protected function __construct($db, $awsAccessKey, $awsSecretAccessKey, $kissmetricsBucket)
{
parent::__construct();
$this->db = $db;
$this->db->connect();
$this->kissmetricsBucket = $kissmetricsBucket;
$this->s3 = new S3($awsAccessKey, $awsSecretAccessKey);
}
protected function __construct()
{
parent::__construct();
global $awsAccessKey;
global $awsSecretAccessKey;
global $kissmetricsBucket;
global $db;
$this->kissmetrics = \library\vendor\Kissmetrics::getInstance($db, $awsAccessKey, $awsSecretAccessKey, $kissmetricsBucket);
}
function __construct()
{
parent::__construct();
}
function sendFeedbackComment($sqlDataArray = array())
{
$this->dataArray = array('comment_name' => FormElements::getPostString('sendFeedbackName', true), 'comment_email' => FormElements::getPostString('sendFeedbackEmail', true), 'comment_content' => FormElements::getPostString('sendFeedbackContent', true), 'comment_date' => date('Y-m-d'));
if (!in_array('errorRequiredField', $this->dataArray)) {
$addComment = $this->db->insert('comment', $this->dataArray);
if ($addComment > 0) {
$this->dataArray = array('pirna_code' => $sqlDataArray['pirna_code'], 'comment_id' => $addComment);
$addRel = $this->db->insert('rel_comment_pirna', $this->dataArray);
echo 'success/Your comment will be checked soon.';
parent::generateLog('sent a comment to pirna: ' . $sqlDataArray['pirna_code'], 'attempts', '220');
} else {
echo 'error/Please Check the Information Sent.';
parent::generateLog('error sending a comment to pirna: ' . $sqlDataArray['pirna_code'], 'attempts', '221');
}
} else {
echo 'error/Please Check the Information Sent.';
parent::generateLog('error sending a comment to pirna: ' . $sqlDataArray['pirna_code'], 'attempts', '221');
}
}
function searchCluster($sqlDataArray = array())
{
if (isset($_POST['search'])) {
$this->dataArray = array('cluster_chromosome' => FormElements::getPostInteger('inputSearchChromosome', true), 'cluster_start' => FormElements::getPostInteger('inputSearchStart', true), 'cluster_end' => FormElements::getPostInteger('inputSearchEnd', true));
$this->formToken = FormElements::getPostString('token', true);
parent::checkFormRequired($this->dataArray);
parent::checkFormToken($this->formToken, 'search/cluster');
} elseif (isset($_GET['cluster_chromosome']) && isset($_GET['cluster_start']) && isset($_GET['cluster_end'])) {
$this->dataArray = array('cluster_chromosome' => FormElements::filterInteger($_GET['cluster_chromosome'], true), 'cluster_start' => FormElements::filterInteger($_GET['cluster_start'], true), 'cluster_end' => FormElements::filterInteger($_GET['cluster_end'], true));
}
if (!in_array('errorRequiredField', $this->dataArray) && (isset($_GET['cluster_chromosome']) || $this->formToken === Session::getSession('formToken')) && !FlashMessages::hasFlashMessage()) {
$cookieData = date('Y-m-d') . '|cluster|' . 'cluster_chromosome|' . $this->dataArray['cluster_chromosome'] . '|cluster_start|' . $this->dataArray['cluster_start'] . '|cluster_end|' . $this->dataArray['cluster_end'];
if (isset($_COOKIE['pirna_db_cache_search'])) {
$newData = $_COOKIE['pirna_db_cache_search'] . '@' . $cookieData;
} else {
$newData = $cookieData;
}
setcookie('pirna_db_cache_search', $newData, time() + 86400 * 30 * 30, '/');
Session::unsetSession('formToken');
$this->sqlAllResults = 'SELECT cluster_code,
cluster_chromosome,
cluster_start,
cluster_end
FROM cluster
WHERE cluster_chromosome = ' . $this->dataArray['cluster_chromosome'] . ' AND
cluster_start >= ' . $this->dataArray['cluster_start'] . ' AND
cluster_end <= ' . $this->dataArray['cluster_end'];
$this->allResults = $this->db->select($this->sqlAllResults);
$this->results[0] = count($this->allResults);
$this->results[1] = ceil($this->results[0] / $sqlDataArray['maximumQuantity']);
$this->sql = 'SELECT cluster_code,
cluster_chromosome,
cluster_start,
cluster_end
FROM cluster
WHERE cluster_chromosome = ' . $this->dataArray['cluster_chromosome'] . ' AND
cluster_start >= ' . $this->dataArray['cluster_start'] . ' AND
cluster_end <= ' . $this->dataArray['cluster_end'] . '
LIMIT :initialItem, :maximumQuantity';
$this->results[2] = $this->db->select($this->sql, $sqlDataArray);
$this->results[3] = '?cluster_chromosome=' . $this->dataArray['cluster_chromosome'] . '&' . 'cluster_start=' . $this->dataArray['cluster_start'] . '&' . 'cluster_end=' . $this->dataArray['cluster_end'];
if ($this->results[0] > 0) {
return $this->results;
} else {
FlashMessages::setFlashMessage('noresult', '<b>Not Found!</b><br />None cluster was found using your query..');
}
}
}
function sendCreateInfo($type = null)
{
if ($type === 'faq') {
$this->table = 'faq';
$this->dataArray = array('faq_title' => FormElements::getPostString('createFaqTitle', true), 'faq_content' => FormElements::getPostString('createFaqContent', true), 'faq_type' => FormElements::getPostString('createFaqType', true));
} elseif ($type === 'article') {
$this->table = 'system_article';
$this->dataArray = array('article_title' => FormElements::getPostString('createArticleTitle', true), 'article_author' => FormElements::getPostString('createArticleAuthor', true), 'article_journal' => FormElements::getPostString('createArticleJournal', true), 'article_date' => FormElements::getPostString('createArticleDate', true), 'article_reference' => FormElements::getPostString('createArticleReference', true));
} elseif ($type === 'informations') {
$this->table = 'general_text';
$this->dataArray = array('text_content' => FormElements::getPostString('createInformationsContent', true), 'text_type' => FormElements::getPostString('createInformationsType', true));
} elseif ($type === 'update') {
$this->table = 'info_update';
$this->dataArray = array('info_update_title' => FormElements::getPostString('createUpdateTitle', true), 'info_update_content' => FormElements::getPostString('createUpdateContent', true));
} else {
FlashMessages::setFlashMessage('error', '<b>Error!</b><br />This Section Does not Exists.');
}
$this->formToken = FormElements::getPostString('token', true);
parent::checkFormRequired($this->dataArray);
parent::checkFormToken($this->formToken, 'administration/createinfo/' . $type);
if (!FlashMessages::hasFlashMessage()) {
Session::unsetSession('formToken');
$this->resultsDelete = $this->db->insert($this->table, $this->dataArray);
if (count($this->resultsDelete) === 1) {
FlashMessages::setFlashMessage('success', '<b>Success!</b><br />Succesfully Created.');
} else {
FlashMessages::setFlashMessage('error', '<b>Error!</b><br />Unsuccesfully Created.');
}
}
}