public static function get_submission($values, $args)
{
$values['habitat-count'] = 2;
$habitatSamples = array();
for ($i = 1; $i <= $values['habitat-count']; $i++) {
$habitatSamples["habitat{$i}"] = array();
}
foreach ($values as $key => $value) {
if (substr_count($key, ':') === 3) {
$parts = explode(':', $key, 4);
if ($parts[0] === 'smpAttr') {
// If the last part of a habitat field is not a number, this is just a dummy field used
// when cloning habitat controls. We also skip empty new attribute values.
if (preg_match('/^\\d+$/', $parts[3]) && (!empty($parts[2]) || !empty($value))) {
// habitat number is the last part of the attribute field name
$id = array_pop($parts);
// remove empty stuff from the attribute name (e.g. an unused space for the existing value ID, if a new attribute value).
while (empty($parts[count($parts) - 1])) {
array_pop($parts);
}
$fieldname = implode(':', $parts);
$habitatSamples["habitat{$id}"][$fieldname] = $value;
}
unset($values[$key]);
}
}
$parts = explode(':', $key);
// For the group_name, the autocomplete functionality needs to be removed from the submission.
// So copy the edit box into the underlying field which gets posted.
if (array_pop($parts) === 'group_name') {
$values[implode(':', $parts)] = $value;
}
}
$buddyPairSubmission = submission_builder::wrap_with_images($values, 'sample');
unset($buddyPairSubmission['fields']['habitat-count']);
// Get the list of records implied by the SACFOR data for each habitat. At this point we'll create 1 big list and split
// it across the habitats later.
$occurrences = data_entry_helper::wrap_species_checklist($values, true, array(), array());
// now work out which habitat contains which occurrence
$habitatOccurrences = array();
foreach (array_keys($habitatSamples) as $habitatId) {
$habitatOccurrences[$habitatId] = array();
}
foreach ($occurrences as $occurrence) {
// take a copy of the fields with all habitat data
$fields = array_merge($occurrence['model']['fields']);
// @todo Remove hard coded field ID.
$habitatFields = preg_grep('/occAttr:243(:\\d+)?/', array_keys($fields));
if (count($habitatFields)) {
$habitatId = $fields[array_pop($habitatFields)]['value'];
} else {
// this case occurs when deleting an occurrence, as the habitat ID input field is disabled. Therefore
// we need to revert to the original hidden sampleIdx field for the loaded record.
$habitatId = $fields['sampleIDX']['value'] + 1;
}
// zero indexed
$habitatOccurrences["habitat{$habitatId}"][] = $occurrence;
}
// now create the submodel data for each habitat.
$buddyPairSubmission['subModels'] = array();
// copy the basic sample data into each set of habitat subsample values
foreach ($habitatSamples as $habitatId => &$habitatSample) {
$habitatIdx = str_replace('habitat', '', $habitatId);
$habitatSample['website_id'] = $values['website_id'];
$habitatSample['survey_id'] = $values['survey_id'];
if (isset($_POST["habitat_sample_id:{$habitatIdx}"])) {
$habitatSample['sample:id'] = $_POST["habitat_sample_id:{$habitatIdx}"];
}
$habitatSample['sample:date'] = $values['sample:date'];
$habitatSample['sample:entered_sref'] = $values['sample:entered_sref'];
$habitatSample['sample:entered_sref_system'] = $values['sample:entered_sref_system'];
$habitatSample['sample:input_form'] = $values['sample:input_form'];
if (isset($_POST["sample:comment:{$habitatIdx}"])) {
$habitatSample['sample:comment'] = $_POST["sample:comment:{$habitatIdx}"];
unset($buddyPairSubmission['fields']["comment:{$habitatIdx}"]);
}
$habitatSubmission = submission_builder::wrap($habitatSample, 'sample');
$habitatSubmission['subModels'] = $habitatOccurrences[$habitatId];
$buddyPairSubmission['subModels'][] = array('fkId' => 'parent_id', 'model' => $habitatSubmission);
}
return $buddyPairSubmission;
}
/**
* Helper function to simplify building of a submission that contains a single supersample,
* with multiple subsamples, each of which has multiple occurrences records, as generated
* by a species_checklist control.
*
* @param array $values List of the posted values to create the submission from.
* @param boolean $include_if_any_data If true, then any list entry which has any data
* set will be included in the submission. Set this to true when hiding the select checkbox
* in the grid.
* @param array $zero_attrs Set to an array of abundance attribute field IDs that can be
* treated as abundances. Alternatively set to true to treat all occurrence custom attributes
* as possible zero abundance indicators.
* @param array $zero_values Set to an array of values which are considered to indicate a
* zero abundance record if found for one of the zero_attrs. Values are case-insensitive. Defaults to
* array('0','None','Absent').
* of values that can be treated as meaning a zero abundance record. E.g.
* array('
* @return array Sample submission array
*/
public static function build_sample_subsamples_occurrences_submission($values, $include_if_any_data = false, $zero_attrs = true, $zero_values = array('0', 'None', 'Absent'))
{
// We're mainly submitting to the sample model
$sampleMod = submission_builder::wrap_with_images($values, 'sample');
$subModels = data_entry_helper::wrap_species_checklist_with_subsamples($values, $include_if_any_data, $zero_attrs, $zero_values);
// Add the subsamples/occurrences in as subModels without overwriting others such as a sample image
if (array_key_exists('subModels', $sampleMod)) {
$sampleMod['subModels'] = array_merge($sampleMod['subModels'], $subModels);
} else {
$sampleMod['subModels'] = $subModels;
}
return $sampleMod;
}
/**
* Handles the construction of a submission array from a set of form values.
* @param array $values Associative array of form data values.
* @param array $args iform parameters.
* @return array Submission structure.
*/
public static function get_submission($values, $args)
{
if (isset($values['source'])) {
// comes from main Sites tab, Admins may create so need to check for locations_website entry
$locModel = submission_builder::wrap_with_images($values, 'location');
if (isset($values['locations_website:website_id'])) {
// assume no other submodels
$locModel['subModels'] = array(array('fkId' => 'location_id', 'model' => array('id' => 'locations_website', 'fields' => array('website_id' => array('value' => $values['locations_website:website_id'])))));
}
return $locModel;
}
if (isset($values['sample:location_id']) && $values['sample:location_id'] == '') {
unset($values['sample:location_id']);
}
if (isset($values['sample:recorder_names'])) {
if (is_array($values['sample:recorder_names'])) {
$values['sample:recorder_names'] = implode("\r\n", $values['sample:recorder_names']);
}
}
// else just load the string
if (isset($values['location:name'])) {
$values['sample:location_name'] = $values['location:name'];
}
$sampleMod = submission_builder::wrap_with_images($values, 'sample');
if (!isset($values['sample:deleted'])) {
if (isset($values['gridmode'])) {
$subModels = self::wrap_species_checklist($values);
} else {
$subModels = submission_builder::wrap_with_images($values, 'occurrence');
}
foreach ($values as $key => $value) {
$parts = explode(':', $key, 5);
if ($parts[0] == 'targ' && $parts[3] == 'presence') {
$smp = array('fkId' => 'parent_id', 'model' => array('id' => 'sample', 'fields' => array()));
$smp['model']['fields']['survey_id'] = array('value' => $values['survey_id']);
$smp['model']['fields']['website_id'] = array('value' => $values['website_id']);
$smp['model']['fields']['date'] = array('value' => $values['sample:date']);
$smp['model']['fields']['smpAttr:' . $parts[4]] = array('value' => $parts[2]);
if (isset($values['sample:location_id'])) {
$smp['model']['fields']['location_id'] = array('value' => $values['sample:location_id']);
} else {
if (isset($values['location:parent_id'])) {
$smp['model']['fields']['location_id'] = array('value' => $values['location:parent_id']);
} else {
$smp['model']['fields']['geom'] = array('value' => $values['location:centroid_geom']);
$smp['model']['fields']['entered_sref'] = array('value' => $values['location:centroid_sref']);
$smp['model']['fields']['entered_sref_system'] = array('value' => $values['location:centroid_sref_system']);
}
}
if ($value != '1') {
$smp['model']['fields']['deleted'] = array('value' => 't');
}
if ($parts[1] != '-') {
$smp['model']['fields']['id'] = array('value' => $parts[1]);
}
foreach ($values as $key1 => $value1) {
$moreParts = explode(':', $key1, 5);
if ($moreParts[0] == 'targ' && $moreParts[1] == $parts[1] && $moreParts[2] == $parts[2] && $moreParts[3] == 'smpAttr') {
$smp['model']['fields']['smpAttr:' . $moreParts[4]] = array('value' => $value1);
}
}
if (isset($values['sample:location_id'])) {
$smp['model']['fields']['location_id'] = array('value' => $values['sample:location_id']);
} else {
$smp['model']['fields']['centroid_sref'] = array('value' => $values['sample:entered_sref']);
$smp['model']['fields']['centroid_sref_system'] = array('value' => $values['sample:entered_sref_system']);
$smp['model']['fields']['centroid_geom'] = array('value' => $values['sample:geom']);
}
if ($value == '1' || $parts[1] != '-') {
$subModels[] = $smp;
}
}
}
if (count($subModels) > 0) {
$sampleMod['subModels'] = $subModels;
}
if (isset($values['location:location_type_id'])) {
$locationMod = submission_builder::wrap_with_images($values, 'location');
$locationMod['subModels'] = array(array('fkId' => 'location_id', 'model' => $sampleMod));
if (array_key_exists('locations_website:website_id', $_POST)) {
$lw = submission_builder::wrap_with_images($values, 'locations_website');
$locationMod['subModels'][] = array('fkId' => 'location_id', 'model' => $lw);
}
return $locationMod;
}
} else {
if (isset($values['location:deleted'])) {
$locationMod = submission_builder::wrap_with_images($values, 'location');
$locationMod['subModels'] = array(array('fkId' => 'location_id', 'model' => $sampleMod));
return $locationMod;
}
}
return $sampleMod;
}
/**
* Handles the construction of a submission array from a set of form values.
* @param array $values Associative array of form data values.
* @param array $args iform parameters.
* @return array Submission structure.
*/
public static function get_submission($values, $args)
{
if (isset($values['sample:recorder_names'])) {
if (is_array($values['sample:recorder_names'])) {
$values['sample:recorder_names'] = implode("\r\n", $values['sample:recorder_names']);
}
}
// else just load the string
if (isset($values['gridmode'])) {
$occurrences = data_entry_helper::wrap_species_checklist($values);
} else {
$occurrences = submission_builder::wrap_with_images($values, 'occurrence');
}
// when a non admin selects an existing location they can not modify it or its attributes and the location record does not form part of the submission
if (isset($values['location:name'])) {
$sampleMod = submission_builder::wrap_with_images($values, 'sample');
if (count($occurrences) > 0) {
$sampleMod['subModels'] = $occurrences;
}
$locationMod = submission_builder::wrap_with_images($values, 'location');
$locationMod['subModels'] = array(array('fkId' => 'location_id', 'model' => $sampleMod));
if (array_key_exists('locations_website:website_id', $_POST)) {
$lw = submission_builder::wrap_with_images($values, 'locations_website');
$locationMod['subModels'][] = array('fkId' => 'location_id', 'model' => $lw);
}
return $locationMod;
}
$values['sample:location_id'] = $values['location:id'];
$sampleMod = submission_builder::wrap_with_images($values, 'sample');
if (count($occurrences) > 0) {
$sampleMod['subModels'] = $occurrences;
}
return $sampleMod;
}
/**
* Handles the construction of a submission array from a set of form values.
* @param array $values Associative array of form data values.
* @param array $args iform parameters.
* @return array Submission structure.
*/
public static function get_submission($values, $args)
{
if (isset($values['source'])) {
// comes from main Sites tab, Admins may create so need to check for locations_website entry
$locModel = submission_builder::wrap_with_images($values, 'location');
if (isset($values['locations_website:website_id'])) {
// assume no other submodels
$locModel['subModels'] = array(array('fkId' => 'location_id', 'model' => array('id' => 'locations_website', 'fields' => array('website_id' => array('value' => $values['locations_website:website_id'])))));
}
return $locModel;
}
if (isset($values['sample:recorder_names'])) {
if (is_array($values['sample:recorder_names'])) {
$values['sample:recorder_names'] = implode("\r\n", $values['sample:recorder_names']);
}
}
// else just load the string
$sampleMod = data_entry_helper::wrap_with_attrs($values, 'sample');
if (isset($values['sample:deleted'])) {
return $sampleMod;
}
$subsamples = array();
$locations = array();
foreach ($values as $key => $value) {
$parts = explode(':', $key, 4);
// $cloneprefix='CG:--rownum--:--sampleid--:smpAttr:--attr_id--[:--attr_value_id--]
// $cloneprefix='CG:--rownum--:--sampleid--:smpAttr:--attr_id--\[\] for a multivalue checkbox group, with an array value
if ($parts[0] == 'CG' && count($parts) > 1 && $parts[1] != '--rownum--' && $parts[1] != '') {
$field = explode(':', $parts[3]);
if ($field[0] == 'location') {
$locations[$parts[1]][$field[1]] = array('value' => $value);
$locations[$parts[1]]['website_id'] = array('value' => $values['website_id']);
$locations[$parts[1]]['survey_id'] = array('value' => $values['survey_id']);
} else {
if ($parts[2] != "--sampleid--" && $parts[2] != "") {
$subsamples[$parts[1]]['id'] = array('value' => $parts[2]);
}
if (is_array($value)) {
for ($i = count($value) - 1; $i >= 0; $i--) {
// reverse order so we can unset array members.
$tokens = explode(':', $value[$i], 5);
// need to discard the CG prefix
if (count($tokens) > 1) {
unset($value[$i]);
$subsamples[$parts[1]][$tokens[4]] = array('value' => $tokens[0]);
}
}
if (count($value) > 0) {
// sweep up any new ones.
$subsamples[$parts[1]][$parts[3]] = array('value' => $value);
}
} else {
$subsamples[$parts[1]][$parts[3]] = array('value' => $value);
}
$subsamples[$parts[1]]['website_id'] = array('value' => $values['website_id']);
$subsamples[$parts[1]]['survey_id'] = array('value' => $values['survey_id']);
}
}
}
// locations and subsamples arrays are indexed by cgrownum.
// next create an array of subsample models with their occurrences attached.
$subsamples2 = array();
$newsgrowContents = array();
// array indexed on sgrownum of subarrays of samples which have new occurrences
ksort($subsamples);
// by cgrownum
foreach ($subsamples as $sampleIndex => $subsampleFields) {
if (isset($subsampleFields['date']) && $subsampleFields['date']['value'] != "") {
$subsampleFields['location_name'] = $subsampleFields['name'];
$subsample = array('fkId' => 'parent_id', 'model' => array('id' => 'sample', 'fields' => $subsampleFields));
if (isset($locations[$sampleIndex])) {
$locweb = array('fkId' => 'location_id', 'model' => array('id' => 'locations_website', 'fields' => array('website_id' => array('value' => $values['website_id']))));
$locations[$sampleIndex]['name'] = $subsampleFields['name'];
$locations[$sampleIndex]['parent_id'] = array('value' => $values['sample:location_id']);
$locations[$sampleIndex]['centroid_sref_system'] = array('value' => $values['location:centroid_sref_system']);
$subsample['model']['superModels'] = array(array('fkId' => 'location_id', 'model' => array('id' => 'location', 'fields' => $locations[$sampleIndex], 'subModels' => array($locweb))));
}
$occs = array();
foreach ($values as $key => $value) {
$parts = explode(':', $key, 7);
// SG:--sgrownum--:--cgrownum--:--sampleid--:--ttlid--:--occid--:occAttr:--attr_id--[:--attr_value_id--]
if ($parts[0] == 'SG' && count($parts) > 1 && $parts[4] != '--ttlid--' && $parts[4] != '' && $parts[2] == $sampleIndex && ($parts[5] != "--occid--" && $parts[5] != "" || $value != "")) {
$occ = array('fkId' => 'sample_id', 'model' => array('id' => 'occurrence', 'fields' => array('taxa_taxon_list_id' => array('value' => $parts[4]), 'website_id' => array('value' => $values['website_id']), 'survey_id' => array('value' => $values['survey_id']), $parts[6] => array('value' => $value))));
if ($value == "") {
$occ['model']['fields']['deleted'] = array('value' => 't');
unset($occ['model']['fields'][$parts[6]]);
}
if ($parts[5] != "--occid--" && $parts[5] != "") {
$occ['model']['fields']['id'] = array('value' => $parts[5]);
} else {
if (!isset($newsgrowContents[intval($parts[1])])) {
$newsgrowContents[intval($parts[1])] = array();
}
$newsgrowContents[intval($parts[1])][] = $sampleIndex;
}
$occs[] = $occ;
}
}
if (count($occs) > 0) {
$subsample['model']['subModels'] = $occs;
}
$subsamples2[$sampleIndex] = $subsample;
} else {
if (isset($subsampleFields['id']) && $subsampleFields['id']['value'] != "") {
$subsample = array('fkId' => 'parent_id', 'model' => array('id' => 'sample', 'fields' => array('id' => $subsampleFields['id'], 'deleted' => array('value' => 't'), 'website_id' => $subsampleFields['website_id'], 'survey_id' => $subsampleFields['survey_id'])));
$subsamples2[$sampleIndex] = $subsample;
}
}
}
// finally create an unindexed array of subsamples, in the order of sgrownum....
// don't care about order of already saved occurrences, only new ones: in fact old ones may mess things up!
// The order in which we need to save the occurrences is how they are displayed in the form. This allows us to recreate the form later on.
$subsamples3 = array();
// don't want this indexed
$subsampleslist = array();
// but need a list of those included so far!
// new sgrowContents just has a list of cgrownums for that sgrow
ksort($newsgrowContents);
foreach ($newsgrowContents as $sgrownum => $list) {
// this is done in sgrownum order.
foreach ($list as $cgrow) {
if (!isset($subsampleslist[$cgrow])) {
$subsampleslist[$cgrow] = true;
$subsamples3[] = $subsamples2[$cgrow];
}
}
}
// now we dump in any other subsamples
foreach ($subsamples2 as $cgrownum => $subsample) {
if (!isset($subsampleslist[$cgrownum])) {
$subsampleslist[$cgrownum] = true;
$subsamples3[] = $subsample;
}
}
if (count($subsamples3) > 0) {
$sampleMod['subModels'] = $subsamples3;
}
return $sampleMod;
}
/**
* Handles the construction of a submission array from a set of form values.
* @param array $values Associative array of form data values.
* @param array $args iform parameters.
* @return array Submission structure.
*/
public static function get_submission($values, $args)
{
if (isset($values['source'])) {
// comes from main Sites tab, Admins may create so need to check for locations_website entry
$locModel = submission_builder::wrap_with_images($values, 'location');
if (isset($values['locations_website:website_id'])) {
// assume no other submodels
$locModel['subModels'] = array(array('fkId' => 'location_id', 'model' => array('id' => 'locations_website', 'fields' => array('website_id' => array('value' => $values['locations_website:website_id'])))));
}
return $locModel;
}
if (isset($values['sample:recorder_names'])) {
if (is_array($values['sample:recorder_names'])) {
$values['sample:recorder_names'] = implode("\r\n", $values['sample:recorder_names']);
}
}
// else just load the string
$sampleMod = submission_builder::wrap_with_images($values, 'sample');
if (!isset($values['sample:deleted'])) {
if (isset($values['gridmode'])) {
$occurrences = data_entry_helper::wrap_species_checklist($values);
} else {
$occurrences = submission_builder::wrap_with_images($values, 'occurrence');
}
// when a non admin selects an existing location they can not modify it or its attributes and the location record does not form part of the submission
if (isset($values['location:location_type_id'])) {
if (count($occurrences) > 0) {
$sampleMod['subModels'] = $occurrences;
}
$locationMod = submission_builder::wrap_with_images($values, 'location');
$locationMod['subModels'] = array(array('fkId' => 'location_id', 'model' => $sampleMod));
if (array_key_exists('locations_website:website_id', $_POST)) {
$lw = submission_builder::wrap_with_images($values, 'locations_website');
$locationMod['subModels'][] = array('fkId' => 'location_id', 'model' => $lw);
}
return $locationMod;
}
// $values['sample:location_id'] = $values['location:id'];
if (count($occurrences) > 0) {
$sampleMod['subModels'] = $occurrences;
}
}
return $sampleMod;
}
/**
* Builds the special submission format required for seasearch data
* @param array $values
* @param array $args
* @return array
* @throws \Exception
*/
public static function get_submission($values, $args)
{
// First, build an array of the field values for each habitat sample.
$habitatSamples = array();
foreach ($values as $key => $value) {
if (substr_count($key, ':') === 3) {
$parts = explode(':', $key, 4);
if ($parts[0] === 'smpAttr') {
// If the last part of a habitat field is not a number, this is just a dummy field used
// when cloning habitat controls.
if (preg_match('/^\\d+$/', $parts[3])) {
// habitat number is the last part of the attribute field name
$id = array_pop($parts);
if (!isset($habitatSamples["habitat{$id}"])) {
$habitatSamples["habitat{$id}"] = array();
}
// Skip empty new attribute values.
if (!empty($parts[2]) || !empty($value)) {
// remove empty stuff from the attribute name (e.g. an unused space for the existing value ID, if a new attribute value).
while (empty($parts[count($parts) - 1])) {
array_pop($parts);
}
$fieldname = implode(':', $parts);
$habitatSamples["habitat{$id}"][$fieldname] = $value;
}
}
unset($values[$key]);
}
}
// Also check for habitat photos, attached to a fake table name indicating the habitat index
if (preg_match('/^sample_medium(?P<id>\\d)/', $key, $matches)) {
$parts = explode(':', $key);
if (!isset($habitatSamples["habitat{$matches['id']}"])) {
$habitatSamples["habitat{$matches['id']}"] = array();
}
$parts[0] = 'sample_medium';
$habitatSamples["habitat{$matches['id']}"][implode(':', $parts)] = $value;
}
$parts = explode(':', $key);
// For the group_name, the autocomplete functionality needs to be removed from the submission.
// So copy the edit box into the underlying field which gets posted.
if (array_pop($parts) === 'group_name') {
$values[implode(':', $parts)] = $value;
}
}
// Find the attribute which contains SACFORP habitat data.
$readAuth = data_entry_helper::get_read_auth(variable_get('indicia_website_id'), variable_get('indicia_password'));
$attributeOpts = array('valuetable' => 'occurrence_attribute_value', 'attrtable' => 'occurrence_attribute', 'key' => 'occurrence_id', 'fieldprefix' => 'occAttr', 'extraParams' => $readAuth + array('caption' => 'SACFOR/P'), 'survey_id' => $args['survey_id']);
$attributes = data_entry_helper::getAttributes($attributeOpts, false);
$values['habitat-count'] = count($habitatSamples);
$buddyPairSubmission = submission_builder::wrap_with_images($values, 'sample');
unset($buddyPairSubmission['fields']['habitat-count']);
// Get the list of records implied by the SACFOR data for each habitat. At this point we'll create 1 big list and split
// it across the habitats later.
$occurrences = data_entry_helper::wrap_species_checklist($values, true, array(), array());
// now work out which habitat contains which occurrence
$habitatOccurrences = array();
foreach (array_keys($habitatSamples) as $habitatId) {
$habitatOccurrences[$habitatId] = array();
}
foreach ($occurrences as $uniqueId => $occurrence) {
// for existing occurrences, they are already linked to a sample via the SampleIDX field.
if (!empty($occurrence['model']['fields']['sampleIDX'])) {
$habitatOccurrences['habitat' . ($occurrence['model']['fields']['sampleIDX']['value'] + 1)][] = $occurrence;
} else {
// search the posted data for a habitat SACFOR value for the occurrence row
foreach (array_keys($habitatSamples) as $habitatId) {
$habitatIdx = str_replace('habitat', '', $habitatId);
if (!empty($values["{$uniqueId}:habitat-{$habitatIdx}"])) {
$thisOccurrence = array_merge($occurrence);
$thisOccurrence['model']['fields'][$attributes[0]['fieldname']] = array('value' => $values["{$uniqueId}:habitat-{$habitatIdx}"]);
$habitatOccurrences[$habitatId][] = $thisOccurrence;
}
}
}
}
// now create the submodel data for each habitat.
$buddyPairSubmission['subModels'] = array();
// copy the basic sample data into each set of habitat subsample values
foreach ($habitatSamples as $habitatId => &$habitatSample) {
$habitatIdx = str_replace('habitat', '', $habitatId);
$habitatSample['website_id'] = $values['website_id'];
$habitatSample['survey_id'] = $values['survey_id'];
if (isset($_POST["habitat_sample_id:{$habitatIdx}"])) {
$habitatSample['sample:id'] = $_POST["habitat_sample_id:{$habitatIdx}"];
}
$habitatSample['sample:date'] = $values['sample:date'];
$habitatSample['sample:entered_sref'] = $values['sample:entered_sref'];
$habitatSample['sample:entered_sref_system'] = $values['sample:entered_sref_system'];
$habitatSample['sample:input_form'] = $values['sample:input_form'];
if (isset($_POST["sample:comment:{$habitatIdx}"])) {
$habitatSample['sample:comment'] = $_POST["sample:comment:{$habitatIdx}"];
unset($buddyPairSubmission['fields']["comment:{$habitatIdx}"]);
}
$habitatSubmission = submission_builder::wrap_with_images($habitatSample, 'sample');
if (!isset($habitatSubmission['subModels'])) {
$habitatSubmission['subModels'] = array();
}
$habitatSubmission['subModels'] += $habitatOccurrences[$habitatId];
$buddyPairSubmission['subModels'][] = array('fkId' => 'parent_id', 'model' => $habitatSubmission);
}
return $buddyPairSubmission;
}
/**
* Helper function to simplify building of a submission that contains a single sample
* and multiple occurrences records generated by a species_checklist control.
*
* @param array $values List of the posted values to create the submission from.
* @param boolean $include_if_any_data If true, then any list entry which has any data
* set will be included in the submission. Set this to true when hiding the select checkbox
* in the grid.
* @return array Sample submission array
*/
public static function build_sample_occurrences_list_submission($values, $include_if_any_data = false)
{
// We're mainly submitting to the sample model
$sampleMod = submission_builder::wrap_with_images($values, 'sample');
$occurrences = data_entry_helper::wrap_species_checklist($values, $include_if_any_data);
// Add the occurrences in as subModels
$sampleMod['subModels'] = $occurrences;
return $sampleMod;
}
/**
* Handles the construction of a submission array from a set of form values.
*
* @param array $values Associative array of form data values.
* @param array $args iform parameters.
* @return array Submission structure.
*/
public static function get_submission($values, $args)
{
$fromDate = self::getStartDate($args);
$values['sample:date_start'] = date('Y-m-d', $fromDate);
$dateEnd = strtotime('+' . ($args['weeks'] * 7 - 1) . ' days', $fromDate);
// force max date to today to pass validation.
if ($dateEnd > time()) {
$dateEnd = time();
}
$values['sample:date_end'] = date('Y-m-d', $dateEnd);
$values['sample:date_type'] = 'DD';
$weekData = array();
$countValues = json_decode($values['table-data']);
// existing samples being posted?
$samplesDates = array();
if (!empty($values['samples-dates'])) {
$samplesDates = json_decode($values['samples-dates'], true);
}
unset($values['table-data']);
unset($values['samples-dates']);
$parentSample = submission_builder::wrap_with_images($values, 'sample');
foreach ($countValues as $key => $value) {
$tokens = explode(':', $key);
// consider existing values, or filled in values only
if (($value !== '' || count($tokens) === 6) && preg_match('/^sc([0-9]+):/', $key, $matches)) {
$weekIdx = $matches[1];
if (!isset($weekData["week{$weekIdx}"])) {
$weekData["week{$weekIdx}"] = array();
}
$datelessKey = preg_replace('/^sc([0-9]+):/', 'sc:', $key);
$weekData["week{$weekIdx}"][$datelessKey] = $value;
$presenceKey = preg_replace('/occAttr:[0-9]+(:[0-9]+)?$/', 'present', $datelessKey);
$weekData["week{$weekIdx}"][$presenceKey] = $tokens[1];
}
}
$parentSample['subModels'] = array();
// retrieve any sample data for each week
$weekSampleData = array();
foreach ($values as $key => $value) {
if (preg_match('/^smpAttr(\\d+):(.+)/', $key, $matches)) {
if (!isset($weekSampleData["week{$matches['1']}"])) {
$weekSampleData["week{$matches['1']}"] = array();
}
$weekSampleData["week{$matches['1']}"]["smpAttr:{$matches['2']}"] = $value;
}
}
foreach ($weekData as $week => $data) {
$weekno = substr($week, 4);
$weekstart = strtotime('+' . $weekno . ' weeks', $fromDate);
if (isset($samplesDates[$weekstart])) {
$data['sample:id'] = $samplesDates[$weekstart];
}
$data['sample:date_start'] = date('Y-m-d', $weekstart);
$data['sample:date_end'] = date('Y-m-d', strtotime('+6 days', $weekstart));
$data['sample:date_type'] = 'DD';
$data['website_id'] = $values['website_id'];
$data['survey_id'] = $values['survey_id'];
$data['entered_sref'] = $values['sample:entered_sref'];
$data['entered_sref_system'] = $values['sample:entered_sref_system'];
$data['geom'] = $values['sample:geom'];
if (isset($weekSampleData["week{$weekno}"])) {
$data = array_merge($data, $weekSampleData["week{$weekno}"]);
}
$subSampleAndOccs = data_entry_helper::build_sample_occurrences_list_submission($data);
$parentSample['subModels'][] = array('fkId' => 'parent_id', 'model' => $subSampleAndOccs);
}
return $parentSample;
}
public static function get_splash_subsamples_occurrences_submission($args, $values, $include_if_any_data = false, $zero_attrs = false, $zero_values = array('0', 'None', 'Absent'))
{
$sampleMod = submission_builder::wrap_with_images($values, 'sample');
$subModels = self::create_splash_subsample_occurrence_structure($values, $include_if_any_data, $zero_attrs, $zero_values, $args);
// Add the subsamples/occurrences in as subModels without overwriting others such as a sample image
if (array_key_exists('subModels', $sampleMod)) {
$sampleMod['subModels'] = array_merge($sampleMod['subModels'], $subModels);
} else {
$sampleMod['subModels'] = $subModels;
}
return $sampleMod;
}
