/**
* Remove schedule
*
* @param \Proethos2\ModelBundle\Entity\SubmissionTask $schedule
*/
public function removeSchedule(\Proethos2\ModelBundle\Entity\SubmissionTask $schedule)
{
$this->schedule->removeElement($schedule);
}
/**
* @Route("/submission/new/{submission_id}/fourth", name="submission_new_fourth_step")
* @Template()
*/
public function FourthStepAction($submission_id)
{
$output = array();
$request = $this->getRequest();
$session = $request->getSession();
$translator = $this->get('translator');
$em = $this->getDoctrine()->getManager();
$submission_repository = $em->getRepository('Proethos2ModelBundle:Submission');
$submission_cost_repository = $em->getRepository('Proethos2ModelBundle:SubmissionCost');
$submission_task_repository = $em->getRepository('Proethos2ModelBundle:SubmissionTask');
$user_repository = $em->getRepository('Proethos2ModelBundle:User');
$submission_clinical_trial_repository = $em->getRepository('Proethos2ModelBundle:SubmissionClinicalTrial');
$clinical_trial_name_repository = $em->getRepository('Proethos2ModelBundle:ClinicalTrialName');
// getting the current submission
$submission = $submission_repository->find($submission_id);
$output['submission'] = $submission;
$clinical_trial_names = $clinical_trial_name_repository->findByStatus(true);
$output['clinical_trial_names'] = $clinical_trial_names;
if (!$submission or $submission->getIsSended()) {
throw $this->createNotFoundException($translator->trans('No submission found'));
}
$allow_to_edit_submission = true;
$user = $this->get('security.token_storage')->getToken()->getUser();
// if current user is not owner, check the team
if ($user != $submission->getOwner()) {
$allow_to_edit_submission = false;
foreach ($submission->getTeam() as $team_member) {
// if current user = some team member, than it allows to edit
if ($user == $team_member) {
$allow_to_edit_submission = true;
}
}
}
if (!$allow_to_edit_submission) {
throw $this->createNotFoundException($translator->trans('No submission found'));
}
// checking if was a post request
if ($this->getRequest()->isMethod('POST')) {
// getting post data
$post_data = $request->request->all();
// checking required files
$required_fields = array('funding-source', 'primary-sponsor');
foreach ($required_fields as $field) {
if (!isset($post_data[$field]) or empty($post_data[$field])) {
$session->getFlashBag()->add('error', $translator->trans("Field '%field%' is required.", array("%field%" => $field)));
return $output;
}
}
// removing all clinical_trial to rewrite
foreach ($submission->getClinicalTrial() as $trial) {
$submission->removeClinicalTrial($trial);
$em->remove($trial);
$em->flush();
}
if (isset($post_data['clinical-trial'])) {
$submission->setClinicalTrialSecondary($post_data['clinical-trial-second']);
foreach ($post_data['clinical-trial'] as $key => $trial_data) {
$trial_name = $clinical_trial_name_repository->find($trial_data['name-id']);
$date = NULL;
if (!empty($trial_data['date'])) {
$date = new \DateTime($trial_data['date']);
}
// check if exists
$trial = $submission_clinical_trial_repository->findOneBy(array('submission' => $submission, 'name' => $trial_name, 'date' => $date, 'number' => $trial_data['number']));
if (!$trial) {
$trial = new SubmissionClinicalTrial();
$trial->setSubmission($submission);
$trial->setName($trial_name);
$trial->setNumber($trial_data['number']);
$trial->setDate($date);
}
$em->persist($trial);
$em->flush();
// add in submission
$submission->addClinicalTrial($trial);
}
}
// removing all team to readd
foreach ($submission->getBudget() as $budget) {
$submission->removeBudget($budget);
$em->remove($budget);
$em->flush();
}
if (isset($post_data['budget'])) {
foreach ($post_data['budget'] as $key => $cost) {
// check if exists
$submission_cost = $submission_cost_repository->findOneBy(array('submission' => $submission, 'description' => $cost['description'], 'quantity' => $cost['quantity'], 'unit_cost' => $cost['unit_cost']));
// if not exists, create the new submission_cost
if (!$submission_cost) {
$submission_cost = new SubmissionCost();
$submission_cost->setSubmission($submission);
$submission_cost->setDescription($cost['description']);
$submission_cost->setQuantity($cost['quantity']);
$submission_cost->setUnitCost($cost['unit_cost']);
}
$em->persist($submission_cost);
$em->flush();
// add in submission
$submission->addBudget($submission_cost);
}
}
$submission->setFundingSource($post_data['funding-source']);
$submission->setPrimarySponsor($post_data['primary-sponsor']);
$submission->setSecondarySponsor($post_data['secondary-sponsor']);
// removing all schedule to readd
foreach ($submission->getSchedule() as $schedule) {
$submission->removeSchedule($schedule);
$em->remove($schedule);
$em->flush();
}
if (isset($post_data['schedule'])) {
foreach ($post_data['schedule'] as $key => $task) {
// check if exists
$submission_task = $submission_task_repository->findOneBy(array('submission' => $submission, 'description' => $task['description'], 'init' => new \DateTime($task['init']), 'end' => new \DateTime($task['end'])));
// if not exists, create the new submission_task
if (!$submission_task) {
$submission_task = new SubmissionTask();
$submission_task->setSubmission($submission);
$submission_task->setDescription($task['description']);
$submission_task->setInit(new \DateTime($task['init']));
$submission_task->setEnd(new \DateTime($task['end']));
}
$em->persist($submission_task);
$em->flush();
// add in submission
$submission->addSchedule($submission_task);
}
}
$em->persist($submission);
$em->flush();
$session->getFlashBag()->add('success', $translator->trans("Fourth step saved with sucess."));
return $this->redirectToRoute('submission_new_fifth_step', array('submission_id' => $submission->getId()), 301);
}
return $output;
}