<?php
include '../../phpdb/dbExpertConnector.php';
$connector = new dbConnector();
$buffer = $connector->query("SELECT block_id,tree,treestring,sequences,base_score,game_par,game_highscore FROM bioblocks");
while ($myrow = $connector->fetchArray($buffer)) {
/* misc variables */
$blockid = $myrow['block_id'];
$tree_string = $myrow['treestring'];
/* build species list */
$tree_struct = $myrow['tree'];
$speclist = array();
$newid = "";
for ($i = 0; $i <= strlen($tree_struct); $i++) {
$carac = substr($tree_struct, $i, 1);
if ($carac == '(' or $carac == ')' or $carac == ',') {
if ($newid != "") {
array_push($speclist, $newid);
$newid = "";
}
} else {
$newid .= $carac;
}
}
/* build sequence array */
$fulldataseqs = json_decode($myrow['sequences'], true);
$sequences = $fulldataseqs['sequence'];
/* combine */
$fullsequences = array_combine($speclist, $sequences);
/* compute real score */
$treefilename = $blockid . ".tree";
}
}
/* define arguments to submit */
$id = $_POST['stage'];
$user = $_POST['user'];
$score = $_POST['score'];
$fulltree = $_POST['tree'];
/* retrieve missing data */
$connector = new dbConnector();
/* id syntax: s<num> from bioblocks & x<num> from expertblocks */
/* if it starts with x, one must look into the expertblock data to know the bioblocks id */
$prefix = $id[0];
$suffix = substr($id, 1);
if ($prefix == 's') {
$buffer = $connector->query("SELECT tree,treestring FROM bioblocks WHERE block_id = {$suffix}");
$xarray = $connector->fetchArray($buffer);
$tree_string = $xarray['treestring'];
$tree_struct = $xarray['tree'];
$bio_id = $suffix;
} elseif ($prefix == 'x') {
$buffer = $connector->query("SELECT bioblock_id,tree,treestring FROM expertblocks WHERE block_id = {$suffix}");
$xarray = $connector->fetchArray($buffer);
$tree_string = $xarray['treestring'];
$tree_struct = $xarray['tree'];
$bio_id = $xarray['bioblock_id'];
}
/* build species list */
$speclist = array();
$newid = "";
for ($i = 0; $i <= strlen($tree_struct); $i++) {
$carac = substr($tree_struct, $i, 1);
