function ns_capture_sample(ns_experiment &$experiment, ns_device &$device, $id = -1, &$sql = "")
{
$this->experiment_id_p = $experiment->id();
$this->id_p = $id;
$this->mask_id = 0;
$this->device = $device;
$this->turn_off_lamp_after_capture = FALSE;
$this->censored = FALSE;
if ($this->id_p != -1) {
$this->load($this->id_p, $sql);
}
}
$sql->get_row($query, $regions);
for ($i = 0; $i < sizeof($regions); $i++) {
$query = "DELETE FROM processing_jobs WHERE region_id=" . $regions[$i][0];
//echo $query . "<BR>";
$sql->send_query($query);
}
header("Location:manage_samples.php?experiment_id={$experiment_id}\n\n");
die("");
}
if ($delete_experiment_jobs) {
$query = "DELETE FROM processing_jobs WHERE experiment_id = {$experiment_id} AND sample_id=0 AND region_id = 0";
$sql->send_query($query);
header("Location: manage_samples.php?experiment_id={$experiment_id}\n\n");
die("");
}
$experiment = new ns_experiment($experiment_id, '', $sql, false);
#if ($hide_censored)die("HIDE");
# else die("NO HIDE");
$experiment->get_sample_information($sql, !$hide_censored);
/**************************
Sort Samples, putting censored samples at back of list.
*************************/
$uncensored = array();
$censored = array();
for ($i = 0; $i < sizeof($experiment->samples); $i++) {
if ($experiment->samples[$i]->censored) {
array_push($censored, $experiment->samples[$i]);
} else {
array_push($uncensored, $experiment->samples[$i]);
}
}
$show_images = TRUE;
} else {
$show_images = FALSE;
}
if ($start_position == '') {
$start_position = 0;
}
$count = @$query_string['count'];
if ($count == '') {
$count = 4;
}
try {
if ($experiment_id == '' || $experiment_id == 0) {
throw new ns_exception("Please specify an experiment number");
}
$experiment = new ns_experiment($experiment_id, '', $sql, false);
if ($_POST["save"] != '') {
$sample_data = array();
$region_data = array();
foreach ($_POST as $key => $value) {
$is_sample = $key[0] == 's';
$is_region = $key[0] == 'r';
if (!$is_sample && !$is_region) {
continue;
}
$is_description = $key[1] == 'd';
$is_strain = $key[1] == 's';
$is_censored = $key[1] == 'c';
$is_censored_reason = $key[1] == 'r';
$is_strain_condition_1 = $key[1] == '1';
$is_strain_condition_2 = $key[1] == '2';
