<?php
$page_dir = str_replace('\\', '/', dirname(__FILE__)) . '/';
$serv_dir = $page_dir . "../../service/";
require_once $serv_dir . 'cegRecordServ.php';
require_once $serv_dir . 'keggServ.php';
require_once $serv_dir . 'util.php';
$flag = 0;
if (isset($_GET['access_num'])) {
$flag = 1;
$accessNum = trim($_GET['access_num']);
$cegBase = getCegBaseByAccessNum($accessNum);
$gidArr = getGidByAccessNum($accessNum);
$itemArr = array();
foreach ($gidArr as $gid) {
$annotation = getAnnotationByGid($gid);
$item['gid'] = $gid;
$item['gene_name'] = $annotation['Gene_Name'];
$item['description'] = $annotation['fundescrp'];
$item['sequence'] = getPlainNaSeq($gid);
$item['rfc_arr'] = getCompatibleRFC($item['sequence']);
$item['biobrick_arr'] = getBiobrickByGid($gid);
array_push($itemArr, $item);
}
}
if (!$flag) {
die;
}
?>
<!DOCTYPE html>
/**
* get biobricks belong to category of protein coding sequence in Registry of standard biological parts.
* @param type $gid
* @return array
*/
function getBiobrickByGid($gid)
{
$result = array();
$cdsArr = queryAllCdsBiobrick();
$annotation = getAnnotationByGid($gid);
foreach ($cdsArr as $cds) {
if (strtoupper($cds['protein']) == strtoupper($annotation['Gene_Name'])) {
$match = array('gid' => $gid, 'biobrick_name' => $cds['name'], 'protein' => $cds['protein']);
array_push($result, $match);
}
}
return $result;
}
