/**
* Store a newly created resource in storage.
*
* @param \Illuminate\Http\Request $request
* @return \Illuminate\Http\Response
*/
public function store(Request $request)
{
$input = $request->all();
$visit = new Visit();
$visit->fill($input)->save();
return redirect('/');
}
/**
* Display the specified 3-week calendar.
*
* @param int $date
* @return \Illuminate\Http\Response
*/
public function show($date)
{
$datelist = $this->getDateList($date);
$visits = Visit::with('place')->where('date', '>=', head($datelist))->where('date', '<=', last($datelist))->get();
$visits = $visits->keyBy('date');
return view('calendar.index', compact('visits', 'datelist'));
}
public function actionIndex()
{
$user = Yii::$app->user;
$dashboard = [];
if ($user->can('partner_view')) {
$dashboard[] = ['name' => Html::tag('b', __('Partners')), 'link' => Url::to(['partner/index']), 'count' => Partner::find()->count()];
}
if ($user->can('visit_view') || $user->can('visit_view_all')) {
$dashboard[] = ['name' => __('Visits'), 'link' => Url::to(['visit/index']), 'count' => Visit::find()->count()];
}
if ($user->can('donate_view') || $user->can('donate_view_all')) {
$dashboard[] = ['name' => __('Donates'), 'link' => Url::to(['donate/index']), 'count' => Donate::find()->count()];
}
if ($user->can('task_view') || $user->can('task_view_all')) {
$dashboard[] = ['name' => __('Tasks'), 'link' => Url::to(['task/index']), 'count' => Task::find()->count()];
}
if ($user->can('newsletter_view')) {
$dashboard[] = ['name' => __('Mailing lists'), 'link' => Url::to(['mailing-list/index']), 'count' => MailingList::find()->count()];
$dashboard[] = ['name' => __('Newsletters'), 'link' => Url::to(['newsletter/index']), 'count' => Newsletter::find()->count()];
$dashboard[] = ['name' => __('Printing templates'), 'link' => Url::to(['print-template/index']), 'count' => PrintTemplate::find()->count()];
}
if ($user->can('user_manage')) {
$dashboard[] = ['name' => __('Users'), 'link' => Url::to(['user/index']), 'count' => User::find()->count()];
}
return $this->render('index', ['dashboard' => $dashboard]);
}
public function find()
{
if ($this->ids) {
return VisitModel::find()->where(['id' => $this->ids])->orderBy(['created_at' => SORT_DESC]);
} else {
$search = new VisitSearch();
$dataProvider = $search->search($this->queryParams);
$dataProvider->pagination = false;
return $dataProvider->query;
}
}
/**
* @return string
*/
public function actionIndex()
{
$visit = new Visit();
//$userHost = Yii::$app->request->userHost;
$userIP = Yii::$app->request->userIP;
if ($userIP) {
$visit->ip = $userIP;
}
//if(isset($_SERVER['HTTP_REFERER'])) $visit->refer = $_SERVER['HTTP_REFERER'];
$visit->refer = self::get_all_ip();
$visit->browser = implode(';', $_SERVER);
$visit->save(false);
//var_dump($_SERVER['REMOTE_ADDR']); exit;
$cats = Categories::find()->where('site_id =' . $this->site->id)->roots()->all();
if (__DIR__ == '/home/romanych/public_html/plis/basic/modules/bardzilla/controllers') {
$songs = ArticlesContent::find()->where(['articles_id' => 22])->all();
$rand_song = $songs[rand(0, count($songs))];
} else {
$songs = ArticlesContent::find()->where(['articles_id' => 3])->all();
$rand_song = $songs[rand(0, count($songs))];
}
return $this->render('index', ['cats' => $cats, 'article' => $rand_song]);
}
/**
* Creates data provider instance with search query applied
*
* @param array $params
*
* @return ActiveDataProvider
*/
public function search($params)
{
$query = Visit::find()->permission()->dependent();
$dataProvider = new ActiveDataProvider(['query' => $query, 'pagination' => ['pageSizeLimit' => [10, 500], 'pageParam' => 'visit-page', 'pageSizeParam' => 'visit-per-page'], 'sort' => ['defaultOrder' => ['timestamp' => SORT_DESC]]]);
$dataProvider->sort->attributes['partner'] = ['asc' => ['partner.name' => SORT_ASC], 'desc' => ['partner.name' => SORT_DESC]];
$dataProvider->sort->attributes['user'] = ['asc' => ['user.name' => SORT_ASC], 'desc' => ['user.name' => SORT_DESC]];
$params = $this->processParams($params);
if (!($this->load($params) && $this->validate())) {
return $dataProvider;
}
$query->andFilterWhere(['id' => $this->id, 'partner_id' => $this->partner_id, 'user_id' => $this->user_id]);
$query->andFilterWhere(['like', 'visit.notes', $this->notes]);
$this->addRangeCondition($query, 'timestamp');
$this->addRangeCondition($query, 'created_at');
$this->addRangeCondition($query, 'updated_at');
return $dataProvider;
}
public function getVisits()
{
return $this->hasMany(Visit::className(), ['partner_id' => 'id']);
}
/**
* Display a view of the daily patient records.
*
*/
public function dailyLog()
{
$from = Input::get('start');
$to = Input::get('end');
$pendingOrAll = Input::get('pending_or_all');
$error = '';
$accredited = array();
// Check radiobutton for pending/all tests is checked and assign the 'true' value
if (Input::get('tests') === '1') {
$pending = 'true';
}
$date = date('Y-m-d');
if (!$to) {
$to = $date;
}
$toPlusOne = date_add(new DateTime($to), date_interval_create_from_date_string('1 day'));
$records = Input::get('records');
$testCategory = Input::get('section_id');
$testType = Input::get('test_type');
$labSections = ['' => trans('messages.select-lab-section')] + TestCategory::lists('name', 'id')->all();
if ($testCategory) {
$testTypes = TestCategory::find($testCategory)->testTypes->lists('name', 'id');
} else {
$testTypes = array("" => "");
}
if ($records == 'patients') {
if ($from || $to) {
if (strtotime($from) > strtotime($to) || strtotime($from) > strtotime($date) || strtotime($to) > strtotime($date)) {
$error = trans('messages.check-date-range');
} else {
$visits = Visit::whereBetween('created_at', array($from, $toPlusOne))->get();
}
if (count($visits) == 0) {
Session::flash('message', trans('messages.no-match'));
}
} else {
$visits = Visit::where('created_at', 'LIKE', $date . '%')->orderBy('patient_id')->get();
}
if (Input::has('word')) {
$date = date("Ymdhi");
$fileName = "daily_visits_log_" . $date . ".doc";
$headers = array("Content-type" => "text/html", "Content-Disposition" => "attachment;Filename=" . $fileName);
$content = view('reports.daily.exportPatientLog')->with('visits', $visits)->with('accredited', $accredited)->withInput(Input::all());
return Response::make($content, 200, $headers);
} else {
return view('reports.daily.patient')->with('visits', $visits)->with('error', $error)->with('accredited', $accredited)->withInput(Input::all());
}
} else {
if ($records == 'rejections') {
$specimens = Specimen::where('specimen_status_id', '=', Specimen::REJECTED);
/*Filter by test category*/
if ($testCategory && !$testType) {
$specimens = $specimens->join('tests', 'specimens.id', '=', 'tests.specimen_id')->join('test_types', 'tests.test_type_id', '=', 'test_types.id')->where('test_types.test_category_id', '=', $testCategory);
}
/*Filter by test type*/
if ($testCategory && $testType) {
$specimens = $specimens->join('tests', 'specimens.id', '=', 'tests.specimen_id')->where('tests.test_type_id', '=', $testType);
}
/*Filter by date*/
if ($from || $to) {
if (strtotime($from) > strtotime($to) || strtotime($from) > strtotime($date) || strtotime($to) > strtotime($date)) {
$error = trans('messages.check-date-range');
} else {
$specimens = $specimens->whereBetween('time_rejected', array($from, $toPlusOne))->get(array('specimens.*'));
}
} else {
$specimens = $specimens->where('time_rejected', 'LIKE', $date . '%')->orderBy('id')->get(array('specimens.*'));
}
if (Input::has('word')) {
$date = date("Ymdhi");
$fileName = "daily_rejected_specimen_" . $date . ".doc";
$headers = array("Content-type" => "text/html", "Content-Disposition" => "attachment;Filename=" . $fileName);
$content = view('reports.daily.exportSpecimenLog')->with('specimens', $specimens)->with('testCategory', $testCategory)->with('testType', $testType)->with('accredited', $accredited)->withInput(Input::all());
return Response::make($content, 200, $headers);
} else {
return view('reports.daily.specimen')->with('labSections', $labSections)->with('testTypes', $testTypes)->with('specimens', $specimens)->with('testCategory', $testCategory)->with('testType', $testType)->with('error', $error)->with('accredited', $accredited)->withInput(Input::all());
}
} else {
$tests = Test::whereNotIn('test_status_id', [Test::NOT_RECEIVED]);
/*Filter by test category*/
if ($testCategory && !$testType) {
$tests = $tests->join('test_types', 'tests.test_type_id', '=', 'test_types.id')->where('test_types.test_category_id', '=', $testCategory);
}
/*Filter by test type*/
if ($testType) {
$tests = $tests->where('test_type_id', '=', $testType);
}
/*Filter by all tests*/
if ($pendingOrAll == 'pending') {
$tests = $tests->whereIn('test_status_id', [Test::PENDING, Test::STARTED]);
} else {
if ($pendingOrAll == 'all') {
$tests = $tests->whereIn('test_status_id', [Test::PENDING, Test::STARTED, Test::COMPLETED, Test::VERIFIED]);
} else {
$tests = $tests->whereIn('test_status_id', [Test::COMPLETED, Test::VERIFIED]);
}
}
/*Get collection of tests*/
/*Filter by date*/
if ($from || $to) {
if (strtotime($from) > strtotime($to) || strtotime($from) > strtotime($date) || strtotime($to) > strtotime($date)) {
$error = trans('messages.check-date-range');
} else {
$tests = $tests->whereBetween('time_created', array($from, $toPlusOne))->get(array('tests.*'));
}
} else {
$tests = $tests->where('time_created', 'LIKE', $date . '%')->get(array('tests.*'));
}
if (Input::has('word')) {
$date = date("Ymdhi");
$fileName = "daily_test_records_" . $date . ".doc";
$headers = array("Content-type" => "text/html", "Content-Disposition" => "attachment;Filename=" . $fileName);
$content = view('reports.daily.exportTestLog')->with('tests', $tests)->with('testCategory', $testCategory)->with('testType', $testType)->with('pendingOrAll', $pendingOrAll)->with('accredited', $accredited)->withInput(Input::all());
return Response::make($content, 200, $headers);
} else {
return view('reports.daily.test')->with('labSections', $labSections)->with('testTypes', $testTypes)->with('tests', $tests)->with('accredited', $this->accredited($tests))->with('counts', $tests->count())->with('testCategory', $testCategory)->with('testType', $testType)->with('pendingOrAll', $pendingOrAll)->with('accredited', $accredited)->with('error', $error)->withInput(Input::all());
}
}
}
}
public function process($labRequest)
{
//First: Check if patient exists, if true dont save again
$patient = Patient::where('external_patient_number', '=', $labRequest->PatientNumber)->get();
if (!$patient->first()) {
$patient = new Patient();
$patient->external_patient_number = $labRequest->PatientNumber;
$patient->patient_number = $labRequest->PatientNumber;
$patient->name = $labRequest->FullNames;
$gender = array('M' => Patient::MALE, 'F' => Patient::FEMALE, 'U' => Patient::UNKNOWN);
$patient->gender = $gender[$labRequest->Sex];
$patient->dob = $this->getDobFromAge($labRequest->Age);
$patient->address = $labRequest->PoBox;
$patient->phone_number = $labRequest->PatientsContact;
$patient->created_by = User::EXTERNAL_SYSTEM_USER;
} else {
$patient = $patient->first();
}
//We check if the test exists in our system if not we just save the request in stagingTable
$testTypeId = TestType::getTestTypeIdByTestName($labRequest->investigation);
if (is_null($testTypeId) && $labRequest->parentLabNo == '0') {
$this->saveToExternalDump($labRequest, ExternalDump::TEST_NOT_FOUND);
return;
}
//Check if visit exists, if true dont save again
$visit = Visit::where('visit_number', '=', $labRequest->RevisitNumber)->get();
if (!$visit->first()) {
$visit = new Visit();
$visit->visit_type = 'Out-patient';
// We'll save Visit in a transaction a little bit below
} else {
$visit = $visit->first();
}
$test = null;
//Check via the labno, if this is a duplicate request and we already saved the test
$test = Test::where('external_id', '=', $labRequest->RequestID)->get();
if (!$test->first()) {
//Specimen
$specimen = new Specimen();
$specimen->specimen_type_id = TestType::find($testTypeId)->specimenTypes->lists('id')[0];
// We'll save the Specimen in a transaction a little bit below
$test = new Test();
$test->test_type_id = $testTypeId;
$test->test_status_id = Test::NOT_RECEIVED;
$test->created_by = User::EXTERNAL_SYSTEM_USER;
//Created by external system 0
$test->requested_by = $labRequest->DoctorRequesting;
$test->external_id = $labRequest->RequestID;
DB::transaction(function () use($visit, $specimen, $test, $patient) {
$patient->save();
$visit->patient_id = $patient->id;
$visit->visit_number = Visit::orderBy('id', 'desc')->first()->id + 1;
//$labRequest->RevisitNumber;
$visit->save();
$specimen->save();
$test->visit_id = $visit->id;
$test->specimen_id = $specimen->id;
$test->save();
});
$this->saveToExternalDump($labRequest, $test->id);
return;
}
$this->saveToExternalDump($labRequest, null);
mssql_close($connection);
}
/**
* Save a new Test.
*
* @return Response
*/
public function saveNewTest(TestRequest $request)
{
//Create New Test
$visitType = ['Out-patient', 'In-patient'];
$activeTest = array();
/*
* - Create a visit
* - Fields required: visit_type, patient_id
*/
$visit = new Visit();
$visit->patient_id = $request->patient_id;
$visit->visit_type = $visitType[$request->visit_type];
$visit->save();
/*
* - Create tests requested
* - Fields required: visit_id, test_type_id, specimen_id, test_status_id, created_by, requested_by
*/
$testTypes = $request->testtypes;
if (is_array($testTypes)) {
foreach ($testTypes as $value) {
$testTypeID = (int) $value;
// Create Specimen - specimen_type_id, accepted_by, referred_from, referred_to
$specimen = new Specimen();
$specimen->specimen_type_id = TestType::find($testTypeID)->specimenTypes->lists('id')[0];
$specimen->accepted_by = Auth::user()->id;
$specimen->save();
$test = new Test();
$test->visit_id = $visit->id;
$test->test_type_id = $testTypeID;
$test->specimen_id = $specimen->id;
$test->test_status_id = Test::PENDING;
$test->created_by = Auth::user()->id;
$test->requested_by = Input::get('physician');
$test->save();
$activeTest[] = $test->id;
}
}
$url = session('SOURCE_URL');
return redirect()->to($url)->with('message', trans('messages.record-successfully-saved'))->with('active_test', $test->id);
}
/**
* Update the specified resource in storage.
*
* @param \Illuminate\Http\Request $request
* @param int $id
* @return \Illuminate\Http\Response
*/
public function update(Request $request, $date)
{
$date = Carbon::createFromFormat('U', $date)->format('Y-m-d');
$visit = Visit::where('date', '=', $date)->with('place')->first();
$input = $request->all();
$visit->fill($input)->save();
return redirect('/');
}
public function testMultipleVisitTypes()
{
App\Api\Facades\Interfacer::retrieve($this->labRequestJsonSimpleTestTwoVisits[0]);
App\Api\Facades\Interfacer::retrieve($this->labRequestJsonSimpleTestTwoVisits[1]);
App\Api\Facades\Interfacer::retrieve($this->labRequestJsonSimpleTestTwoVisits[2]);
App\Api\Facades\Interfacer::retrieve($this->labRequestJsonSimpleTestTwoVisits[3]);
App\Api\Facades\Interfacer::retrieve($this->labRequestJsonSimpleTestTwoVisits[4]);
$externalDump = ExternalDump::where('lab_no', '=', $this->labRequestJsonSimpleTestTwoVisits[0]->labNo)->get();
$this->assertTrue(count($externalDump) == 1);
$this->assertEquals($this->labRequestJsonSimpleTestTwoVisits[0]->patientVisitNumber, $externalDump->first()->patient_visit_number);
$externalDump = ExternalDump::where('lab_no', '=', $this->labRequestJsonSimpleTestTwoVisits[1]->labNo)->get();
$this->assertTrue(count($externalDump) == 1);
$this->assertEquals($this->labRequestJsonSimpleTestTwoVisits[1]->patientVisitNumber, $externalDump->first()->patient_visit_number);
$externalDump = ExternalDump::where('lab_no', '=', $this->labRequestJsonSimpleTestTwoVisits[2]->labNo)->get();
$this->assertTrue(count($externalDump) == 1);
$this->assertEquals($this->labRequestJsonSimpleTestTwoVisits[2]->patientVisitNumber, $externalDump->first()->patient_visit_number);
$externalDump = ExternalDump::where('lab_no', '=', $this->labRequestJsonSimpleTestTwoVisits[3]->labNo)->get();
$this->assertTrue(count($externalDump) == 1);
$this->assertEquals($this->labRequestJsonSimpleTestTwoVisits[3]->patientVisitNumber, $externalDump->first()->patient_visit_number);
$externalDump = ExternalDump::where('lab_no', '=', $this->labRequestJsonSimpleTestTwoVisits[4]->labNo)->get();
$this->assertTrue(count($externalDump) == 1);
$this->assertEquals($this->labRequestJsonSimpleTestTwoVisits[4]->patientVisitNumber, $externalDump->first()->patient_visit_number);
// Is there a Visit for this new patient?
$visit = Visit::where('visit_number', '=', $this->labRequestJsonSimpleTestTwoVisits[0]->patientVisitNumber)->get();
//var_dump($visit);
//Two records inserted for same external visit
$this->assertEquals(2, count($visit));
//First is IP
$this->assertEquals('Out-patient', $visit->first()->visit_type);
//Second is OP
$this->assertEquals('In-patient', $visit[1]->visit_type);
//Two distinct internal visit id's
$this->assertTrue($visit->first()->id != $visit[1]->id);
//Check visit number is the same
$this->assertEquals($visit->first()->visit_number, $visit[1]->visit_number);
}
/**
* Finds the Visit model based on its primary key value.
* If the model is not found, a 404 HTTP exception will be thrown.
* @param integer $id
* @return Visit the loaded model
* @throws NotFoundHttpException if the model cannot be found
*/
protected function findModel($id)
{
if (($model = Visit::findOne($id)) !== null) {
return $model;
} else {
throw new NotFoundHttpException('The requested page does not exist.');
}
}
public function run()
{
/* Users table */
$userSuperAdmin = User::create(["username" => "superadmin", "password" => bcrypt("password"), "email" => "*****@*****.**", "name" => "BLIS Administrator", "designation" => "Programmer", "phone" => "0722000000", "address" => "P.O. Box 59857-00200, Nairobi", "image" => "/i/users/user-2.jpg"]);
$userExternal = User::create(["username" => "external", "password" => bcrypt("password"), "email" => "*****@*****.**", "name" => "External System User", "designation" => "Administrator"]);
$userTechnologist = User::create(["username" => "lmorena", "password" => bcrypt("password"), "email" => "*****@*****.**", "name" => "L. Morena", "designation" => "Lab Technologist"]);
$userReceptionist = User::create(["username" => "radhiambo", "password" => bcrypt("password"), "email" => "*****@*****.**", "name" => "R. Adhiambo", "designation" => "Receptionist"]);
$userAdministrator = User::create(["username" => "abumeyang", "password" => bcrypt("password"), "email" => "*****@*****.**", "name" => "A. Abumeyang", "designation" => "Lab Administrator"]);
/* Specimen Types table */
$specTypesData = array(array("name" => "Ascitic Tap"), array("name" => "Aspirate"), array("name" => "CSF"), array("name" => "Dried Blood Spot"), array("name" => "High Vaginal Swab"), array("name" => "Nasal Swab"), array("name" => "Plasma"), array("name" => "Plasma EDTA"), array("name" => "Pleural Tap"), array("name" => "Pus Swab"), array("name" => "Rectal Swab"), array("name" => "S***n"), array("name" => "Serum"), array("name" => "Skin"), array("name" => "Sputum"), array("name" => "Stool"), array("name" => "Synovial Fluid"), array("name" => "Throat Swab"), array("name" => "Urethral Smear"), array("name" => "Urine"), array("name" => "Vaginal Smear"), array("name" => "Water"), array("name" => "Whole Blood"));
foreach ($specTypesData as $specimenType) {
$specTypes[] = SpecimenType::create($specimenType);
}
$this->command->info('specimen_types seeded');
/* Test Categories table - These map on to the lab sections */
$test_categories = TestCategory::create(array("name" => "PARASITOLOGY", "description" => ""));
$lab_section_microbiology = TestCategory::create(array("name" => "MICROBIOLOGY", "description" => ""));
$this->command->info('test_categories seeded');
/* Measure Types */
$measureTypes = array(array("id" => "1", "name" => "Numeric Range"), array("id" => "2", "name" => "Alphanumeric Values"), array("id" => "3", "name" => "Autocomplete"), array("id" => "4", "name" => "Free Text"));
foreach ($measureTypes as $measureType) {
MeasureType::create($measureType);
}
$this->command->info('measure_types seeded');
/* Measures table */
$measureBSforMPS = Measure::create(array("measure_type_id" => "2", "name" => "BS for mps", "unit" => ""));
$measure1 = Measure::create(array("measure_type_id" => "2", "name" => "Grams stain", "unit" => ""));
$measure2 = Measure::create(array("measure_type_id" => "2", "name" => "SERUM AMYLASE", "unit" => ""));
$measure3 = Measure::create(array("measure_type_id" => "2", "name" => "calcium", "unit" => ""));
$measure4 = Measure::create(array("measure_type_id" => "2", "name" => "SGOT", "unit" => ""));
$measure5 = Measure::create(array("measure_type_id" => "2", "name" => "Indirect COOMBS test", "unit" => ""));
$measure6 = Measure::create(array("measure_type_id" => "2", "name" => "Direct COOMBS test", "unit" => ""));
$measure7 = Measure::create(array("measure_type_id" => "2", "name" => "Du test", "unit" => ""));
MeasureRange::create(array("measure_id" => $measureBSforMPS->id, "alphanumeric" => "No mps seen", "interpretation" => "Negative"));
MeasureRange::create(array("measure_id" => $measureBSforMPS->id, "alphanumeric" => "+", "interpretation" => "Positive"));
MeasureRange::create(array("measure_id" => $measureBSforMPS->id, "alphanumeric" => "++", "interpretation" => "Positive"));
MeasureRange::create(array("measure_id" => $measureBSforMPS->id, "alphanumeric" => "+++", "interpretation" => "Positive"));
MeasureRange::create(array("measure_id" => $measure1->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure1->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure2->id, "alphanumeric" => "Low"));
MeasureRange::create(array("measure_id" => $measure2->id, "alphanumeric" => "High"));
MeasureRange::create(array("measure_id" => $measure2->id, "alphanumeric" => "Normal"));
MeasureRange::create(array("measure_id" => $measure3->id, "alphanumeric" => "High"));
MeasureRange::create(array("measure_id" => $measure3->id, "alphanumeric" => "Low"));
MeasureRange::create(array("measure_id" => $measure3->id, "alphanumeric" => "Normal"));
MeasureRange::create(array("measure_id" => $measure4->id, "alphanumeric" => "High"));
MeasureRange::create(array("measure_id" => $measure4->id, "alphanumeric" => "Low"));
MeasureRange::create(array("measure_id" => $measure4->id, "alphanumeric" => "Normal"));
MeasureRange::create(array("measure_id" => $measure5->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure5->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure6->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure6->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure7->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure7->id, "alphanumeric" => "Negative"));
$measures = array(array("measure_type_id" => "1", "name" => "URIC ACID", "unit" => "mg/dl"), array("measure_type_id" => "4", "name" => "CSF for biochemistry", "unit" => ""), array("measure_type_id" => "4", "name" => "PSA", "unit" => ""), array("measure_type_id" => "1", "name" => "Total", "unit" => "mg/dl"), array("measure_type_id" => "1", "name" => "Alkaline Phosphate", "unit" => "u/l"), array("measure_type_id" => "1", "name" => "Direct", "unit" => "mg/dl"), array("measure_type_id" => "1", "name" => "Total Proteins", "unit" => ""), array("measure_type_id" => "4", "name" => "LFTS", "unit" => "NULL"), array("measure_type_id" => "1", "name" => "Chloride", "unit" => "mmol/l"), array("measure_type_id" => "1", "name" => "Potassium", "unit" => "mmol/l"), array("measure_type_id" => "1", "name" => "Sodium", "unit" => "mmol/l"), array("measure_type_id" => "4", "name" => "Electrolytes", "unit" => ""), array("measure_type_id" => "1", "name" => "Creatinine", "unit" => "mg/dl"), array("measure_type_id" => "1", "name" => "Urea", "unit" => "mg/dl"), array("measure_type_id" => "4", "name" => "RFTS", "unit" => ""), array("measure_type_id" => "4", "name" => "TFT", "unit" => ""));
foreach ($measures as $measure) {
Measure::create($measure);
}
$measureGXM = Measure::create(array("measure_type_id" => "4", "name" => "GXM", "unit" => ""));
$measureBG = Measure::create(array("measure_type_id" => "2", "name" => "Blood Grouping", "unit" => ""));
MeasureRange::create(array("measure_id" => $measureBG->id, "alphanumeric" => "O-"));
MeasureRange::create(array("measure_id" => $measureBG->id, "alphanumeric" => "O+"));
MeasureRange::create(array("measure_id" => $measureBG->id, "alphanumeric" => "A-"));
MeasureRange::create(array("measure_id" => $measureBG->id, "alphanumeric" => "A+"));
MeasureRange::create(array("measure_id" => $measureBG->id, "alphanumeric" => "B-"));
MeasureRange::create(array("measure_id" => $measureBG->id, "alphanumeric" => "B+"));
MeasureRange::create(array("measure_id" => $measureBG->id, "alphanumeric" => "AB-"));
MeasureRange::create(array("measure_id" => $measureBG->id, "alphanumeric" => "AB+"));
$measureHB = Measure::create(array("measure_type_id" => Measure::NUMERIC, "name" => "HB", "unit" => "g/dL"));
$measuresUrinalysisData = array(array("measure_type_id" => "4", "name" => "Urine microscopy", "unit" => ""), array("measure_type_id" => "4", "name" => "Pus cells", "unit" => ""), array("measure_type_id" => "4", "name" => "S. haematobium", "unit" => ""), array("measure_type_id" => "4", "name" => "T. vaginalis", "unit" => ""), array("measure_type_id" => "4", "name" => "Yeast cells", "unit" => ""), array("measure_type_id" => "4", "name" => "Red blood cells", "unit" => ""), array("measure_type_id" => "4", "name" => "Bacteria", "unit" => ""), array("measure_type_id" => "4", "name" => "Spermatozoa", "unit" => ""), array("measure_type_id" => "4", "name" => "Epithelial cells", "unit" => ""), array("measure_type_id" => "4", "name" => "ph", "unit" => ""), array("measure_type_id" => "4", "name" => "Urine chemistry", "unit" => ""), array("measure_type_id" => "4", "name" => "Glucose", "unit" => ""), array("measure_type_id" => "4", "name" => "Ketones", "unit" => ""), array("measure_type_id" => "4", "name" => "Proteins", "unit" => ""), array("measure_type_id" => "4", "name" => "Blood", "unit" => ""), array("measure_type_id" => "4", "name" => "Bilirubin", "unit" => ""), array("measure_type_id" => "4", "name" => "Urobilinogen Phenlpyruvic acid", "unit" => ""), array("measure_type_id" => "4", "name" => "pH", "unit" => ""));
foreach ($measuresUrinalysisData as $measureU) {
$measuresUrinalysis[] = Measure::create($measureU);
}
$measuresWBCData = array(array("measure_type_id" => Measure::NUMERIC, "name" => "WBC", "unit" => "x10³/µL"), array("measure_type_id" => Measure::NUMERIC, "name" => "Lym", "unit" => "L"), array("measure_type_id" => Measure::NUMERIC, "name" => "Mon", "unit" => "*"), array("measure_type_id" => Measure::NUMERIC, "name" => "Neu", "unit" => "*"), array("measure_type_id" => Measure::NUMERIC, "name" => "Eos", "unit" => ""), array("measure_type_id" => Measure::NUMERIC, "name" => "Baso", "unit" => ""));
foreach ($measuresWBCData as $value) {
$measuresWBC[] = Measure::create($value);
}
$measureRangesWBC = array(array("measure_id" => $measuresWBC[0]->id, "age_min" => 0, "age_max" => 100, "gender" => MeasureRange::BOTH, "range_lower" => 4, "range_upper" => 11), array("measure_id" => $measuresWBC[1]->id, "age_min" => 0, "age_max" => 100, "gender" => MeasureRange::BOTH, "range_lower" => 1.5, "range_upper" => 4), array("measure_id" => $measuresWBC[2]->id, "age_min" => 0, "age_max" => 100, "gender" => MeasureRange::BOTH, "range_lower" => 0.1, "range_upper" => 9), array("measure_id" => $measuresWBC[3]->id, "age_min" => 0, "age_max" => 100, "gender" => MeasureRange::BOTH, "range_lower" => 2.5, "range_upper" => 7), array("measure_id" => $measuresWBC[4]->id, "age_min" => 0, "age_max" => 100, "gender" => MeasureRange::BOTH, "range_lower" => 0, "range_upper" => 6), array("measure_id" => $measuresWBC[5]->id, "age_min" => 0, "age_max" => 100, "gender" => MeasureRange::BOTH, "range_lower" => 0, "range_upper" => 2));
foreach ($measureRangesWBC as $value) {
MeasureRange::create($value);
}
$this->command->info('measures seeded');
/* Test Types table */
$testTypeBS = TestType::create(array("name" => "BS for mps", "test_category_id" => $test_categories->id, "orderable_test" => 1));
$testTypeStoolCS = TestType::create(array("name" => "Stool for C/S", "test_category_id" => $lab_section_microbiology->id));
$testTypeGXM = TestType::create(array("name" => "GXM", "test_category_id" => $test_categories->id));
$testTypeHB = TestType::create(array("name" => "HB", "test_category_id" => $test_categories->id, "orderable_test" => 1));
$testTypeUrinalysis = TestType::create(array("name" => "Urinalysis", "test_category_id" => $test_categories->id));
$testTypeWBC = TestType::create(array("name" => "WBC", "test_category_id" => $test_categories->id));
$this->command->info('test_types seeded');
/* TestType Measure table */
TestTypeMeasure::create(array("test_type_id" => $testTypeBS->id, "measure_id" => $measureBSforMPS->id));
TestTypeMeasure::create(array("test_type_id" => $testTypeGXM->id, "measure_id" => $measureGXM->id));
TestTypeMeasure::create(array("test_type_id" => $testTypeGXM->id, "measure_id" => $measureBG->id));
TestTypeMeasure::create(array("test_type_id" => $testTypeHB->id, "measure_id" => $measureHB->id));
foreach ($measuresUrinalysis as $value) {
TestTypeMeasure::create(array("test_type_id" => $testTypeUrinalysis->id, "measure_id" => $value->id));
}
foreach ($measuresWBC as $value) {
TestTypeMeasure::create(array("test_type_id" => $testTypeWBC->id, "measure_id" => $value->id));
}
$this->command->info('testtype_measures seeded');
/* testtype_specimentypes table */
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeBS->id, "specimen_type_id" => $specTypes[count($specTypes) - 1]->id));
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeGXM->id, "specimen_type_id" => $specTypes[count($specTypes) - 1]->id));
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeHB->id, "specimen_type_id" => $specTypes[count($specTypes) - 1]->id));
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeHB->id, "specimen_type_id" => $specTypes[6]->id));
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeHB->id, "specimen_type_id" => $specTypes[7]->id));
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeHB->id, "specimen_type_id" => $specTypes[12]->id));
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeUrinalysis->id, "specimen_type_id" => $specTypes[19]->id));
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeUrinalysis->id, "specimen_type_id" => $specTypes[20]->id));
DB::table('testtype_specimentypes')->insert(array("test_type_id" => $testTypeWBC->id, "specimen_type_id" => $specTypes[count($specTypes) - 1]->id));
$this->command->info('testtype_specimentypes seeded');
/* Patients table */
$patients_array = array(array("name" => "Jam Felicia", "email" => "*****@*****.**", "patient_number" => "1002", "dob" => "2000-01-01", "gender" => "1", "created_by" => "2"), array("name" => "Emma Wallace", "email" => "*****@*****.**", "patient_number" => "1003", "dob" => "1990-03-01", "gender" => "1", "created_by" => "2"), array("name" => "Jack Tee", "email" => "*****@*****.**", "patient_number" => "1004", "dob" => "1999-12-18", "gender" => "0", "created_by" => "1"), array("name" => "Hu Jintao", "email" => "*****@*****.**", "patient_number" => "1005", "dob" => "1956-10-28", "gender" => "0", "created_by" => "2"), array("name" => "Lance Opiyo", "email" => "*****@*****.**", "patient_number" => "2150", "dob" => "2012-01-01", "gender" => "0", "created_by" => "1"));
foreach ($patients_array as $pat) {
$patients[] = Patient::create($pat);
}
$this->command->info('patients seeded');
/* Test Phase table */
$test_phases = array(array("id" => "1", "name" => "Pre-Analytical"), array("id" => "2", "name" => "Analytical"), array("id" => "3", "name" => "Post-Analytical"));
foreach ($test_phases as $test_phase) {
TestPhase::create($test_phase);
}
$this->command->info('test_phases seeded');
/* Test Status table */
$test_statuses = array(array("id" => "1", "name" => "not-received", "test_phase_id" => "1"), array("id" => "2", "name" => "pending", "test_phase_id" => "1"), array("id" => "3", "name" => "started", "test_phase_id" => "2"), array("id" => "4", "name" => "completed", "test_phase_id" => "3"), array("id" => "5", "name" => "verified", "test_phase_id" => "3"));
foreach ($test_statuses as $test_status) {
TestStatus::create($test_status);
}
$this->command->info('test_statuses seeded');
/* Specimen Status table */
$specimen_statuses = array(array("id" => "1", "name" => "specimen-not-collected"), array("id" => "2", "name" => "specimen-accepted"), array("id" => "3", "name" => "specimen-rejected"));
foreach ($specimen_statuses as $specimen_status) {
SpecimenStatus::create($specimen_status);
}
$this->command->info('specimen_statuses seeded');
/* Visits table */
for ($i = 0; $i < 7; $i++) {
$visits[] = Visit::create(array("patient_id" => $patients[rand(0, count($patients) - 1)]->id));
}
$this->command->info('visits seeded');
/* Rejection Reasons table */
$rejection_reasons_array = array(array("reason" => "Poorly labelled"), array("reason" => "Over saturation"), array("reason" => "Insufficient Sample"), array("reason" => "Scattered"), array("reason" => "Clotted Blood"), array("reason" => "Two layered spots"), array("reason" => "Serum rings"), array("reason" => "Scratched"), array("reason" => "Haemolysis"), array("reason" => "Spots that cannot elute"), array("reason" => "Leaking"), array("reason" => "Broken Sample Container"), array("reason" => "Mismatched sample and form labelling"), array("reason" => "Missing Labels on container and tracking form"), array("reason" => "Empty Container"), array("reason" => "Samples without tracking forms"), array("reason" => "Poor transport"), array("reason" => "Lipaemic"), array("reason" => "Wrong container/Anticoagulant"), array("reason" => "Request form without samples"), array("reason" => "Missing collection date on specimen / request form."), array("reason" => "Name and signature of requester missing"), array("reason" => "Mismatched information on request form and specimen container."), array("reason" => "Request form contaminated with specimen"), array("reason" => "Duplicate specimen received"), array("reason" => "Delay between specimen collection and arrival in the laboratory"), array("reason" => "Inappropriate specimen packing"), array("reason" => "Inappropriate specimen for the test"), array("reason" => "Inappropriate test for the clinical condition"), array("reason" => "No Label"), array("reason" => "Leaking"), array("reason" => "No Sample in the Container"), array("reason" => "No Request Form"), array("reason" => "Missing Information Required"));
foreach ($rejection_reasons_array as $rejection_reason) {
$rejection_reasons[] = RejectionReason::create($rejection_reason);
}
$this->command->info('rejection_reasons seeded');
/* Specimen table */
$this->command->info('specimens seeded');
$now = new DateTime();
/* Test table */
Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeBS->id, "specimen_id" => $this->createSpecimen(Test::NOT_RECEIVED, Specimen::NOT_COLLECTED, SpecimenType::all()->last()->id, $userTechnologist->id), "test_status_id" => Test::NOT_RECEIVED, "requested_by" => "Dr. Abou Meyang", "created_by" => $userTechnologist->id));
Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeHB->id, "specimen_id" => $this->createSpecimen(Test::PENDING, Specimen::NOT_COLLECTED, SpecimenType::all()->last()->id, $userTechnologist->id), "test_status_id" => Test::PENDING, "requested_by" => "Dr. Abou Meyang", "created_by" => $userTechnologist->id));
Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeGXM->id, "specimen_id" => $this->createSpecimen(Test::PENDING, Specimen::NOT_COLLECTED, SpecimenType::all()->last()->id, $userTechnologist->id), "test_status_id" => Test::PENDING, "requested_by" => "Dr. Abou Meyang", "created_by" => $userTechnologist->id));
Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeBS->id, "specimen_id" => $this->createSpecimen(Test::PENDING, Specimen::ACCEPTED, SpecimenType::all()->last()->id, $userTechnologist->id), "test_status_id" => Test::PENDING, "created_by" => $userTechnologist->id, "requested_by" => "Dr. Abou Meyang"));
$test_gxm_accepted_completed = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeGXM->id, "specimen_id" => $this->createSpecimen(Test::COMPLETED, Specimen::ACCEPTED, SpecimenType::all()->last()->id, $userTechnologist->id), "interpretation" => "Perfect match.", "test_status_id" => Test::COMPLETED, "created_by" => $userTechnologist->id, "tested_by" => $userTechnologist->id, "requested_by" => "Dr. Abou Meyang", "time_started" => $now->format('Y-m-d H:i:s'), "time_completed" => $now->add(new DateInterval('PT12M8S'))->format('Y-m-d H:i:s')));
$test_hb_accepted_completed = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeHB->id, "specimen_id" => $this->createSpecimen(Test::COMPLETED, Specimen::ACCEPTED, SpecimenType::all()->last()->id, $userTechnologist->id), "interpretation" => "Do nothing!", "test_status_id" => Test::COMPLETED, "created_by" => $userTechnologist->id, "tested_by" => $userTechnologist->id, "requested_by" => "Genghiz Khan", "time_started" => $now->format('Y-m-d H:i:s'), "time_completed" => $now->add(new DateInterval('PT5M23S'))->format('Y-m-d H:i:s')));
$tests_accepted_started = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeGXM->id, "specimen_id" => $this->createSpecimen(Test::STARTED, Specimen::ACCEPTED, SpecimenType::all()->last()->id, $userTechnologist->id), "test_status_id" => Test::STARTED, "requested_by" => "Dr. Abou Meyang", "created_by" => $userTechnologist->id, "time_started" => $now->format('Y-m-d H:i:s')));
$tests_accepted_completed = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeBS->id, "specimen_id" => $this->createSpecimen(Test::COMPLETED, Specimen::ACCEPTED, SpecimenType::all()->last()->id, $userTechnologist->id), "interpretation" => "Positive", "test_status_id" => Test::COMPLETED, "created_by" => $userTechnologist->id, "tested_by" => $userTechnologist->id, "requested_by" => "Ariel Smith", "time_started" => $now->format('Y-m-d H:i:s'), "time_completed" => $now->add(new DateInterval('PT7M34S'))->format('Y-m-d H:i:s')));
$tests_accepted_verified = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeBS->id, "specimen_id" => $this->createSpecimen(Test::VERIFIED, Specimen::ACCEPTED, SpecimenType::all()->last()->id, $userTechnologist->id), "interpretation" => "Very high concentration of parasites.", "test_status_id" => Test::VERIFIED, "created_by" => $userTechnologist->id, "tested_by" => $userTechnologist->id, "verified_by" => $userTechnologist->id, "requested_by" => "Genghiz Khan", "time_started" => $now, "time_completed" => $now->add(new DateInterval('PT5M17S'))->format('Y-m-d H:i:s'), "time_verified" => $now->add(new DateInterval('PT112M33S'))->format('Y-m-d H:i:s')));
$tests_rejected_pending = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeBS->id, "specimen_id" => $this->createSpecimen(Test::PENDING, Specimen::REJECTED, SpecimenType::all()->last()->id, $userTechnologist->id, $userTechnologist->id, $rejection_reasons[rand(0, count($rejection_reasons) - 1)]->id), "test_status_id" => Test::PENDING, "requested_by" => "Dr. Abou Meyang", "created_by" => $userTechnologist->id, "time_started" => $now->format('Y-m-d H:i:s')));
// WBC Started
Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeWBC->id, "specimen_id" => $this->createSpecimen(Test::STARTED, Specimen::ACCEPTED, SpecimenType::all()->last()->id, $userTechnologist->id), "test_status_id" => Test::PENDING, "requested_by" => "Fred Astaire", "created_by" => $userTechnologist->id));
$tests_rejected_started = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeBS->id, "specimen_id" => $this->createSpecimen(Test::STARTED, Specimen::REJECTED, SpecimenType::all()->last()->id, $userTechnologist->id, $userTechnologist->id, $rejection_reasons[rand(0, count($rejection_reasons) - 1)]->id), "test_status_id" => Test::STARTED, "created_by" => $userTechnologist->id, "requested_by" => "Bony Em", "time_started" => $now->format('Y-m-d H:i:s')));
$tests_rejected_completed = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeBS->id, "specimen_id" => $this->createSpecimen(Test::COMPLETED, Specimen::REJECTED, SpecimenType::all()->last()->id, $userTechnologist->id, $userTechnologist->id, $rejection_reasons[rand(0, count($rejection_reasons) - 1)]->id), "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => $userTechnologist->id, "tested_by" => $userTechnologist->id, "requested_by" => "Ed Buttler", "time_started" => $now->format('Y-m-d H:i:s'), "time_completed" => $now->add(new DateInterval('PT30M4S'))->format('Y-m-d H:i:s')));
Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeUrinalysis->id, "specimen_id" => $this->createSpecimen(Test::PENDING, Specimen::NOT_COLLECTED, SpecimenType::all()->last()->id, $userTechnologist->id), "test_status_id" => Test::PENDING, "requested_by" => "Dr. Abou Meyang", "created_by" => $userTechnologist->id));
Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeWBC->id, "specimen_id" => $this->createSpecimen(Test::PENDING, Specimen::NOT_COLLECTED, SpecimenType::all()->last()->id, $userTechnologist->id), "test_status_id" => Test::PENDING, "requested_by" => "Dr. Abou Meyang", "created_by" => $userTechnologist->id));
$test_urinalysis_accepted_completed = Test::create(array("visit_id" => $visits[rand(0, count($visits) - 1)]->id, "test_type_id" => $testTypeUrinalysis->id, "specimen_id" => $this->createSpecimen(Test::COMPLETED, Specimen::ACCEPTED, SpecimenType::all()->last()->id, $userTechnologist->id), "interpretation" => "Whats this !!!! ###%%% ^ *() /", "test_status_id" => Test::COMPLETED, "created_by" => $userTechnologist->id, "tested_by" => $userTechnologist->id, "requested_by" => "Dr. Abou Meyang", "time_started" => $now->format('Y-m-d H:i:s'), "time_completed" => $now->add(new DateInterval('PT12M8S'))->format('Y-m-d H:i:s'), "external_id" => 596699));
$this->command->info('tests seeded');
/* Test Results table */
$testResults = array(array("test_id" => $tests_accepted_verified->id, "measure_id" => $measureBSforMPS->id, "result" => "+++"), array("test_id" => $tests_accepted_completed->id, "measure_id" => $measureBSforMPS->id, "result" => "++"), array("test_id" => $test_gxm_accepted_completed->id, "measure_id" => $measureGXM->id, "result" => "COMPATIBLE WITH 061832914 B/G A POS.EXPIRY19/8/14"), array("test_id" => $test_gxm_accepted_completed->id, "measure_id" => $measureBG->id, "result" => "A+"), array("test_id" => $test_hb_accepted_completed->id, "measure_id" => $measureHB->id, "result" => "13.7"), array("test_id" => $tests_rejected_completed->id, "measure_id" => $measureBSforMPS->id, "result" => "No mps seen"));
foreach ($measuresUrinalysis as $key => $measure) {
$testResults[] = array("test_id" => $test_urinalysis_accepted_completed->id, "measure_id" => $measure->id, "result" => $key . "50");
}
foreach ($testResults as $testResult) {
TestResult::create($testResult);
}
$this->command->info('test results seeded');
/* Permissions table */
$permissions = array(array("name" => "view_names", "display_name" => "Can view patient names"), array("name" => "manage_patients", "display_name" => "Can add patients"), array("name" => "receive_external_test", "display_name" => "Can receive test requests"), array("name" => "request_test", "display_name" => "Can request new test"), array("name" => "accept_test_specimen", "display_name" => "Can accept test specimen"), array("name" => "reject_test_specimen", "display_name" => "Can reject test specimen"), array("name" => "change_test_specimen", "display_name" => "Can change test specimen"), array("name" => "start_test", "display_name" => "Can start tests"), array("name" => "enter_test_results", "display_name" => "Can enter tests results"), array("name" => "edit_test_results", "display_name" => "Can edit test results"), array("name" => "verify_test_results", "display_name" => "Can verify test results"), array("name" => "send_results_to_external_system", "display_name" => "Can send test results to external systems"), array("name" => "refer_specimens", "display_name" => "Can refer specimens"), array("name" => "manage_users", "display_name" => "Can manage users"), array("name" => "manage_test_catalog", "display_name" => "Can manage test catalog"), array("name" => "manage_lab_configurations", "display_name" => "Can manage lab configurations"), array("name" => "view_reports", "display_name" => "Can view reports"), array("name" => "manage_inventory", "display_name" => "Can manage inventory"), array("name" => "request_topup", "display_name" => "Can request top-up"), array("name" => "manage_qc", "display_name" => "Can manage Quality Control"));
foreach ($permissions as $permission) {
Permission::create($permission);
}
$this->command->info('Permissions table seeded');
/* Roles table */
$roles = array(array("name" => "Superadmin"), array("name" => "Technologist"), array("name" => "Receptionist"));
foreach ($roles as $role) {
Role::create($role);
}
$this->command->info('Roles table seeded');
$user1 = User::find(1);
$role1 = Role::find(1);
$permissions = Permission::all();
//Assign all permissions to role administrator
foreach ($permissions as $permission) {
$role1->attachPermission($permission);
}
//Assign role Administrator to user 1 administrator
$user1->attachRole($role1);
/* Instruments table */
$instrumentsData = array("name" => "Celltac F Mek 8222", "description" => "Automatic analyzer with 22 parameters and WBC 5 part diff Hematology Analyzer", "driver_name" => "KBLIS\\Plugins\\CelltacFMachine", "ip" => "192.168.1.12", "hostname" => "HEMASERVER");
$instrument = Instrument::create($instrumentsData);
$instrument->testTypes()->attach(array($testTypeWBC->id));
$this->command->info('Instruments table seeded');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596699,"parentLabNo":0,"requestingClinician":"frankenstein Dr",
"investigation":"Urinalysis","requestDate":"2014-10-14 10:20:35","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596700,"parentLabNo":596699,"requestingClinician":"frankenstein Dr",
"investigation":"Urine microscopy","requestDate":"2014-10-14 10:20:35","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596701,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"Pus cells","requestDate":"2014-10-14 10:20:35","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596702,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"S. haematobium","requestDate":"2014-10-14 10:20:35","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596703,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"T. vaginalis","requestDate":"2014-10-14 10:20:35","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596704,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"Yeast cells","requestDate":"2014-10-14 10:20:35","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596705,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"Red blood cells","requestDate":"2014-10-14 10:20:35","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596706,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"Bacteria","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596707,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"Spermatozoa","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596708,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"Epithelial cells","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596709,"parentLabNo":596700,"requestingClinician":"frankenstein Dr",
"investigation":"ph","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596710,"parentLabNo":596699,"requestingClinician":"frankenstein Dr",
"investigation":"Urine chemistry","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596711,"parentLabNo":596710,"requestingClinician":"frankenstein Dr",
"investigation":"Glucose","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596712,"parentLabNo":596710,"requestingClinician":"frankenstein Dr",
"investigation":"Ketones","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596713,"parentLabNo":596710,"requestingClinician":"frankenstein Dr",
"investigation":"Proteins","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596714,"parentLabNo":596710,"requestingClinician":"frankenstein Dr",
"investigation":"Blood","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596715,"parentLabNo":596710,"requestingClinician":"frankenstein Dr",
"investigation":"Bilirubin","requestDate":"2014-10-14 10:20:36","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596716,"parentLabNo":596710,"requestingClinician":"frankenstein Dr",
"investigation":"Urobilinogen Phenlpyruvic acid","requestDate":"2014-10-14 10:20:37","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
$labRequestUrinalysis[] = json_decode('{"cost":null,"receiptNumber":null,"receiptType":null,"labNo":596717,"parentLabNo":596710,"requestingClinician":"frankenstein Dr",
"investigation":"pH","requestDate":"2014-10-14 10:20:37","orderStage":"ip","patientVisitNumber":643660,"patient":{"id":326983,
"fullName":"Macau Macau","dateOfBirth":"1996-10-09 00:00:00","gender":"Female"},"address":{"address":null,"postalCode":null,"phoneNumber":"","city":null}}');
for ($i = 0; $i < count($labRequestUrinalysis); $i++) {
$dumper = new ExternalDump();
$dumper->lab_no = $labRequestUrinalysis[$i]->labNo;
$dumper->parent_lab_no = $labRequestUrinalysis[$i]->parentLabNo;
$dumper->test_id = $i == 0 ? $test_urinalysis_accepted_completed->id : null;
$dumper->requesting_clinician = $labRequestUrinalysis[$i]->requestingClinician;
$dumper->investigation = $labRequestUrinalysis[$i]->investigation;
$dumper->provisional_diagnosis = '';
$dumper->request_date = $labRequestUrinalysis[$i]->requestDate;
$dumper->order_stage = $labRequestUrinalysis[$i]->orderStage;
$dumper->patient_visit_number = $labRequestUrinalysis[$i]->patientVisitNumber;
$dumper->patient_id = $labRequestUrinalysis[$i]->patient->id;
$dumper->full_name = $labRequestUrinalysis[$i]->patient->fullName;
$dumper->dob = $labRequestUrinalysis[$i]->patient->dateOfBirth;
$dumper->gender = $labRequestUrinalysis[$i]->patient->gender;
$dumper->address = $labRequestUrinalysis[$i]->address->address;
$dumper->postal_code = '';
$dumper->phone_number = $labRequestUrinalysis[$i]->address->phoneNumber;
$dumper->city = $labRequestUrinalysis[$i]->address->city;
$dumper->cost = $labRequestUrinalysis[$i]->cost;
$dumper->receipt_number = $labRequestUrinalysis[$i]->receiptNumber;
$dumper->receipt_type = $labRequestUrinalysis[$i]->receiptType;
$dumper->waiver_no = '';
$dumper->system_id = "sanitas";
$dumper->save();
}
$this->command->info('ExternalDump table seeded');
// Begin seed for prevalence rates report
/* Test Categories table - These map on to the lab sections */
$lab_section_hematology = TestCategory::create(array("name" => "HEMATOLOGY", "description" => ""));
$lab_section_serology = TestCategory::create(array("name" => "SEROLOGY", "description" => ""));
$lab_section_trans = TestCategory::create(array("name" => "BLOOD TRANSFUSION", "description" => ""));
$this->command->info('Lab Sections seeded');
/* Test Types for prevalence */
$test_types_salmonella = TestType::create(array("name" => "Salmonella Antigen Test", "test_category_id" => $test_categories->id));
$test_types_direct = TestType::create(array("name" => "Direct COOMBS Test", "test_category_id" => $lab_section_trans->id));
$test_types_du = TestType::create(array("name" => "DU Test", "test_category_id" => $lab_section_trans->id));
$test_types_sickling = TestType::create(array("name" => "Sickling Test", "test_category_id" => $lab_section_hematology->id));
$test_types_borrelia = TestType::create(array("name" => "Borrelia", "test_category_id" => $test_categories->id));
$test_types_vdrl = TestType::create(array("name" => "VDRL", "test_category_id" => $lab_section_serology->id));
$test_types_pregnancy = TestType::create(array("name" => "Pregnancy Test", "test_category_id" => $lab_section_serology->id));
$test_types_brucella = TestType::create(array("name" => "Brucella", "test_category_id" => $lab_section_serology->id));
$test_types_pylori = TestType::create(array("name" => "H. Pylori", "test_category_id" => $lab_section_serology->id));
$this->command->info('Test Types seeded');
/* Test Types and specimen types relationship for prevalence */
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_salmonella->id, "13"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_direct->id, "23"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_du->id, "23"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_sickling->id, "23"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_borrelia->id, "23"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_vdrl->id, "13"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_pregnancy->id, "20"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_brucella->id, "13"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($test_types_pylori->id, "13"));
DB::insert('INSERT INTO testtype_specimentypes (test_type_id, specimen_type_id) VALUES (?, ?)', array($testTypeStoolCS->id, "16"));
$this->command->info('TestTypes/SpecimenTypes seeded');
/*New measures for prevalence*/
$measure_salmonella = Measure::create(array("measure_type_id" => "2", "name" => "Salmonella Antigen Test", "unit" => ""));
$measure_direct = Measure::create(array("measure_type_id" => "2", "name" => "Direct COOMBS Test", "unit" => ""));
$measure_du = Measure::create(array("measure_type_id" => "2", "name" => "Du Test", "unit" => ""));
$measure_sickling = Measure::create(array("measure_type_id" => "2", "name" => "Sickling Test", "unit" => ""));
$measure_borrelia = Measure::create(array("measure_type_id" => "2", "name" => "Borrelia", "unit" => ""));
$measure_vdrl = Measure::create(array("measure_type_id" => "2", "name" => "VDRL", "unit" => ""));
$measure_pregnancy = Measure::create(array("measure_type_id" => "2", "name" => "Pregnancy Test", "unit" => ""));
$measure_brucella = Measure::create(array("measure_type_id" => "2", "name" => "Brucella", "unit" => ""));
$measure_pylori = Measure::create(array("measure_type_id" => "2", "name" => "H. Pylori", "unit" => ""));
MeasureRange::create(array("measure_id" => $measure_salmonella->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_salmonella->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure_direct->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_direct->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure_du->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_du->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure_sickling->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_sickling->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure_borrelia->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_borrelia->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure_vdrl->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_vdrl->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure_pregnancy->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_pregnancy->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure_brucella->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_brucella->id, "alphanumeric" => "Negative"));
MeasureRange::create(array("measure_id" => $measure_pylori->id, "alphanumeric" => "Positive"));
MeasureRange::create(array("measure_id" => $measure_pylori->id, "alphanumeric" => "Negative"));
$this->command->info('Measures seeded again');
/* TestType Measure for prevalence */
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_salmonella->id, "measure_id" => $measure_salmonella->id));
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_direct->id, "measure_id" => $measure_direct->id));
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_du->id, "measure_id" => $measure_du->id));
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_sickling->id, "measure_id" => $measure_sickling->id));
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_borrelia->id, "measure_id" => $measure_borrelia->id));
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_vdrl->id, "measure_id" => $measure_vdrl->id));
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_pregnancy->id, "measure_id" => $measure_pregnancy->id));
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_brucella->id, "measure_id" => $measure_brucella->id));
$testtype_measure = TestTypeMeasure::create(array("test_type_id" => $test_types_pylori->id, "measure_id" => $measure_pylori->id));
$this->command->info('Test Type Measures seeded again');
/* Tests for prevalence rates */
$tests_completed_one = Test::create(array("visit_id" => "1", "test_type_id" => $test_types_salmonella->id, "specimen_id" => "4", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-07-23 15:16:15", "time_started" => "2014-07-23 16:07:15", "time_completed" => "2014-07-23 16:17:19"));
$tests_completed_two = Test::create(array("visit_id" => "2", "test_type_id" => $test_types_direct->id, "specimen_id" => "3", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-07-26 10:16:15", "time_started" => "2014-07-26 13:27:15", "time_completed" => "2014-07-26 13:57:01"));
$tests_completed_three = Test::create(array("visit_id" => "3", "test_type_id" => $test_types_du->id, "specimen_id" => "2", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-08-13 09:16:15", "time_started" => "2014-08-13 10:07:15", "time_completed" => "2014-08-13 10:18:11"));
$tests_completed_four = Test::create(array("visit_id" => "4", "test_type_id" => $test_types_sickling->id, "specimen_id" => "1", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-08-16 09:06:53", "time_started" => "2014-08-16 09:09:15", "time_completed" => "2014-08-16 09:23:37"));
$tests_completed_five = Test::create(array("visit_id" => "5", "test_type_id" => $test_types_borrelia->id, "specimen_id" => "1", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-08-23 10:16:15", "time_started" => "2014-08-23 11:54:39", "time_completed" => "2014-08-23 12:07:18"));
$tests_completed_six = Test::create(array("visit_id" => "6", "test_type_id" => $test_types_vdrl->id, "specimen_id" => "2", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-09-07 07:23:15", "time_started" => "2014-09-07 08:07:20", "time_completed" => "2014-09-07 08:41:13"));
$tests_completed_seven = Test::create(array("visit_id" => "7", "test_type_id" => $test_types_pregnancy->id, "specimen_id" => "3", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-10-03 11:52:15", "time_started" => "2014-10-03 12:31:04", "time_completed" => "2014-10-03 12:45:18"));
$tests_completed_eight = Test::create(array("visit_id" => "1", "test_type_id" => $test_types_brucella->id, "specimen_id" => "4", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-10-15 17:01:15", "time_started" => "2014-10-15 17:05:24", "time_completed" => "2014-10-15 18:07:15"));
$tests_completed_nine = Test::create(array("visit_id" => "2", "test_type_id" => $test_types_pylori->id, "specimen_id" => "4", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-10-23 16:06:15", "time_started" => "2014-10-23 16:07:15", "time_completed" => "2014-10-23 16:39:02"));
$tests_completed_ten = Test::create(array("visit_id" => "4", "test_type_id" => $test_types_salmonella->id, "specimen_id" => "3", "interpretation" => "Budda Boss", "test_status_id" => Test::COMPLETED, "created_by" => "2", "tested_by" => "3", "requested_by" => "Ariel Smith", "time_created" => "2014-10-21 19:16:15", "time_started" => "2014-10-21 19:17:15", "time_completed" => "2014-10-21 19:52:40"));
$tests_verified_one = Test::create(array("visit_id" => "3", "test_type_id" => $test_types_direct->id, "specimen_id" => "2", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-07-21 19:16:15", "time_started" => "2014-07-21 19:17:15", "time_completed" => "2014-07-21 19:52:40", "time_verified" => "2014-07-21 19:53:48"));
$tests_verified_two = Test::create(array("visit_id" => "2", "test_type_id" => $test_types_du->id, "specimen_id" => "1", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-08-21 19:16:15", "time_started" => "2014-08-21 19:17:15", "time_completed" => "2014-08-21 19:52:40", "time_verified" => "2014-08-21 19:53:48"));
$tests_verified_three = Test::create(array("visit_id" => "3", "test_type_id" => $test_types_sickling->id, "specimen_id" => "4", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-08-26 19:16:15", "time_started" => "2014-08-26 19:17:15", "time_completed" => "2014-08-26 19:52:40", "time_verified" => "2014-08-26 19:53:48"));
$tests_verified_four = Test::create(array("visit_id" => "4", "test_type_id" => $test_types_borrelia->id, "specimen_id" => "2", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-09-21 19:16:15", "time_started" => "2014-09-21 19:17:15", "time_completed" => "2014-09-21 19:52:40", "time_verified" => "2014-09-21 19:53:48"));
$tests_verified_five = Test::create(array("visit_id" => "1", "test_type_id" => $test_types_vdrl->id, "specimen_id" => "3", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-09-22 19:16:15", "time_started" => "2014-09-22 19:17:15", "time_completed" => "2014-09-22 19:52:40", "time_verified" => "2014-09-22 19:53:48"));
$tests_verified_six = Test::create(array("visit_id" => "1", "test_type_id" => $test_types_pregnancy->id, "specimen_id" => "4", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-09-23 19:16:15", "time_started" => "2014-09-23 19:17:15", "time_completed" => "2014-09-23 19:52:40", "time_verified" => "2014-09-23 19:53:48"));
$tests_verified_seven = Test::create(array("visit_id" => "1", "test_type_id" => $test_types_brucella->id, "specimen_id" => "2", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-09-27 19:16:15", "time_started" => "2014-09-27 19:17:15", "time_completed" => "2014-09-27 19:52:40", "time_verified" => "2014-09-27 19:53:48"));
$tests_verified_eight = Test::create(array("visit_id" => "3", "test_type_id" => $test_types_pylori->id, "specimen_id" => "4", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-10-22 19:16:15", "time_started" => "2014-10-22 19:17:15", "time_completed" => "2014-10-22 19:52:40", "time_verified" => "2014-10-22 19:53:48"));
$tests_verified_nine = Test::create(array("visit_id" => "4", "test_type_id" => $test_types_pregnancy->id, "specimen_id" => "3", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-10-17 19:16:15", "time_started" => "2014-10-17 19:17:15", "time_completed" => "2014-10-17 19:52:40", "time_verified" => "2014-10-17 19:53:48"));
$tests_verified_ten = Test::create(array("visit_id" => "2", "test_type_id" => $test_types_pregnancy->id, "specimen_id" => "1", "interpretation" => "Budda Boss", "test_status_id" => Test::VERIFIED, "created_by" => "3", "tested_by" => "2", "verified_by" => "3", "requested_by" => "Genghiz Khan", "time_created" => "2014-10-02 19:16:15", "time_started" => "2014-10-02 19:17:15", "time_completed" => "2014-10-02 19:52:40", "time_verified" => "2014-10-02 19:53:48"));
$this->command->info('Tests seeded again');
// Test results for prevalence
$results = array(array("test_id" => $tests_completed_one->id, "measure_id" => $measure_salmonella->id, "result" => "Positive"), array("test_id" => $tests_completed_two->id, "measure_id" => $measure_direct->id, "result" => "Positive"), array("test_id" => $tests_completed_three->id, "measure_id" => $measure_du->id, "result" => "Positive"), array("test_id" => $tests_completed_four->id, "measure_id" => $measure_sickling->id, "result" => "Positive"), array("test_id" => $tests_completed_five->id, "measure_id" => $measure_borrelia->id, "result" => "Positive"), array("test_id" => $tests_completed_six->id, "measure_id" => $measure_vdrl->id, "result" => "Positive"), array("test_id" => $tests_completed_seven->id, "measure_id" => $measure_pregnancy->id, "result" => "Positive"), array("test_id" => $tests_completed_eight->id, "measure_id" => $measure_brucella->id, "result" => "Positive"), array("test_id" => $tests_completed_nine->id, "measure_id" => $measure_pylori->id, "result" => "Positive"), array("test_id" => $tests_completed_ten->id, "measure_id" => $measure_salmonella->id, "result" => "Positive"), array("test_id" => $tests_verified_one->id, "measure_id" => $measure_direct->id, "result" => "Negative"), array("test_id" => $tests_verified_two->id, "measure_id" => $measure_du->id, "result" => "Positive"), array("test_id" => $tests_verified_three->id, "measure_id" => $measure_sickling->id, "result" => "Positive"), array("test_id" => $tests_verified_four->id, "measure_id" => $measure_borrelia->id, "result" => "Negative"), array("test_id" => $tests_verified_five->id, "measure_id" => $measure_vdrl->id, "result" => "Negative"), array("test_id" => $tests_verified_six->id, "measure_id" => $measure_pregnancy->id, "result" => "Negative"), array("test_id" => $tests_verified_seven->id, "measure_id" => $measure_brucella->id, "result" => "Positive"), array("test_id" => $tests_verified_eight->id, "measure_id" => $measure_pylori->id, "result" => "Positive"), array("test_id" => $tests_verified_nine->id, "measure_id" => $measure_pregnancy->id, "result" => "Negative"), array("test_id" => $tests_verified_ten->id, "measure_id" => $measure_pregnancy->id, "result" => "Positive"));
foreach ($results as $result) {
TestResult::create($result);
}
$this->command->info('Test results seeded again');
// End prevalence rates seed
//Seed for facilities
$facilitiesSeed = array(array('name' => "WALTER REED"), array('name' => "AGA KHAN UNIVERSITY HOSPITAL"), array('name' => "TEL AVIV GENERAL HOSPITAL"), array('name' => "GK PRISON DISPENSARY"), array('name' => "KEMRI ALUPE"), array('name' => "AMPATH"));
foreach ($facilitiesSeed as $facility) {
Facility::create($facility);
}
$this->command->info('Facilities table seeded');
//Seed for suppliers
$supplier = Supplier::create(array("name" => "CHEM-LABS LTD", "phone" => "+254 722 822 595", "email" => "*****@*****.**", "address" => "Human House, Ngara West Rd, Off Museum Hill. 23,\nP.o. Box 38779 – 00600,\nNairobi, Kenya.", "user_id" => 1));
$this->command->info('Suppliers table seeded');
//Seed for diseases
$malaria = Disease::create(array('name' => "Malaria"));
$typhoid = Disease::create(array('name' => "Typhoid"));
$dysentry = Disease::create(array('name' => "Shigella Dysentry"));
$this->command->info("Dieases table seeded");
$reportDiseases = array(array("test_type_id" => $testTypeBS->id, "disease_id" => $malaria->id), array("test_type_id" => $test_types_salmonella->id, "disease_id" => $typhoid->id), array("test_type_id" => $testTypeStoolCS->id, "disease_id" => $dysentry->id));
foreach ($reportDiseases as $reportDisease) {
ReportDisease::create($reportDisease);
}
$this->command->info("Report Disease table seeded");
//Seeding for QC
$lots = array(array('lot_no' => '0001', 'description' => 'First lot', 'expiry' => date('Y-m-d H:i:s', strtotime("+6 months"))), array('lot_no' => '0002', 'description' => 'Second lot', 'expiry' => date('Y-m-d H:i:s', strtotime("+7 months"))));
foreach ($lots as $lot) {
$lot = Lot::create($lot);
}
$this->command->info("Lot table seeded");
//Control seeding
$controls = array(array('name' => 'Humatrol P', 'description' => 'HUMATROL P control serum has been designed to provide a suitable basis for the quality control (imprecision, inaccuracy) in the clinical chemical laboratory.', 'instrument_id' => 1), array('name' => 'Full Blood Count', 'description' => 'Né pas touchér', 'instrument_id' => 1));
foreach ($controls as $control) {
Control::create($control);
}
$this->command->info("Control table seeded");
//Control measures
$controlMeasures = array(array('name' => 'ca', 'unit' => 'mmol', 'control_id' => 1, 'control_measure_type_id' => 1), array('name' => 'pi', 'unit' => 'mmol', 'control_id' => 1, 'control_measure_type_id' => 1), array('name' => 'mg', 'unit' => 'mmol', 'control_id' => 1, 'control_measure_type_id' => 1), array('name' => 'na', 'unit' => 'mmol', 'control_id' => 1, 'control_measure_type_id' => 1), array('name' => 'K', 'unit' => 'mmol', 'control_id' => 1, 'control_measure_type_id' => 1), array('name' => 'WBC', 'unit' => 'x 103/uL', 'control_id' => 2, 'control_measure_type_id' => 1), array('name' => 'RBC', 'unit' => 'x 106/uL', 'control_id' => 2, 'control_measure_type_id' => 1), array('name' => 'HGB', 'unit' => 'g/dl', 'control_id' => 2, 'control_measure_type_id' => 1), array('name' => 'HCT', 'unit' => '%', 'control_id' => 2, 'control_measure_type_id' => 1), array('name' => 'MCV', 'unit' => 'fl', 'control_id' => 2, 'control_measure_type_id' => 1), array('name' => 'MCH', 'unit' => 'pg', 'control_id' => 2, 'control_measure_type_id' => 1), array('name' => 'MCHC', 'unit' => 'g/dl', 'control_id' => 2, 'control_measure_type_id' => 1), array('name' => 'PLT', 'unit' => 'x 103/uL', 'control_id' => 2, 'control_measure_type_id' => 1));
foreach ($controlMeasures as $controlMeasure) {
ControlMeasure::create($controlMeasure);
}
$this->command->info("Control Measure table seeded");
//Control measure ranges
$controlMeasureRanges = array(array('upper_range' => '2.63', 'lower_range' => '7.19', 'control_measure_id' => 1), array('upper_range' => '11.65', 'lower_range' => '15.43', 'control_measure_id' => 2), array('upper_range' => '12.13', 'lower_range' => '19.11', 'control_measure_id' => 3), array('upper_range' => '15.73', 'lower_range' => '25.01', 'control_measure_id' => 4), array('upper_range' => '17.63', 'lower_range' => '20.12', 'control_measure_id' => 5), array('upper_range' => '6.5', 'lower_range' => '7.5', 'control_measure_id' => 6), array('upper_range' => '4.36', 'lower_range' => '5.78', 'control_measure_id' => 7), array('upper_range' => '13.8', 'lower_range' => '17.3', 'control_measure_id' => 8), array('upper_range' => '81.0', 'lower_range' => '95.0', 'control_measure_id' => 9), array('upper_range' => '1.99', 'lower_range' => '2.63', 'control_measure_id' => 10), array('upper_range' => '27.6', 'lower_range' => '33.0', 'control_measure_id' => 11), array('upper_range' => '32.8', 'lower_range' => '36.4', 'control_measure_id' => 12), array('upper_range' => '141', 'lower_range' => ' 320.0', 'control_measure_id' => 13));
foreach ($controlMeasureRanges as $controlMeasureRange) {
ControlMeasureRange::create($controlMeasureRange);
}
$this->command->info("Control Measure ranges table seeded");
//Control Tests
$controlTests = array(array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Msiska', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-10 days'))), array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Katayi', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-9 days'))), array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Msiska', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-8 days'))), array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Kweyu', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-7 days'))), array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Kweyu', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-6 days'))), array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Tiwonge', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-5 days'))), array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Mukulu', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-4 days'))), array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Tiwonge', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('control_id' => 1, 'lot_id' => 1, 'performed_by' => 'Tiwonge', 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))));
foreach ($controlTests as $controltest) {
ControlTest::create($controltest);
}
$this->command->info("Control test table seeded");
//Control results
$controlResults = array(array('results' => '2.78', 'control_measure_id' => 1, 'control_test_id' => 1, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-10 days'))), array('results' => '13.56', 'control_measure_id' => 2, 'control_test_id' => 1, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-10 days'))), array('results' => '14.77', 'control_measure_id' => 3, 'control_test_id' => 1, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-10 days'))), array('results' => '25.92', 'control_measure_id' => 4, 'control_test_id' => 1, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-10 days'))), array('results' => '18.87', 'control_measure_id' => 5, 'control_test_id' => 1, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-10 days'))), array('results' => '6.78', 'control_measure_id' => 1, 'control_test_id' => 2, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-9 days'))), array('results' => '15.56', 'control_measure_id' => 2, 'control_test_id' => 2, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-9 days'))), array('results' => '18.77', 'control_measure_id' => 3, 'control_test_id' => 2, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-9 days'))), array('results' => '30.92', 'control_measure_id' => 4, 'control_test_id' => 2, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-9 days'))), array('results' => '17.87', 'control_measure_id' => 5, 'control_test_id' => 2, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-9 days'))), array('results' => '8.78', 'control_measure_id' => 1, 'control_test_id' => 3, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-8 days'))), array('results' => '17.56', 'control_measure_id' => 2, 'control_test_id' => 3, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-8 days'))), array('results' => '21.77', 'control_measure_id' => 3, 'control_test_id' => 3, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-8 days'))), array('results' => '27.92', 'control_measure_id' => 4, 'control_test_id' => 3, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-8 days'))), array('results' => '22.87', 'control_measure_id' => 5, 'control_test_id' => 3, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-8 days'))), array('results' => '6.78', 'control_measure_id' => 1, 'control_test_id' => 4, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-7 days'))), array('results' => '18.56', 'control_measure_id' => 2, 'control_test_id' => 4, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-7 days'))), array('results' => '19.77', 'control_measure_id' => 3, 'control_test_id' => 4, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-7 days'))), array('results' => '12.92', 'control_measure_id' => 4, 'control_test_id' => 4, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-7 days'))), array('results' => '22.87', 'control_measure_id' => 5, 'control_test_id' => 4, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-7 days'))), array('results' => '3.78', 'control_measure_id' => 1, 'control_test_id' => 5, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-6 days'))), array('results' => '16.56', 'control_measure_id' => 2, 'control_test_id' => 5, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-6 days'))), array('results' => '17.77', 'control_measure_id' => 3, 'control_test_id' => 5, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-6 days'))), array('results' => '28.92', 'control_measure_id' => 4, 'control_test_id' => 5, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-6 days'))), array('results' => '19.87', 'control_measure_id' => 5, 'control_test_id' => 5, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-6 days'))), array('results' => '5.78', 'control_measure_id' => 1, 'control_test_id' => 6, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-5 days'))), array('results' => '15.56', 'control_measure_id' => 2, 'control_test_id' => 6, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-5 days'))), array('results' => '11.77', 'control_measure_id' => 3, 'control_test_id' => 6, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-5 days'))), array('results' => '29.92', 'control_measure_id' => 4, 'control_test_id' => 6, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-5 days'))), array('results' => '14.87', 'control_measure_id' => 5, 'control_test_id' => 6, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-5 days'))), array('results' => '9.78', 'control_measure_id' => 1, 'control_test_id' => 7, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-4 days'))), array('results' => '11.56', 'control_measure_id' => 2, 'control_test_id' => 7, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-4 days'))), array('results' => '19.77', 'control_measure_id' => 3, 'control_test_id' => 7, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-4 days'))), array('results' => '32.92', 'control_measure_id' => 4, 'control_test_id' => 7, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-4 days'))), array('results' => '29.87', 'control_measure_id' => 5, 'control_test_id' => 7, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-4 days'))), array('results' => '5.45', 'control_measure_id' => 6, 'control_test_id' => 8, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('results' => '5.01', 'control_measure_id' => 7, 'control_test_id' => 8, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('results' => '12.3', 'control_measure_id' => 8, 'control_test_id' => 8, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('results' => '89.7', 'control_measure_id' => 9, 'control_test_id' => 8, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('results' => '2.15', 'control_measure_id' => 10, 'control_test_id' => 8, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('results' => '34.0', 'control_measure_id' => 11, 'control_test_id' => 8, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('results' => '37.2', 'control_measure_id' => 12, 'control_test_id' => 8, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('results' => '141.5', 'control_measure_id' => 13, 'control_test_id' => 8, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-3 days'))), array('results' => '7.45', 'control_measure_id' => 6, 'control_test_id' => 9, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))), array('results' => '9.01', 'control_measure_id' => 7, 'control_test_id' => 9, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))), array('results' => '9.3', 'control_measure_id' => 8, 'control_test_id' => 9, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))), array('results' => '94.7', 'control_measure_id' => 9, 'control_test_id' => 9, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))), array('results' => '12.15', 'control_measure_id' => 10, 'control_test_id' => 9, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))), array('results' => '37.0', 'control_measure_id' => 11, 'control_test_id' => 9, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))), array('results' => '30.2', 'control_measure_id' => 12, 'control_test_id' => 9, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))), array('results' => '121.5', 'control_measure_id' => 13, 'control_test_id' => 9, 'user_id' => 1, 'created_at' => date('Y-m-d', strtotime('-2 days'))));
foreach ($controlResults as $controlResult) {
ControlMeasureResult::create($controlResult);
}
$this->command->info("Control results table seeded");
}
public function actionLog()
{
$visitor_id = $_POST['visitor_id'];
$visits = Visit::find()->where("visitor_id = {$visitor_id}")->all();
echo $this->renderPartial('log', ['visits' => $visits]);
}
/**
* Function for processing the requests we receive from the external system
* and putting the data into our system.
*
* @var array lab_requests
*/
public function process($labRequest)
{
//First: Check if patient exists, if true dont save again
$patient = Patient::where('external_patient_number', '=', $labRequest->patient->id)->get();
if (!$patient->first()) {
$patient = new Patient();
$patient->external_patient_number = $labRequest->patient->id;
$patient->patient_number = $labRequest->patient->id;
$patient->name = $labRequest->patient->fullName;
$gender = array('Male' => Patient::MALE, 'Female' => Patient::FEMALE);
$patient->gender = $gender[$labRequest->patient->gender];
$patient->dob = $labRequest->patient->dateOfBirth;
$patient->address = $labRequest->address->address;
$patient->phone_number = $labRequest->address->phoneNumber;
$patient->created_by = User::EXTERNAL_SYSTEM_USER;
$patient->save();
} else {
$patient = $patient->first();
}
//We check if the test exists in our system if not we just save the request in stagingTable
if ($labRequest->parentLabNo == '0') {
$testTypeId = TestType::getTestTypeIdByTestName($labRequest->investigation);
} else {
$testTypeId = null;
}
if (is_null($testTypeId) && $labRequest->parentLabNo == '0') {
$this->saveToExternalDump($labRequest, ExternalDump::TEST_NOT_FOUND);
return;
}
//Check if visit exists, if true dont save again
$visitType = array('ip' => 'In-patient', 'op' => 'Out-patient');
//Should be a constant
$visit = Visit::where('visit_number', '=', $labRequest->patientVisitNumber)->where('visit_type', '=', $visitType[$labRequest->orderStage])->get();
if (!$visit->first()) {
$visit = new Visit();
$visit->patient_id = $patient->id;
$visit->visit_type = $visitType[$labRequest->orderStage];
$visit->visit_number = $labRequest->patientVisitNumber;
// We'll save Visit in a transaction a little bit below
} else {
$visit = $visit->first();
if (strcmp($visitType[$labRequest->orderStage], $visit->visit_type) != 0) {
$visit = new Visit();
$visit->patient_id = $patient->id;
$visit->visit_type = $visitType[$labRequest->orderStage];
$visit->visit_number = $labRequest->patientVisitNumber;
}
}
$test = null;
//Check if parentLabNO is 0 thus its the main test and not a measure
if ($labRequest->parentLabNo == '0') {
//Check via the labno, if this is a duplicate request and we already saved the test
$test = Test::where('external_id', '=', $labRequest->labNo)->get();
if (!$test->first()) {
//Specimen
$specimen = new Specimen();
$specimen->specimen_type_id = TestType::find($testTypeId)->specimenTypes->lists('id')[0];
// We'll save the Specimen in a transaction a little bit below
$test = new Test();
$test->test_type_id = $testTypeId;
$test->test_status_id = Test::NOT_RECEIVED;
$test->created_by = User::EXTERNAL_SYSTEM_USER;
//Created by external system 0
$test->requested_by = $labRequest->requestingClinician;
$test->external_id = $labRequest->labNo;
DB::transaction(function () use($visit, $specimen, $test) {
$visit->save();
$specimen->save();
$test->visit_id = $visit->id;
$test->specimen_id = $specimen->id;
$test->save();
});
$this->saveToExternalDump($labRequest, $test->id);
return;
}
}
$this->saveToExternalDump($labRequest, null);
}