<?php include_once '../../config/symbini.php'; include_once $SERVER_ROOT . '/classes/TaxonomyUtilities.php'; if (!$SYMB_UID) { header('Location: ../../profile/index.php?refurl=../taxa/admin/taxonomymaintenance.php?' . $_SERVER['QUERY_STRING']); } $action = array_key_exists("action", $_REQUEST) ? $_REQUEST["action"] : ""; $taxonManager = new TaxonomyUtilities(); $isEditor = false; if ($isAdmin || array_key_exists("Taxonomy", $userRights)) { $isEditor = true; } if ($isEditor) { if ($action == 'buildenumtree') { if ($taxonManager->buildHierarchyEnumTree()) { $statusStr = 'SUCCESS building Taxonomic Index'; } else { $statusStr = 'ERROR building Taxonomic Index: ' . $taxonManager->getErrorMessage(); } } elseif ($action == 'rebuildenumtree') { if ($taxonManager->rebuildHierarchyEnumTree()) { $statusStr = 'SUCCESS building Taxonomic Index'; } else { $statusStr = 'ERROR building Taxonomic Index: ' . $taxonManager->getErrorMessage(); } } } ?> <html> <head>
public function getDynamicTreePath() { $retArr = array(); $tid = ''; $acceptedTid = ''; //Temporary code: check to make sure taxaenumtree is populated //This code can be removed somewhere down the line $sqlTest = 'SELECT tid FROM taxaenumtree LIMIT 1'; $rsTest = $this->conn->query($sqlTest); if (!$rsTest->num_rows) { echo '<div style="color:red;margin:30px;">'; echo 'NOTICE: Building new taxonomic hierarchy table (taxaenumtree).<br/>'; echo 'This may take a few minutes, but only needs to be done once.<br/>'; echo 'Do not terminate this process early.'; echo '</div>'; ob_flush(); flush(); $taxMainObj = new TaxonomyUtilities(); $taxMainObj->buildHierarchyEnumTree(); } $rsTest->free(); //Get target taxa (we don't want children and parents of non-accepted taxa, so we'll get those later) if ($this->targetStr) { $sql1 = 'SELECT DISTINCT t.tid, ts.tidaccepted ' . 'FROM taxa t LEFT JOIN taxstatus ts ON t.tid = ts.tid ' . 'LEFT JOIN taxstatus ts1 ON t.tid = ts1.tidaccepted ' . 'LEFT JOIN taxa t1 ON ts1.tid = t1.tid ' . 'WHERE (ts.taxauthid = 1 OR ts.taxauthid IS NULL) AND (ts1.taxauthid = 1 OR ts1.taxauthid IS NULL) '; if (is_numeric($this->targetStr)) { $sql1 .= 'AND (t.tid IN(' . implode(',', $this->targetStr) . ') OR (ts1.tid = ' . $this->targetStr . '))'; } else { $sql1 .= 'AND ((t.sciname = "' . $this->targetStr . '") OR (t1.sciname = "' . $this->targetStr . '"))'; } //echo "<div>".$sql1."</div>"; $rs1 = $this->conn->query($sql1); while ($row1 = $rs1->fetch_object()) { if ($rs1->num_rows == 1) { $tid = $row1->tid; } elseif ($row1->tid != $row1->tidaccepted) { $tid = $row1->tid; $acceptedTid = $row1->tidaccepted; } } $rs1->free(); if ($tid) { $i = 1; $prevTid = ''; $retArr[0] = 'root'; $sql2 = 'SELECT t.RankId, te.parenttid, ts.tidaccepted, ts.parenttid AS par2 ' . 'FROM (taxa t LEFT JOIN taxaenumtree te ON t.TID = te.parenttid) ' . 'LEFT JOIN taxstatus ts ON te.parenttid = ts.tid ' . 'WHERE te.TID = ' . ($acceptedTid ? $acceptedTid : $tid) . ' AND te.taxauthid = 1 AND ts.taxauthid = 1 ' . 'ORDER BY t.RankId '; //echo "<div>".$sql2."</div>"; $rs2 = $this->conn->query($sql2); while ($row2 = $rs2->fetch_object()) { if (!$prevTid || $row2->par2 == $prevTid) { $retArr[$i] = $row2->tidaccepted; $prevTid = $row2->tidaccepted; } else { $sql3 = 'SELECT tid ' . 'FROM taxstatus ' . 'WHERE parenttid = ' . $prevTid . ' AND taxauthid = 1 ' . 'AND tid IN(SELECT parenttid FROM taxaenumtree WHERE tid = ' . $tid . ' AND taxauthid = 1) '; //echo "<div>".$sql3."</div>"; $rs3 = $this->conn->query($sql3); while ($row3 = $rs3->fetch_object()) { $retArr[$i] = $row3->tid; $prevTid = $row3->tid; } $rs3->free(); } $i++; } if ($acceptedTid) { $retArr[$i] = $acceptedTid; $i++; } $retArr[$i] = $tid; $rs2->free(); } } return $retArr; }