Exemplo n.º 1
0
 /**
  * Test the setLocusChromosomeFkLocus() method from the LocusChromosome class
  *
  * @uses \bcGen\MainBundle\Entity\LocusChromosome::setLocusChromosomeFkLocus()
  */
 public function testSetLocusChromosomeFkLocus()
 {
     echo "\n********************Test SetLocusChromosomeFkLocus()***************************************\n";
     $this->locusChromosome->setLocusChromosomeFkLocus($this->locus);
     $this->assertEquals($this->locus, $this->locusChromosome->getLocusChromosomeFkLocus());
 }
Exemplo n.º 2
0
 /**
  * 
  * {@inheritDoc}
  * 
  * @see \Doctrine\Common\DataFixtures\FixtureInterface::load()
  * 
  * @param Doctrine\Common\Persistence\ObjectManager $manager
  * 
  */
 public function load(ObjectManager $manager)
 {
     $locusChromosome1 = new LocusChromosome();
     $locusChromosome1->setPositionLocusBp(1);
     $locusChromosome1->setDirectStrand(1);
     $locusChromosome1->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU1'));
     $locusChromosome1->setLocusChromosomeFkLocus($this->getReference('LocusTU1'));
     $manager->persist($locusChromosome1);
     $locusChromosome2 = new LocusChromosome();
     $locusChromosome2->setPositionLocusBp(2);
     $locusChromosome2->setDirectStrand(1);
     $locusChromosome2->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU1'));
     $locusChromosome2->setLocusChromosomeFkLocus($this->getReference('LocusTU2'));
     $manager->persist($locusChromosome2);
     $locusChromosome3 = new LocusChromosome();
     $locusChromosome3->setPositionLocusBp(3);
     $locusChromosome3->setDirectStrand(0);
     $locusChromosome3->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU1'));
     $locusChromosome3->setLocusChromosomeFkLocus($this->getReference('LocusTU3'));
     $manager->persist($locusChromosome3);
     $locusChromosome4 = new LocusChromosome();
     $locusChromosome4->setPositionLocusBp(4);
     $locusChromosome4->setDirectStrand(0);
     $locusChromosome4->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU1'));
     $locusChromosome4->setLocusChromosomeFkLocus($this->getReference('LocusTU4'));
     $manager->persist($locusChromosome4);
     $locusChromosome5 = new LocusChromosome();
     $locusChromosome5->setPositionLocusBp(5);
     $locusChromosome5->setDirectStrand(0);
     $locusChromosome5->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU1'));
     $locusChromosome5->setLocusChromosomeFkLocus($this->getReference('LocusTU5'));
     $manager->persist($locusChromosome5);
     $locusChromosome6 = new LocusChromosome();
     $locusChromosome6->setPositionLocusBp(6);
     $locusChromosome6->setDirectStrand(1);
     $locusChromosome6->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU2'));
     $locusChromosome6->setLocusChromosomeFkLocus($this->getReference('LocusTU6'));
     $manager->persist($locusChromosome6);
     $locusChromosome7 = new LocusChromosome();
     $locusChromosome7->setPositionLocusBp(7);
     $locusChromosome7->setDirectStrand(1);
     $locusChromosome7->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU2'));
     $locusChromosome7->setLocusChromosomeFkLocus($this->getReference('LocusTU7'));
     $manager->persist($locusChromosome7);
     $locusChromosome8 = new LocusChromosome();
     $locusChromosome8->setPositionLocusBp(8);
     $locusChromosome8->setDirectStrand(0);
     $locusChromosome8->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU2'));
     $locusChromosome8->setLocusChromosomeFkLocus($this->getReference('LocusTU8'));
     $manager->persist($locusChromosome8);
     $locusChromosome9 = new LocusChromosome();
     $locusChromosome9->setPositionLocusBp(9);
     $locusChromosome9->setDirectStrand(0);
     $locusChromosome9->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU2'));
     $locusChromosome9->setLocusChromosomeFkLocus($this->getReference('LocusTU9'));
     $manager->persist($locusChromosome9);
     $locusChromosome10 = new LocusChromosome();
     $locusChromosome10->setPositionLocusBp(10);
     $locusChromosome10->setDirectStrand(0);
     $locusChromosome10->setLocusChromosomeFkChromosome($this->getReference('ChromosomeTU2'));
     $locusChromosome10->setLocusChromosomeFkLocus($this->getReference('LocusTU10'));
     $manager->persist($locusChromosome10);
     $manager->flush();
 }