$_DATA->setRowLink($sViewListID, CURRENT_PATH . '/' . $_DATA->sRowID);
$_DATA->viewList($sViewListID);
$_T->printFooter();
exit;
}
if (PATH_COUNT == 3 && $_PE[1] == 'disease' && ctype_digit($_PE[2]) && !ACTION) {
// URL: /phenotypes/disease/00001
// View all phenotype entries for a certain disease.
$nDiseaseID = sprintf('%05d', $_PE[2]);
define('PAGE_TITLE', 'View phenotypes for disease #' . $nDiseaseID);
$_T->printHeader();
$_T->printTitle();
require ROOT_PATH . 'class/object_phenotypes.php';
$_DATA = new LOVD_Phenotype($nDiseaseID);
$_GET['search_diseaseid'] = $nDiseaseID;
$_DATA->viewList('Phenotypes_for_Disease_' . $nDiseaseID, array('diseaseid'), false, false, (bool) ($_AUTH['level'] >= LEVEL_MANAGER), false, true);
$_T->printFooter();
exit;
}
if (PATH_COUNT == 2 && ctype_digit($_PE[1]) && !ACTION) {
// URL: /phenotypes/0000000001
// View specific entry.
$nID = sprintf('%010d', $_PE[1]);
define('PAGE_TITLE', 'View phenotype #' . $nID);
$_T->printHeader();
$_T->printTitle();
// Load appropriate user level for this phenotype entry.
lovd_isAuthorized('phenotype', $nID);
require ROOT_PATH . 'class/object_phenotypes.php';
$_DATA = new LOVD_Phenotype('', $nID);
$zData = $_DATA->viewEntry($nID);
lovd_showJGNavigation($aNavigation, 'Individuals');
print '<BR><BR>' . "\n\n";
if (!empty($zData['phenotypes'])) {
// List of phenotype entries associated with this person, per disease.
$_GET['search_individualid'] = $nID;
$_T->printTitle('Phenotypes', 'H4');
// Repeat searching for diseases, since this individual might have phenotype entry for a disease he doesn't have.
$zData['diseases'] = $_DB->query('SELECT id, symbol, name FROM ' . TABLE_DISEASES . ' WHERE id IN (?' . str_repeat(', ?', count($zData['phenotypes']) - 1) . ')', $zData['phenotypes'])->fetchAllRow();
require ROOT_PATH . 'class/object_phenotypes.php';
foreach ($zData['diseases'] as $aDisease) {
list($nDiseaseID, $sSymbol, $sName) = $aDisease;
if (in_array($nDiseaseID, $zData['phenotypes'])) {
$_GET['search_diseaseid'] = $nDiseaseID;
$_DATA = new LOVD_Phenotype($nDiseaseID);
print '<B>' . $sName . ' (<A href="diseases/' . $nDiseaseID . '">' . $sSymbol . '</A>)</B> <A href="phenotypes?create&target=' . $nID . '&diseaseid=' . $nDiseaseID . '"><IMG src="gfx/plus.png"></A> Add phenotype for this disease';
$_DATA->viewList('Phenotypes_for_I_VE_' . $nDiseaseID, array('phenotypeid', 'individualid', 'diseaseid'), true, true);
}
}
unset($_GET['search_individualid']);
unset($_GET['search_diseaseid']);
} else {
lovd_showInfoTable('No phenotypes found for this individual!', 'stop');
}
if (count($zData['screeningids'])) {
$_GET['search_individualid'] = $nID;
print '<BR><BR>' . "\n\n";
$_T->printTitle('Screenings', 'H4');
require ROOT_PATH . 'class/object_screenings.php';
$_DATA = new LOVD_Screening();
$_DATA->setSortDefault('id');
$_DATA->viewList('Screenings_for_I_VE', array('screeningid', 'individualid', 'created_date', 'edited_date'), true, true);
