/** testGetSetValue */
public function testGetSetValue()
{
Zend_Registry::set('modulesEnable', $this->enabledModules);
Zend_Registry::set('notifier', new MIDAS_Notifier(false, null));
/** @var Validation_ScalarResultModel $scalarResultModel */
$scalarResultModel = MidasLoader::loadModel('ScalarResult', 'validation');
$daos = $scalarResultModel->getAll();
$sr = $daos[0];
$folder = new FolderDao();
$folder->setName('result');
$folder->setDescription('result');
$folder->setParentId(-1);
$this->Folder->save($folder);
$trainingItem = new ItemDao();
$trainingItem->setName('img00.mha');
$trainingItem->setDescription('training img 00');
$trainingItem->setType(0);
$this->Item->save($trainingItem);
$scalarResultModel->setFolder($sr, $folder);
$scalarResultModel->setItem($sr, $trainingItem);
$sr->setValue(90.009);
$scalarResultModel->save($sr);
$daos = $scalarResultModel->getAll();
$sr = $daos[0];
$this->assertEquals(90.009, $sr->getValue());
}
/** Import a directory recursively */
private function _recursiveParseDirectory($path, $currentdir)
{
$it = new DirectoryIterator($path);
foreach ($it as $fileInfo) {
if ($fileInfo->isDot()) {
continue;
}
// If the file/dir is not readable (permission issue)
if (!$fileInfo->isReadable()) {
$this->getLogger()->crit($fileInfo->getPathName() . ' cannot be imported. Not readable.');
continue;
}
// If this is too slow we'll figure something out
if ($this->_checkStopImport()) {
return false;
}
if ($fileInfo->isDir()) {
// we have a directory
// If the the directory actually doesn't exist at this point,
// skip it.
if (!file_exists($fileInfo->getPathName())) {
continue;
}
// Get the files in the directory and skip the folder if it does not
// contain any files and we aren't set to import empty directories. The
// count($files) <= 2 is there to account for our our friends . and ..
$files = scandir($fileInfo->getPathName());
if (!$this->importemptydirectories && $files && count($files) <= 2) {
continue;
}
// Find if the child exists
$child = $this->Folder->getFolderByName($currentdir, $fileInfo->getFilename());
// If the folder does not exist, create one.
if (!$child) {
$child = new FolderDao();
$child->setName($fileInfo->getFilename());
$child->setParentId($currentdir->getFolderId());
$child->setDateCreation(date('Y-m-d H:i:s'));
$child->setDescription('');
$this->Folder->save($child);
$this->Folderpolicyuser->createPolicy($this->userSession->Dao, $child, MIDAS_POLICY_ADMIN);
}
// Keep descending
$this->_recursiveParseDirectory($fileInfo->getPathName(), $child);
} else {
// We have a file
$this->_incrementFileProcessed();
$newrevision = true;
$item = $this->Folder->getItemByName($currentdir, $fileInfo->getFilename());
if (!$item) {
// Create an item
$item = new ItemDao();
$item->setName($fileInfo->getFilename());
$item->setDescription('');
$item->setPrivacyStatus(MIDAS_PRIVACY_PRIVATE);
// Must set this flag private initially
$this->Item->save($item, true);
// Set the policy of the item
$this->Itempolicyuser->createPolicy($this->userSession->Dao, $item, MIDAS_POLICY_ADMIN);
// Add the item to the current directory
$this->Folder->addItem($currentdir, $item);
}
// Check if the bistream has been updated based on the local date
$revision = $this->ItemRevision->getLatestRevision($item);
if ($revision) {
$newrevision = false;
$bitstream = $this->ItemRevision->getBitstreamByName($revision, $fileInfo->getFilename());
$curMD5 = UtilityComponent::md5file($fileInfo->getPathName());
$diskFileIsNewer = strtotime($bitstream->getDate()) < filemtime($fileInfo->getPathName());
$md5IsDifferent = $bitstream->getChecksum() != $curMD5;
if (!$bitstream || $diskFileIsNewer && $md5IsDifferent) {
$newrevision = true;
}
}
if ($newrevision) {
// Create a revision for the item
$itemRevisionDao = new ItemRevisionDao();
$itemRevisionDao->setChanges('Initial revision');
$itemRevisionDao->setUser_id($this->userSession->Dao->getUserId());
$this->Item->addRevision($item, $itemRevisionDao);
// Add bitstreams to the revision
$this->getLogger()->debug('create New Bitstream');
$bitstreamDao = new BitstreamDao();
$bitstreamDao->setName($fileInfo->getFilename());
$bitstreamDao->setPath($fileInfo->getPathName());
$bitstreamDao->fillPropertiesFromPath();
// Set the Assetstore
$bitstreamDao->setAssetstoreId($this->assetstoreid);
// Upload the bitstream
$assetstoreDao = $this->Assetstore->load($this->assetstoreid);
$this->Component->Upload->uploadBitstream($bitstreamDao, $assetstoreDao, true);
$this->ItemRevision->addBitstream($itemRevisionDao, $bitstreamDao);
}
}
}
unset($it);
return true;
}
/**
* test addResult function.
*/
public function testSetScore()
{
// Create training, testing, and truth folders
$testingFolder = new FolderDao();
$testingFolder->setName('testing');
$testingFolder->setDescription('testing');
$testingFolder->setParentId(-1);
$this->Folder->save($testingFolder);
$trainingFolder = new FolderDao();
$trainingFolder->setName('training');
$trainingFolder->setDescription('training');
$trainingFolder->setParentId(-1);
$this->Folder->save($trainingFolder);
$truthFolder = new FolderDao();
$truthFolder->setName('truth');
$truthFolder->setDescription('truth');
$truthFolder->setParentId(-1);
$this->Folder->save($truthFolder);
// Create result folder
$resultFolder = new FolderDao();
$resultFolder->setName('result');
$resultFolder->setDescription('result');
$resultFolder->setParentId(-1);
$this->Folder->save($resultFolder);
// Add items to the folders
$trainingItem = null;
$testingItem = null;
$truthItem = null;
$resultItem = null;
for ($i = 0; $i < 3; ++$i) {
$trainingItem = new ItemDao();
$testingItem = new ItemDao();
$truthItem = new ItemDao();
$resultItem = new ItemDao();
$trainingItem->setName('img0' . $i . '.mha');
$testingItem->setName('img0' . $i . '.mha');
$truthItem->setName('img0' . $i . '.mha');
$resultItem->setName('img0' . $i . '.mha');
$trainingItem->setDescription('training img ' . $i);
$testingItem->setDescription('testing img ' . $i);
$truthItem->setDescription('truth img ' . $i);
$resultItem->setDescription('result img ' . $i);
$trainingItem->setType(0);
$testingItem->setType(0);
$truthItem->setType(0);
$resultItem->setType(0);
$this->Item->save($trainingItem);
$this->Item->save($testingItem);
$this->Item->save($truthItem);
$this->Item->save($resultItem);
$this->Folder->addItem($trainingFolder, $trainingItem);
$this->Folder->addItem($testingFolder, $testingItem);
$this->Folder->addItem($truthFolder, $truthItem);
$this->Folder->addItem($resultFolder, $resultItem);
}
// Acquire the dashboard from the database
/** @var Validation_DashboardModel $dashboardModel */
$dashboardModel = MidasLoader::loadModel('Dashboard', 'validation');
$daos = $dashboardModel->getAll();
$dao = $daos[0];
// Add testing, training, and truth to the dashboard
$dashboardModel->setTraining($dao, $trainingFolder);
$dashboardModel->setTesting($dao, $testingFolder);
$dashboardModel->setTruth($dao, $truthFolder);
// Reload the dashboard and check it for consistency
$daos = $dashboardModel->getAll();
$dao = $daos[0];
$dashboardModel->addResult($dao, $resultFolder);
// Get the results
$results = $dao->getResults();
$firstResult = $results[2];
$items = $firstResult->getItems();
$values = array();
$count = 0;
foreach ($items as $item) {
$values[$item->getKey()] = $count * 15;
$dashboardModel->setScore($dao, $firstResult, $item, $count * 15);
++$count;
}
$daos = $dashboardModel->getAll();
$dao = $daos[0];
$this->assertEquals(3, count($dao->getScores()));
$scores = $dashboardModel->getScores($dao, $resultFolder);
$this->assertEquals($values, $scores);
}