver->getCurrentURL())); // Verify warning exists. Finds any TD with this text. $this->driver->findElement(WebDriverBy::xpath('//td[text()="This installation is currently configured to be read-only. Only Managers and higher level users can log in."]')); // Attempt to log in, should fail in a specific way. $this->enterValue(WebDriverBy::name('username'), 'submitter'); $this->enterValue(WebDriverBy::name('password'), 'test1234'); $element = $this->driver->findElement(WebDriverBy::xpath('//input[@value="Log in"]')); $element->click(); // Should return a proper error message. $this->assertEquals('This installation is currently configured to be read-only. Your user level is not sufficient to log in.', $this->driver->findElement(WebDriverBy::cssSelector('div[class=err]'))->getText()); // Also curators should fail. $this->enterValue(WebDriverBy::name('username'), 'curator'); $this->enterValue(WebDriverBy::name('password'), 'test1234'); $element = $this->driver->findElement(WebDriverBy::xpath('//input[@value="Log in"]')); $element->click(); // Should return a proper error message. $this->assertEquals('This installation is currently configured to be read-only. Your user level is not sufficient to log in.', $this->driver->findElement(WebDriverBy::cssSelector('div[class=err]'))->getText()); }
public function testAddSummaryVariantOnlyDescribedOnGenomicLevel() { // Wait for redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("View genomic variant")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants\\/0000000003$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::id("tab_submit")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr[2]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*Please reconsider to submit individual data as well, as it makes the data you submit much more valuable![\\s\\S]*$/', $this->getConfirmation())); $this->chooseOkOnNextConfirmation(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr[2]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&reference=Genome$/', $this->driver->getCurrentURL())); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="allele"]/option[text()="Paternal (confirmed)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="chromosome"]/option[text()="15"]')); $option->click(); $this->enterValue(WebDriverBy::name("VariantOnGenome/DNA"), "g.40702976G>T"); $element = $this->driver->findElement(WebDriverBy::linkText("PubMed")); $element->click(); // Move mouse to let browser hide tooltip of pubmed link (needed for chrome) $this->driver->getMouse()->mouseMove(null, 200, 200); $this->enterValue(WebDriverBy::name("VariantOnGenome/Reference"), "{PMID:Fokkema et al (2011):21520333}"); $this->enterValue(WebDriverBy::name("VariantOnGenome/Frequency"), "11/10000"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="effect_reported"]/option[text()="Effect unknown"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create variant entry']")); $element->click(); $this->assertTrue((bool) preg_match('/^Successfully processed your submission and sent an email notification to the relevant curator[\\s\\S]*$/', $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText())); }
public function testAddScreeningToHealthyIndividual() { // wait for page redirect $this->waitUntil(WebDriverExpectedCondition::presenceOfElementLocated(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr[2]/td[2]/b"))); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/individual\\/00000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr[2]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/screenings[\\s\\S]create&target=00000001$/', $this->driver->getCurrentURL())); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Template[]"]/option[text()="RNA (cDNA)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Template[]"]/option[text()="Protein"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="array for Comparative Genomic Hybridisation"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="array for resequencing"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="array for SNP typing"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="genes[]"]/option[text()="IVD (isovaleryl-CoA dehydrogenase)"]')); $option->click(); $this->check(WebDriverBy::name("variants_found")); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="LOVD3 Admin (#00001)"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create screening information entry']")); $element->click(); $this->assertEquals("Successfully created the screening entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
public function testPostFinishAddPhenotypeInfoToIVAIndividual() { $element = $this->driver->findElement(WebDriverBy::id("tab_individuals")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/individuals\\/IVD$/', $this->driver->getCurrentURL())); // $element = $this->driver->findElement(WebDriverBy::cssSelector("#00000002 > td.ordered")); $element = $this->driver->findElement(WebDriverBy::xpath("//td[text()='00000002']")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/individuals\\/00000002$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::id("viewentryOptionsButton_Individuals")); $element->click(); $element = $this->driver->findElement(WebDriverBy::linkText("Add phenotype information to individual")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/phenotypes[\\s\\S]create&target=00000002$/', $this->driver->getCurrentURL())); $this->enterValue(WebDriverBy::name("Phenotype/Additional"), "Additional phenotype information"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Phenotype/Inheritance"]/option[text()="Familial"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="LOVD3 Admin (#00001)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="statusid"]/option[text()="Public"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create phenotype information entry']")); $element->click(); $this->assertTrue((bool) preg_match('/^Successfully processed your submission and sent an email notification to the relevant curator[\\s\\S]*$/', $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText())); // Wait for page redirect. $this->waitUntil(WebDriverExpectedCondition::titleContains("View phenotype")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/phenotypes\\/0000000003$/', $this->driver->getCurrentURL())); }
public function testCreateAnnouncementReadOnly() { // Create an announcement, that switches LOVD into the read-only state. // This test assumes you're logged in as manager or admin. $sAnnouncement = 'This is a test announcement. LOVD will be closed for registrations, and lower level users can not log in.'; $this->driver->get(ROOT_URL . '/src/announcements?create'); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/announcements[\\s\\S]create$/', $this->driver->getCurrentURL())); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="type"]/option[text()="Warning"]')); $option->click(); $this->enterValue(WebDriverBy::name('announcement'), $sAnnouncement); $this->enterValue(WebDriverBy::name('start_date'), ''); // No value, means active from now(). $this->enterValue(WebDriverBy::name('end_date'), ''); // No value, means active until '9999-12-31 23:59:59'. $this->check(WebDriverBy::name('lovd_read_only')); $this->enterValue(WebDriverBy::name('password'), 'test1234'); $element = $this->driver->findElement(WebDriverBy::xpath('//input[@value="Create announcement"]')); $element->click(); $this->driver->findElement(WebDriverBy::xpath('//td[text()="Successfully created the announcement!"]')); // Finds any TD with this text. // Also check if announcement is actually visible. $this->assertEquals($sAnnouncement, $this->driver->findElement(WebDriverBy::cssSelector('table[class=info]'))->getText()); // Wait for redirect... $this->waitUntil(WebDriverExpectedCondition::titleContains('View announcement')); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/announcements\\/\\d{5}$/', $this->driver->getCurrentURL())); }
public function testAddVariantLocatedWithinGeneToCMTIndividual() { // Wait for redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("Submission of")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/screening\\/0000000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&target=0000000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath('//b[contains(., "A variant that is located within a gene")]')); $element->click(); $element = $this->driver->findElement(WebDriverBy::linkText("GJB1")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&reference=Transcript&geneid=GJB1&target=0000000001$/', $this->driver->getCurrentURL())); $this->uncheck(WebDriverBy::name("ignore_00000001")); $this->enterValue(WebDriverBy::name("00000001_VariantOnTranscript/Exon"), "2"); $this->enterValue(WebDriverBy::name("00000001_VariantOnTranscript/DNA"), "c.34G>T"); $element = $this->driver->findElement(WebDriverBy::cssSelector("button.mapVariant")); $element->click(); // Wait until RNA description field is filled after AJAX request. $firstRNAInputSelector = '(//input[contains(@name, "VariantOnTranscript/RNA")])[1]'; $this->waitUntil(function ($driver) use($firstRNAInputSelector) { $firstRNAInput = $driver->findElement(WebDriverBy::xpath($firstRNAInputSelector)); $firstRNAValue = $firstRNAInput->getAttribute('value'); return !empty($firstRNAValue); }); // Check RNA description for first transcript. $firstRNAInput = $this->driver->findElement(WebDriverBy::xpath($firstRNAInputSelector)); $firstRNAValue = $firstRNAInput->getAttribute('value'); $this->assertTrue((bool) preg_match('/^r\\.\\([\\s\\S]\\)$/', $firstRNAValue)); // Check protein description for first transcript. $firstProteinInputSelector = '(//input[contains(@name, "VariantOnTranscript/Protein")])[1]'; $firstProteinInput = $this->driver->findElement(WebDriverBy::xpath($firstProteinInputSelector)); $firstProteinValue = $firstProteinInput->getAttribute('value'); $this->assertEquals("p.(Gly12Cys)", $firstProteinValue); $GenomicDNAChange = $this->driver->findElement(WebDriverBy::name('VariantOnGenome/DNA')); $this->assertEquals("g.70443591G>T", $GenomicDNAChange->getAttribute('value')); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="00000001_effect_reported"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="00000001_effect_concluded"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="allele"]/option[text()="Maternal (confirmed)"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::linkText("PubMed")); $element->click(); // Move mouse to let browser hide tooltip of pubmed link (needed for chrome) $this->driver->getMouse()->mouseMove(null, 200, 200); $this->enterValue(WebDriverBy::name("VariantOnGenome/Reference"), "{PMID:Fokkema et al (2011):21520333}"); $this->enterValue(WebDriverBy::name("VariantOnGenome/Frequency"), "0.003"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="effect_reported"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="effect_concluded"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="LOVD3 Admin (#00001)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="statusid"]/option[text()="Public"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create variant entry']")); $element->click(); $this->assertEquals("Successfully created the variant entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
public function testAddScreeningToCMTIndividual() { // Wait for redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("Submission of")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/individual\\/00000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr[2]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/screenings[\\s\\S]create&target=00000001$/', $this->driver->getCurrentURL())); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Template[]"]/option[text()="RNA (cDNA)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Template[]"]/option[text()="Protein"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="array for Comparative Genomic Hybridisation"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="array for resequencing"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="array for SNP typing"]')); $option->click(); // $this->addSelection(WebDriverBy::name("genes[]"), "value=GJB1"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="genes[]"]/option[@value="GJB1"]')); $option->click(); $this->check(WebDriverBy::name("variants_found")); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create screening information entry']")); $element->click(); $this->assertEquals("Successfully created the screening entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
public function testCreateIndividualDiagnosedWithCMT() { $element = $this->driver->findElement(WebDriverBy::id("tab_submit")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/individuals[\\s\\S]create$/', $this->driver->getCurrentURL())); $this->enterValue(WebDriverBy::name("Individual/Lab_ID"), "12345CMT"); $element = $this->driver->findElement(WebDriverBy::linkText("PubMed")); $element->click(); // Move mouse to let browser hide tooltip of pubmed link (needed for chrome) $this->driver->getMouse()->mouseMove(null, 200, 200); $this->enterValue(WebDriverBy::name("Individual/Reference"), "{PMID:Fokkema et al (2011):21520333}"); $this->enterValue(WebDriverBy::name("Individual/Remarks"), "No Remarks"); $this->enterValue(WebDriverBy::name("Individual/Remarks_Non_Public"), "Still no remarks"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="active_diseases[]"]/option[text()="CMT (Charcot Marie Tooth Disease)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="LOVD3 Admin (#00001)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="statusid"]/option[text()="Public"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create individual information entry']")); $element->click(); $this->assertEquals("Successfully created the individual information entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
function test1() { $user = new User(); $user->setEmail("*****@*****.**"); $user->setUsername("test"); $user->setPassword("ouhosu"); $this->em->persist($user); $tree = new Tree(); $tree->setTitleAdmin('Tree'); $tree->setPublicId('tree'); $tree->setOwner($user); $this->em->persist($tree); $treeVersion = new TreeVersion(); $treeVersion->setTree($tree); $treeVersion->setPublicId('version'); $this->em->persist($treeVersion); $startNode = new Node(); $startNode->setTreeVersion($treeVersion); $startNode->setTitle("START HERE"); $startNode->setPublicId('start'); $this->em->persist($startNode); $endNode = new Node(); $endNode->setTreeVersion($treeVersion); $endNode->setTitle("END HERE"); $endNode->setPublicId('end'); $this->em->persist($endNode); $nodeOption = new NodeOption(); $nodeOption->setTitle("LETS GO HERE"); $nodeOption->setTreeVersion($treeVersion); $nodeOption->setNode($startNode); $nodeOption->setDestinationNode($endNode); $nodeOption->setPublicId('option'); $this->em->persist($nodeOption); $treeVersionPublished = new TreeVersionPublished(); $treeVersionPublished->setTreeVersion($treeVersion); $treeVersionPublished->setPublishedBy($user); $this->em->flush(); $tvsn = new TreeVersionStartingNode(); $tvsn->setNode($startNode); $tvsn->setTreeVersion($treeVersion); $this->em->persist($tvsn); $published = new TreeVersionPublished(); $published->setTreeVersion($treeVersion); $this->em->persist($published); $this->em->flush(); // ######################################################## LOAD PAGE $this->driver->get('http://localhost/app_dev.php/tree/tree/demo/cascade'); $startLink = $this->driver->findElement(WebDriverBy::id('StartTreeLink')); $this->assertEquals('Start Tree!', $startLink->getText()); // ######################################################## Start Tree $startLink->click(); sleep($this->sleepOnActionWithNetwork); $nodeTitle = $this->driver->findElement(WebDriverBy::id('DemoHere')); $this->assertEquals(0, strpos($nodeTitle->getText(), 'START HERE')); // ######################################################## LOAD PAGE $this->driver->findElement(WebDriverBy::id('DemoHere'))->findElement(WebDriverBy::cssSelector('option[value="option"]'))->click(); sleep($this->sleepOnActionNoNetwork); $nodeTitle = $this->driver->findElement(WebDriverBy::id('DemoHere')); $this->assertGreaterThan(0, strpos($nodeTitle->getText(), 'END HERE')); }
public function testPostFinishAddPhenotypeInfoToCMTIndividual() { // Wait for redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("Submission of")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/screening\\/0000000003$/', $this->driver->getCurrentURL())); // Move mouse to Individuals tab and click 'view all individuals' option. $tabElement = $this->driver->findElement(WebDriverBy::id("tab_individuals")); $this->driver->getMouse()->mouseMove($tabElement->getCoordinates()); $allIndividualsLink = $this->driver->findElement(WebDriverBy::partialLinkText('View all individuals')); $allIndividualsLink->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/individuals$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::cssSelector("td.ordered")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/individuals\\/00000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::id("viewentryOptionsButton_Individuals")); $element->click(); $element = $this->driver->findElement(WebDriverBy::linkText("Add phenotype information to individual")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/phenotypes[\\s\\S]create&target=00000001$/', $this->driver->getCurrentURL())); $this->enterValue(WebDriverBy::name("Phenotype/Additional"), "Additional phenotype information"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Phenotype/Inheritance"]/option[text()="Familial"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create phenotype information entry']")); $element->click(); $this->assertTrue((bool) preg_match('/^Successfully processed your submission and sent an email notification to the relevant curator[\\s\\S]*$/', $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText())); // Wait for redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("View phenotype")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/phenotypes\\/0000000002$/', $this->driver->getCurrentURL())); }
public function testAddVariantOnlyDescribedOnGenomicLevelToIVAIndividual() { // wait for page redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("Submission of")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/screening\\/0000000002$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&target=0000000002$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//table[2]/tbody/tr[2]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&reference=Genome&target=0000000002$/', $this->driver->getCurrentURL())); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="allele"]/option[text()="Paternal (confirmed)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="chromosome"]/option[text()="15"]')); $option->click(); $this->enterValue(WebDriverBy::name("VariantOnGenome/DNA"), "g.40702876G>T"); $element = $this->driver->findElement(WebDriverBy::linkText("PubMed")); $element->click(); // Move mouse to let browser hide tooltip of pubmed link (needed for chrome) $this->driver->getMouse()->mouseMove(null, 200, 200); $this->enterValue(WebDriverBy::name("VariantOnGenome/Reference"), "{PMID:Fokkema et al (2011):21520333}"); $this->enterValue(WebDriverBy::name("VariantOnGenome/Frequency"), "11/10000"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="effect_reported"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="effect_concluded"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="LOVD3 Admin (#00001)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="statusid"]/option[text()="Public"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create variant entry']")); $element->click(); $this->assertEquals("Successfully created the variant entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
public function testAddVariantLocatedWithinGeneToHealthyIndividual() { // wait for page redirect $this->waitUntil(WebDriverExpectedCondition::presenceOfElementLocated(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr/td[2]/b"))); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/screening\\/0000000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&target=0000000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath('//b[contains(., "A variant that is located within a gene")]')); // $element = $this->driver->findElement(WebDriverBy::xpath("//table[2]/tbody/tr/td[2]/b")); $element->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//tr[@id='IVD']/td[2]")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&reference=Transcript&geneid=IVD&target=0000000001$/', $this->driver->getCurrentURL())); $this->uncheck(WebDriverBy::name("ignore_00000001")); $this->enterValue(WebDriverBy::name("00000001_VariantOnTranscript/Exon"), "2"); $this->enterValue(WebDriverBy::name("00000001_VariantOnTranscript/DNA"), "c.456T>G"); $element = $this->driver->findElement(WebDriverBy::cssSelector("button.mapVariant")); $element->click(); // Wait until RNA description field is filled after AJAX request. $firstRNAInputSelector = '(//input[contains(@name, "VariantOnTranscript/RNA")])[1]'; $this->waitUntil(function ($driver) use($firstRNAInputSelector) { $firstRNAInput = $driver->findElement(WebDriverBy::xpath($firstRNAInputSelector)); $firstRNAValue = $firstRNAInput->getAttribute('value'); return !empty($firstRNAValue); }); // Check RNA description. $firstRNAInput = $this->driver->findElement(WebDriverBy::xpath($firstRNAInputSelector)); $firstRNAValue = $firstRNAInput->getAttribute('value'); $this->assertTrue((bool) preg_match('/^r\\.\\([\\s\\S]\\)$/', $firstRNAValue)); // Check protein description. $firstProteinInputSelector = '(//input[contains(@name, "VariantOnTranscript/Protein")])[1]'; $firstProteinInput = $this->driver->findElement(WebDriverBy::xpath($firstProteinInputSelector)); $firstProteinValue = $firstProteinInput->getAttribute('value'); $this->assertRegExp('/^p\\.\\(Tyr152[\\s\\S]*\\)$/', $firstProteinValue); $GenomicDNAChange = $this->driver->findElement(WebDriverBy::name('VariantOnGenome/DNA')); $this->assertEquals("g.40702987T>G", $GenomicDNAChange->getAttribute('value')); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="00000001_effect_reported"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="00000001_effect_concluded"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="allele"]/option[text()="Paternal (confirmed)"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::linkText("PubMed")); $element->click(); $this->enterValue(WebDriverBy::name("VariantOnGenome/Reference"), "{PMID:Fokkema et al (2011):21520333}"); $this->enterValue(WebDriverBy::name("VariantOnGenome/Frequency"), "0.05"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="effect_reported"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="effect_concluded"]/option[text()="Effect unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="LOVD3 Admin (#00001)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="statusid"]/option[text()="Public"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create variant entry']")); $element->click(); $this->assertEquals("Successfully created the variant entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
private function getSelectOptionValues($select) { $select = new WebDriverSelect($this->webDriver->findElement(WebDriverBy::cssSelector($select))); $options = []; foreach ($select->getOptions() as $option) { $options[] = $option->getText(); } return $options; }
public function testFinishIndividualDiagnosedHealthy() { // wait for page redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("Submission of")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/screening\\/0000000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//tr[3]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^Successfully processed your submission and sent an email notification to the relevant curator[\\s\\S]*$/', $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText())); }
public function testMyTestCase() { $this->driver->get(ROOT_URL . "/src/submit/screening/0000000002"); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/screening\\/0000000002$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//tr[3]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^Successfully processed your submission and sent an email notification to the relevant curator[\\s\\S]*$/', $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText())); $this->waitUntil(WebDriverExpectedCondition::titleContains("View individual")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/individuals\\/00000001$/', $this->driver->getCurrentURL())); }
/** * Successful authentication test */ public function testSuccessLogin() { $this->webDriver->get($this->authenticationPageUrl); $this->webDriver->findElement(WebDriverBy::id('login'))->sendKeys($this->login); $this->webDriver->findElement(WebDriverBy::id('password'))->sendKeys($this->password); $this->webDriver->findElement(WebDriverBy::cssSelector('button[type="submit"]'))->click(); $this->webDriver->wait(5); $nameElement = $this->webDriver->findElement(WebDriverBy::xpath('/html/body/nav/div[1]/a/div/span[1]')); $this->assertEquals('Andrei Troskov', $nameElement->getText()); }
public function testMakeUserCurator() { $this->driver->get(ROOT_URL . "/src/genes/IVD?authorize"); $element = $this->driver->findElement(WebDriverBy::linkText("Test Curator")); $element->click(); $this->enterValue(WebDriverBy::xpath("//td/input[@type='password']"), "test1234"); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Save curator list']")); $element->click(); $this->assertEquals("Successfully updated the curator list!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
public function testHumanReadableString() { $this->assertEquals("'string selector'", Locator::humanReadableString("string selector")); $this->assertEquals("css '.something'", Locator::humanReadableString(['css' => '.something'])); $this->assertEquals("css selector '.something'", Locator::humanReadableString(WebDriverBy::cssSelector('.something'))); try { Locator::humanReadableString(null); $this->fail("Expected exception when calling humanReadableString() with invalid selector"); } catch (\InvalidArgumentException $e) { } }
public function testSearch() { $this->webDriver->get($this->url); $input = $this->webDriver->findElement(WebDriverBy::cssSelector('#lst-ib')); $input->sendKeys('yiiframework'); $this->webDriver->getKeyboard()->pressKey(WebDriverKeys::ENTER); // waiting for google load ajax complete. sleep(2); $response = $this->webDriver->findElement(WebDriverBy::cssSelector('#ires div.srg div.g div.rc h3.r a'))->getText(); sleep(3); $this->assertContains('Yii PHP Framework', $response); }
public function testMyTestCase() { $this->driver->get(ROOT_URL . "/src/phenotypes?create&target=00000001"); $this->enterValue(WebDriverBy::name("Phenotype/Additional"), "Phenotype Details"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Phenotype/Inheritance"]/option[text()="Unknown"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="Test Owner (#00006)"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create phenotype information entry']")); $element->click(); $this->assertEquals("Successfully created the phenotype entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
public function testCreateDiseaseIVA() { $this->driver->get(ROOT_URL . "/src/diseases?create"); $this->enterValue(WebDriverBy::name("symbol"), "IVA"); $this->enterValue(WebDriverBy::name("name"), "isovaleric acidemia"); $this->enterValue(WebDriverBy::name("id_omim"), "243500"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="genes[]"]/option[text()="IVD (isovaleryl-CoA dehydrogenase)"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create disease information entry']")); $element->click(); $this->assertEquals("Successfully created the disease information entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
public function testPostFinishAddVariantOnlyDescribedOnGenomicLevelToCMT() { $this->logout(); $this->login('collaborator', 'test1234'); $this->driver->get(ROOT_URL . "/src/"); // Move mouse to Screenings tab and click 'view all screenings' option. $tabElement = $this->driver->findElement(WebDriverBy::id("tab_screenings")); $this->driver->getMouse()->mouseMove($tabElement->getCoordinates()); $allVariantsLink = $this->driver->findElement(WebDriverBy::partialLinkText('View all screenings')); $allVariantsLink->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/screenings$/', $this->driver->getCurrentURL())); // $element = $this->driver->findElement(WebDriverBy::cssSelector("#0000000002 > td.ordered")); $element = $this->driver->findElement(WebDriverBy::xpath("//td[text()='0000000002']")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/screenings\\/0000000002$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::id("viewentryOptionsButton_Screenings")); $element->click(); $element = $this->driver->findElement(WebDriverBy::linkText("Add variant to screening")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&target=0000000002$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//table[2]/tbody/tr[2]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&reference=Genome&target=0000000002$/', $this->driver->getCurrentURL())); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="allele"]/option[text()="Maternal (confirmed)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="chromosome"]/option[text()="X"]')); $option->click(); $this->enterValue(WebDriverBy::name("VariantOnGenome/DNA"), "g.40702876G>T"); $element = $this->driver->findElement(WebDriverBy::linkText("PubMed")); $element->click(); // Move mouse to let browser hide tooltip of pubmed link (needed for chrome) $this->driver->getMouse()->mouseMove(null, 200, 200); $this->enterValue(WebDriverBy::name("VariantOnGenome/Reference"), "{PMID:Fokkema et al (2011):21520333}"); $this->enterValue(WebDriverBy::name("VariantOnGenome/Frequency"), "11/10000"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="effect_reported"]/option[text()="Effect unknown"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create variant entry']")); $element->click(); for ($second = 0;; $second++) { if ($second >= 60) { $this->fail("timeout"); } try { if ($this->isElementPresent(WebDriverBy::cssSelector("table[class=info]"))) { break; } } catch (Exception $e) { } sleep(1); } $this->assertTrue((bool) preg_match('/^Successfully processed your submission and sent an email notification to the relevant curator[\\s\\S]*$/', $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText())); }
public function testArtistsScreen() { $this->loginAndGoTo('artists'); static::assertNotEmpty($this->els('#artistsWrapper .artists article.item')); $firstArtist = $this->el('#artistsWrapper .artists article.item:nth-child(1)'); static::assertNotEmpty($firstArtist->findElement(WebDriverBy::cssSelector('.info .name'))->getText()); static::assertContains('5 albums • 50 songs', $firstArtist->findElement(WebDriverBy::cssSelector('.meta'))->getText()); // test the view modes $this->click('#artistsWrapper > h1.heading > span.view-modes > a.list'); static::assertCount(1, $this->els('#artistsWrapper > div.artists.as-list')); $this->click('#artistsWrapper > h1.heading > span.view-modes > a.thumbnails'); static::assertCount(1, $this->els('#artistsWrapper > div.artists.as-thumbnails')); }
public function find(RemoteWebDriver $webDriver) { switch ($this->type) { case self::ID: return $webDriver->findElement(WebDriverBy::id($this->value)); case self::CSS_SELECTOR: return $webDriver->findElement(WebDriverBy::cssSelector($this->value)); case self::LINK_TEXT: return $webDriver->findElement(WebDriverBy::linkText($this->value)); default: throw new \LogicException('Invalid element search type: ' . $this->type); } }
public function testSearch() { $this->webDriver->get($this->url); $form = $this->webDriver->findElement(WebDriverBy::cssSelector('form.js-site-search-form')); $input = $form->findElement(WebDriverBy::cssSelector('input[type=text].js-site-search-focus')); $input->sendKeys('yii 1.1'); $form->submit(); $link = $this->webDriver->findElement(WebDriverBy::cssSelector('ul.repo-list li.repo-list-item h3.repo-list-name a')); $link->click(); $repositoryMeta = $this->webDriver->findElement(WebDriverBy::cssSelector('span.repository-meta-content'))->getText(); sleep(3); $this->assertContains('Yii PHP Framework 1.1', $repositoryMeta); }
public function testGetArguments() { $by = WebDriverBy::cssSelector('.something'); $step = $this->getStep([null, [$by]]); $this->assertEquals('"' . Locator::humanReadableString($by) . '"', $step->getArguments(true)); $step = $this->getStep([null, [['just', 'array']]]); $this->assertEquals('"just","array"', $step->getArguments(true)); $step = $this->getStep([null, [function () { }]]); $this->assertEquals('"lambda function"', $step->getArguments(true)); $step = $this->getStep([null, [[$this, 'testGetArguments']]]); $this->assertEquals('"callable function"', $step->getArguments(true)); }
public function testMakeUserCollaboratorGJB() { $this->driver->get(ROOT_URL . "/src/genes/GJB1?authorize"); // $this->selectWindow("null"); $element = $this->driver->findElement(WebDriverBy::linkText("Test Collaborator")); $element->click(); // $this->uncheck("xpath=(//input[@name='allow_edit[]'])[2]"); $this->uncheck(WebDriverBy::xpath("(//input[@name='allow_edit[]'])[2]")); $this->enterValue(WebDriverBy::xpath("//td/input[@type='password']"), "test1234"); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Save curator list']")); $element->click(); $this->assertEquals("Successfully updated the curator list!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); }
public function testUninstallLOVDTest() { $this->logout(); $this->login('admin', 'test1234'); $this->driver->get(ROOT_URL . "/src/uninstall"); $this->enterValue(WebDriverBy::name("password"), "test1234"); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Next >>']")); $element->click(); $this->enterValue(WebDriverBy::name("password"), "test1234"); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Uninstall LOVD']")); $element->click(); $this->assertEquals("LOVD successfully uninstalled!\nThank you for having used LOVD!", $this->driver->findElement(WebDriverBy::cssSelector("div[id=lovd__progress_message]"))->getText()); }
public function testAddSummaryVariantVCFFile() { // Mouse hover over Submit tab, to make 'submit new data' link visible. $tabElement = $this->driver->findElement(WebDriverBy::xpath("//img[@id='tab_submit']")); $this->driver->getMouse()->mouseMove($tabElement->getCoordinates()); $element = $this->driver->findElement(WebDriverBy::linkText("Submit new data")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr[2]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*Please reconsider to submit individual data as well, as it makes the data you submit much more valuable![\\s\\S]*$/', $this->getConfirmation())); $this->chooseOkOnNextConfirmation(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//tr[3]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants\\/upload[\\s\\S]create$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr/td[2]/b")); $element->click(); $this->driver->get(ROOT_URL . "/src/variants/upload?create&type=VCF"); $this->enterValue(WebDriverBy::name("variant_file"), ROOT_PATH . "../tests/test_data_files/ShortVCFfilev1.vcf"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="hg_build"]/option[text()="hg19"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="dbSNP_column"]/option[text()="VariantOnGenome/Reference"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="genotype_field"]/option[text()="Use Phred-scaled genotype likelihoods (PL)"]')); $option->click(); $this->check(WebDriverBy::name("allow_mapping")); $this->check(WebDriverBy::name("allow_create_genes")); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="LOVD3 Admin"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="statusid"]/option[text()="Public"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Upload VCF file']")); $element->click(); $this->assertEquals("25 variants were imported, 1 variant could not be imported.", $this->driver->findElement(WebDriverBy::id("lovd__progress_message"))->getText()); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Continue »']")); $element->click(); $this->assertTrue((bool) preg_match('/^Successfully processed your submission and sent an email notification to the relevant curator[\\s\\S]*$/', $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText())); for ($second = 0;; $second++) { if ($second >= 600) { $this->fail("timeout"); } $this->driver->get(ROOT_URL . "/src/ajax/map_variants.php"); if (strcmp("0 99 There are no variants to map in the database", $this->driver->findElement(WebDriverBy::tagName("body"))->getText())) { break; } $this->assertNotContains("of 25 variants", $this->driver->findElement(WebDriverBy::tagName("body"))->getText()); sleep(1); } }
public function testConfirmVariantToCMTIndividual() { // Wait for redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("Submission of")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/screening\\/0000000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr[2]/td[2]")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*Are you sure you are done with submitting the variants found with this screening[\\s\\S][\\s\\S]*$/', $this->getConfirmation())); $this->chooseOkOnNextConfirmation(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/individual\\/00000001$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr[2]/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/screenings[\\s\\S]create&target=00000001$/', $this->driver->getCurrentURL())); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Template[]"]/option[text()="RNA (cDNA)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Template[]"]/option[text()="Protein"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="Single Base Extension"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="Single-Strand DNA Conformation polymorphism Analysis (SSCP)"]')); $option->click(); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="Screening/Technique[]"]/option[text()="SSCA, fluorescent (SSCP)"]')); $option->click(); // $this->addSelection(WebDriverBy::name("genes[]"), "value=GJB1"); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="genes[]"]/option[@value="GJB1"]')); $option->click(); $this->check(WebDriverBy::name("variants_found")); $option = $this->driver->findElement(WebDriverBy::xpath('//select[@name="owned_by"]/option[text()="LOVD3 Admin (#00001)"]')); $option->click(); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Create screening information entry']")); $element->click(); $this->assertEquals("Successfully created the screening entry!", $this->driver->findElement(WebDriverBy::cssSelector("table[class=info]"))->getText()); // Wait for redirect $this->waitUntil(WebDriverExpectedCondition::titleContains("Submission of")); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/submit\\/screening\\/0000000002$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/variants[\\s\\S]create&target=0000000002$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::xpath("//div/table/tbody/tr/td/table/tbody/tr/td[2]/b")); $element->click(); $this->assertTrue((bool) preg_match('/^[\\s\\S]*\\/src\\/screenings\\/0000000002[\\s\\S]confirmVariants$/', $this->driver->getCurrentURL())); $element = $this->driver->findElement(WebDriverBy::id("check_0000000001")); $element->click(); $this->enterValue(WebDriverBy::xpath("//td/input[@type='password']"), "test1234"); $element = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Save variant list']")); $element->click(); $confirmElementSelector = WebDriverBy::xpath('//td[text()="Successfully confirmed the variant entry!"]'); $this->waitUntil(WebDriverExpectedCondition::presenceOfElementLocated($confirmElementSelector)); }