$_DATA->setRowLink($sViewListID, CURRENT_PATH . '/' . $_DATA->sRowID); $_DATA->viewList($sViewListID); $_T->printFooter(); exit; } if (PATH_COUNT == 3 && $_PE[1] == 'disease' && ctype_digit($_PE[2]) && !ACTION) { // URL: /phenotypes/disease/00001 // View all phenotype entries for a certain disease. $nDiseaseID = sprintf('%05d', $_PE[2]); define('PAGE_TITLE', 'View phenotypes for disease #' . $nDiseaseID); $_T->printHeader(); $_T->printTitle(); require ROOT_PATH . 'class/object_phenotypes.php'; $_DATA = new LOVD_Phenotype($nDiseaseID); $_GET['search_diseaseid'] = $nDiseaseID; $_DATA->viewList('Phenotypes_for_Disease_' . $nDiseaseID, array('diseaseid'), false, false, (bool) ($_AUTH['level'] >= LEVEL_MANAGER), false, true); $_T->printFooter(); exit; } if (PATH_COUNT == 2 && ctype_digit($_PE[1]) && !ACTION) { // URL: /phenotypes/0000000001 // View specific entry. $nID = sprintf('%010d', $_PE[1]); define('PAGE_TITLE', 'View phenotype #' . $nID); $_T->printHeader(); $_T->printTitle(); // Load appropriate user level for this phenotype entry. lovd_isAuthorized('phenotype', $nID); require ROOT_PATH . 'class/object_phenotypes.php'; $_DATA = new LOVD_Phenotype('', $nID); $zData = $_DATA->viewEntry($nID);
lovd_showJGNavigation($aNavigation, 'Individuals'); print '<BR><BR>' . "\n\n"; if (!empty($zData['phenotypes'])) { // List of phenotype entries associated with this person, per disease. $_GET['search_individualid'] = $nID; $_T->printTitle('Phenotypes', 'H4'); // Repeat searching for diseases, since this individual might have phenotype entry for a disease he doesn't have. $zData['diseases'] = $_DB->query('SELECT id, symbol, name FROM ' . TABLE_DISEASES . ' WHERE id IN (?' . str_repeat(', ?', count($zData['phenotypes']) - 1) . ')', $zData['phenotypes'])->fetchAllRow(); require ROOT_PATH . 'class/object_phenotypes.php'; foreach ($zData['diseases'] as $aDisease) { list($nDiseaseID, $sSymbol, $sName) = $aDisease; if (in_array($nDiseaseID, $zData['phenotypes'])) { $_GET['search_diseaseid'] = $nDiseaseID; $_DATA = new LOVD_Phenotype($nDiseaseID); print '<B>' . $sName . ' (<A href="diseases/' . $nDiseaseID . '">' . $sSymbol . '</A>)</B> <A href="phenotypes?create&target=' . $nID . '&diseaseid=' . $nDiseaseID . '"><IMG src="gfx/plus.png"></A> Add phenotype for this disease'; $_DATA->viewList('Phenotypes_for_I_VE_' . $nDiseaseID, array('phenotypeid', 'individualid', 'diseaseid'), true, true); } } unset($_GET['search_individualid']); unset($_GET['search_diseaseid']); } else { lovd_showInfoTable('No phenotypes found for this individual!', 'stop'); } if (count($zData['screeningids'])) { $_GET['search_individualid'] = $nID; print '<BR><BR>' . "\n\n"; $_T->printTitle('Screenings', 'H4'); require ROOT_PATH . 'class/object_screenings.php'; $_DATA = new LOVD_Screening(); $_DATA->setSortDefault('id'); $_DATA->viewList('Screenings_for_I_VE', array('screeningid', 'individualid', 'created_date', 'edited_date'), true, true);