/**
* Save changes to article.
*/
function execute()
{
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$signoffDao =& DAORegistry::getDAO('SignoffDAO');
$journal = Request::getJournal();
$user = Request::getUser();
// Update article
$article =& $this->article;
if ($this->getData('commentsToEditor') != '') {
$article->setCommentsToEditor($this->getData('commentsToEditor'));
}
$article->setDateSubmitted(Core::getCurrentDate());
$article->setSubmissionProgress(0);
$article->stampStatusModified();
$articleDao->updateArticle($article);
// Designate this as the review version by default.
$authorSubmissionDao =& DAORegistry::getDAO('AuthorSubmissionDAO');
$authorSubmission =& $authorSubmissionDao->getAuthorSubmission($article->getId());
AuthorAction::designateReviewVersion($authorSubmission, true);
unset($authorSubmission);
$copyeditInitialSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_INITIAL', ASSOC_TYPE_ARTICLE, $article->getId());
$copyeditAuthorSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_AUTHOR', ASSOC_TYPE_ARTICLE, $article->getId());
$copyeditFinalSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_FINAL', ASSOC_TYPE_ARTICLE, $article->getId());
$copyeditInitialSignoff->setUserId(0);
$copyeditAuthorSignoff->setUserId($user->getId());
$copyeditFinalSignoff->setUserId(0);
$signoffDao->updateObject($copyeditInitialSignoff);
$signoffDao->updateObject($copyeditAuthorSignoff);
$signoffDao->updateObject($copyeditFinalSignoff);
$layoutSignoff = $signoffDao->build('SIGNOFF_LAYOUT', ASSOC_TYPE_ARTICLE, $article->getId());
$layoutSignoff->setUserId(0);
$signoffDao->updateObject($layoutSignoff);
$proofAuthorSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_AUTHOR', ASSOC_TYPE_ARTICLE, $article->getId());
$proofProofreaderSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_PROOFREADER', ASSOC_TYPE_ARTICLE, $article->getId());
$proofLayoutEditorSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_LAYOUT', ASSOC_TYPE_ARTICLE, $article->getId());
$proofAuthorSignoff->setUserId($user->getId());
$proofProofreaderSignoff->setUserId(0);
$proofLayoutEditorSignoff->setUserId(0);
$signoffDao->updateObject($proofAuthorSignoff);
$signoffDao->updateObject($proofProofreaderSignoff);
$signoffDao->updateObject($proofLayoutEditorSignoff);
$sectionEditors = $this->assignEditors($article);
$user =& Request::getUser();
// Update search index
import('classes.search.ArticleSearchIndex');
ArticleSearchIndex::indexArticleMetadata($article);
ArticleSearchIndex::indexArticleFiles($article);
// Send author notification email
import('classes.mail.ArticleMailTemplate');
$mail = new ArticleMailTemplate($article, 'SUBMISSION_ACK', null, null, null, false);
$mail->setFrom($journal->getSetting('contactEmail'), $journal->getSetting('contactName'));
if ($mail->isEnabled()) {
$mail->addRecipient($user->getEmail(), $user->getFullName());
// If necessary, BCC the acknowledgement to someone.
if ($journal->getSetting('copySubmissionAckPrimaryContact')) {
$mail->addBcc($journal->getSetting('contactEmail'), $journal->getSetting('contactName'));
}
if ($journal->getSetting('copySubmissionAckSpecified')) {
$copyAddress = $journal->getSetting('copySubmissionAckAddress');
if (!empty($copyAddress)) {
$mail->addBcc($copyAddress);
}
}
// Also BCC automatically assigned section editors
foreach ($sectionEditors as $sectionEditorEntry) {
$sectionEditor =& $sectionEditorEntry['user'];
$mail->addBcc($sectionEditor->getEmail(), $sectionEditor->getFullName());
unset($sectionEditor);
}
$mail->assignParams(array('authorName' => $user->getFullName(), 'authorUsername' => $user->getUsername(), 'editorialContactSignature' => $journal->getSetting('contactName') . "\n" . $journal->getLocalizedTitle(), 'submissionUrl' => Request::url(null, 'author', 'submission', $article->getId())));
$mail->send();
}
import('classes.article.log.ArticleLog');
import('classes.article.log.ArticleEventLogEntry');
ArticleLog::logEvent($this->articleId, ARTICLE_LOG_ARTICLE_SUBMIT, ARTICLE_LOG_TYPE_AUTHOR, $user->getId(), 'log.author.submitted', array('submissionId' => $article->getId(), 'authorName' => $user->getFullName()));
return $this->articleId;
}
function handleArticleNode(&$journal, &$articleNode, &$issue, &$section, &$article, &$publishedArticle, &$errors, &$user, $isCommandLine, &$dependentItems)
{
$errors = array();
$journalSupportedLocales = array_keys($journal->getSupportedLocaleNames());
// => journal locales must be set up before
$journalPrimaryLocale = $journal->getPrimaryLocale();
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$article = new Article();
$article->setLocale($journalPrimaryLocale);
// FIXME in bug #5543
$article->setJournalId($journal->getId());
$article->setUserId($user->getId());
$article->setSectionId($section->getId());
$article->setStatus(STATUS_PUBLISHED);
$article->setSubmissionProgress(0);
$article->setDateSubmitted(Core::getCurrentDate());
$article->stampStatusModified();
$titleExists = false;
for ($index = 0; $node = $articleNode->getChildByName('title', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleTitleLocaleUnsupported', array('articleTitle' => $node->getValue(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setTitle($node->getValue(), $locale);
$titleExists = true;
}
if (!$titleExists || $article->getTitle($journalPrimaryLocale) == "") {
$errors[] = array('plugins.importexport.native.import.error.articleTitleMissing', array('issueTitle' => $issue->getIssueIdentification(), 'sectionTitle' => $section->getLocalizedTitle()));
return false;
}
for ($index = 0; $node = $articleNode->getChildByName('abstract', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleAbstractLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setAbstract($node->getValue(), $locale);
}
if ($indexingNode = $articleNode->getChildByName('indexing')) {
for ($index = 0; $node = $indexingNode->getChildByName('discipline', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleDisciplineLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setDiscipline($node->getValue(), $locale);
}
for ($index = 0; $node = $indexingNode->getChildByName('type', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleTypeLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setType($node->getValue(), $locale);
}
for ($index = 0; $node = $indexingNode->getChildByName('subject', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleSubjectLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setSubject($node->getValue(), $locale);
}
for ($index = 0; $node = $indexingNode->getChildByName('subject_class', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleSubjectClassLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setSubjectClass($node->getValue(), $locale);
}
if ($coverageNode = $indexingNode->getChildByName('coverage')) {
for ($index = 0; $node = $coverageNode->getChildByName('geographical', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleCoverageGeoLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setCoverageGeo($node->getValue(), $locale);
}
for ($index = 0; $node = $coverageNode->getChildByName('chronological', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleCoverageChronLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setCoverageChron($node->getValue(), $locale);
}
for ($index = 0; $node = $coverageNode->getChildByName('sample', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleCoverageSampleLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setCoverageSample($node->getValue(), $locale);
}
}
}
for ($index = 0; $node = $articleNode->getChildByName('sponsor', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleSponsorLocaleUnsupported', array('articleTitle' => $article->getLocalizedTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setSponsor($node->getValue(), $locale);
}
if ($node = $articleNode->getChildByName('pages')) {
$article->setPages($node->getValue());
}
if ($language = $articleNode->getAttribute('language')) {
$article->setLanguage($language);
}
/* --- Handle authors --- */
$hasErrors = false;
for ($index = 0; $node = $articleNode->getChildByName('author', $index); $index++) {
if (!NativeImportDom::handleAuthorNode($journal, $node, $issue, $section, $article, $authorErrors)) {
$errors = array_merge($errors, $authorErrors);
$hasErrors = true;
}
}
if ($hasErrors) {
return false;
}
/* --- Handle covers --- */
for ($index = 0; $node = $articleNode->getChildByName('cover', $index); $index++) {
if (!NativeImportDom::handleArticleCoverNode($journal, $node, $article, $coverErrors, $isCommandLine)) {
$errors = array_merge($errors, $coverErrors);
$hasErrors = true;
}
}
for ($index = 0; $node = $articleNode->getChildByName('id', $index); $index++) {
switch ($node->getAttribute('type')) {
case 'doi':
$article->setStoredDOI($node->getValue());
break;
}
}
$articleDao->insertArticle($article);
$dependentItems[] = array('article', $article);
// Create submission mangement records
$signoffDao =& DAORegistry::getDAO('SignoffDAO');
$initialCopyeditSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_INITIAL', ASSOC_TYPE_ARTICLE, $article->getId());
$initialCopyeditSignoff->setUserId(0);
$signoffDao->updateObject($initialCopyeditSignoff);
$authorCopyeditSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_AUTHOR', ASSOC_TYPE_ARTICLE, $article->getId());
$authorCopyeditSignoff->setUserId(0);
$signoffDao->updateObject($authorCopyeditSignoff);
$finalCopyeditSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_FINAL', ASSOC_TYPE_ARTICLE, $article->getId());
$finalCopyeditSignoff->setUserId(0);
$signoffDao->updateObject($finalCopyeditSignoff);
$layoutSignoff = $signoffDao->build('SIGNOFF_LAYOUT', ASSOC_TYPE_ARTICLE, $article->getId());
$layoutSignoff->setUserId(0);
$signoffDao->updateObject($layoutSignoff);
$authorProofSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_AUTHOR', ASSOC_TYPE_ARTICLE, $article->getId());
$authorProofSignoff->setUserId(0);
$signoffDao->updateObject($authorProofSignoff);
$proofreaderProofSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_PROOFREADER', ASSOC_TYPE_ARTICLE, $article->getId());
$proofreaderProofSignoff->setUserId(0);
$signoffDao->updateObject($proofreaderProofSignoff);
$layoutProofSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_LAYOUT', ASSOC_TYPE_ARTICLE, $article->getId());
$layoutProofSignoff->setUserId(0);
$signoffDao->updateObject($layoutProofSignoff);
// Log the import in the article event log.
import('classes.article.log.ArticleLog');
import('classes.article.log.ArticleEventLogEntry');
ArticleLog::logEvent($article->getId(), ARTICLE_LOG_ARTICLE_IMPORT, ARTICLE_LOG_TYPE_DEFAULT, 0, 'log.imported', array('userName' => $user->getFullName(), 'articleId' => $article->getId()));
// Insert published article entry.
$publishedArticle = new PublishedArticle();
$publishedArticle->setArticleId($article->getId());
$publishedArticle->setIssueId($issue->getId());
if ($node = $articleNode->getChildByName('date_published')) {
$publishedDate = strtotime($node->getValue());
if ($publishedDate === -1) {
$errors[] = array('plugins.importexport.native.import.error.invalidDate', array('value' => $node->getValue()));
return false;
} else {
$publishedArticle->setDatePublished($publishedDate);
}
}
$node = $articleNode->getChildByName('open_access');
$publishedArticle->setAccessStatus($node ? ARTICLE_ACCESS_OPEN : ARTICLE_ACCESS_ISSUE_DEFAULT);
$publishedArticle->setSeq(REALLY_BIG_NUMBER);
$publishedArticle->setViews(0);
$publishedArticle->setPublicArticleId($articleNode->getAttribute('public_id'));
$publishedArticle->setPubId($publishedArticleDao->insertPublishedArticle($publishedArticle));
$publishedArticleDao->resequencePublishedArticles($section->getId(), $issue->getId());
/* --- Galleys (html or otherwise handled simultaneously) --- */
import('classes.file.ArticleFileManager');
$articleFileManager = new ArticleFileManager($article->getId());
/* --- Handle galleys --- */
$hasErrors = false;
$galleyCount = 0;
for ($index = 0; $index < count($articleNode->children); $index++) {
$node = $articleNode->children[$index];
if ($node->getName() == 'htmlgalley') {
$isHtml = true;
} elseif ($node->getName() == 'galley') {
$isHtml = false;
} else {
continue;
}
if (!NativeImportDom::handleGalleyNode($journal, $node, $issue, $section, $article, $galleyErrors, $isCommandLine, $isHtml, $galleyCount, $articleFileManager)) {
$errors = array_merge($errors, $galleyErrors);
$hasErrors = true;
}
$galleyCount++;
unset($node);
}
if ($hasErrors) {
return false;
}
/* --- Handle supplemental files --- */
$hasErrors = false;
for ($index = 0; $node = $articleNode->getChildByName('supplemental_file', $index); $index++) {
if (!NativeImportDom::handleSuppFileNode($journal, $node, $issue, $section, $article, $suppFileErrors, $isCommandLine, $articleFileManager)) {
$errors = array_merge($errors, $suppFileErrors);
$hasErrors = true;
}
}
if ($hasErrors) {
return false;
}
// Index the inserted article.
import('classes.search.ArticleSearchIndex');
ArticleSearchIndex::indexArticleMetadata($article);
ArticleSearchIndex::indexArticleFiles($article);
return true;
}
/**
* Save changes to article.
*/
function execute()
{
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$journal = Request::getJournal();
// Update article
$article =& $this->article;
if ($this->getData('commentsToEditor') != '') {
$article->setCommentsToEditor($this->getData('commentsToEditor'));
}
$article->setDateSubmitted(Core::getCurrentDate());
$article->setSubmissionProgress(0);
$article->stampStatusModified();
$articleDao->updateArticle($article);
// Designate this as the review version by default.
$authorSubmissionDao =& DAORegistry::getDAO('AuthorSubmissionDAO');
$authorSubmission =& $authorSubmissionDao->getAuthorSubmission($article->getArticleId());
AuthorAction::designateReviewVersion($authorSubmission, true);
unset($authorSubmission);
// Create additional submission mangement records
$copyeditorSubmissionDao =& DAORegistry::getDAO('CopyeditorSubmissionDAO');
$copyeditorSubmission =& new CopyeditorSubmission();
$copyeditorSubmission->setArticleId($article->getArticleId());
$copyeditorSubmission->setCopyeditorId(0);
$copyeditorSubmissionDao->insertCopyeditorSubmission($copyeditorSubmission);
$layoutDao =& DAORegistry::getDAO('LayoutAssignmentDAO');
$layoutAssignment =& new LayoutAssignment();
$layoutAssignment->setArticleId($article->getArticleId());
$layoutAssignment->setEditorId(0);
$layoutDao->insertLayoutAssignment($layoutAssignment);
$proofAssignmentDao =& DAORegistry::getDAO('ProofAssignmentDAO');
$proofAssignment =& new ProofAssignment();
$proofAssignment->setArticleId($article->getArticleId());
$proofAssignment->setProofreaderId(0);
$proofAssignmentDao->insertProofAssignment($proofAssignment);
$sectionEditors = $this->assignEditors($article);
$user =& Request::getUser();
// Update search index
import('search.ArticleSearchIndex');
ArticleSearchIndex::indexArticleMetadata($article);
ArticleSearchIndex::indexArticleFiles($article);
// Send author notification email
import('mail.ArticleMailTemplate');
$mail =& new ArticleMailTemplate($article, 'SUBMISSION_ACK');
$mail->setFrom($journal->getSetting('contactEmail'), $journal->getSetting('contactName'));
if ($mail->isEnabled()) {
$mail->addRecipient($user->getEmail(), $user->getFullName());
// If necessary, BCC the acknowledgement to someone.
if ($journal->getSetting('copySubmissionAckPrimaryContact')) {
$mail->addBcc($journal->getSetting('contactEmail'), $journal->getSetting('contactName'));
}
if ($journal->getSetting('copySubmissionAckSpecified')) {
$copyAddress = $journal->getSetting('copySubmissionAckAddress');
if (!empty($copyAddress)) {
$mail->addBcc($copyAddress);
}
}
// Also BCC automatically assigned section editors
foreach ($sectionEditors as $sectionEditorEntry) {
$sectionEditor =& $sectionEditorEntry['user'];
$mail->addBcc($sectionEditor->getEmail(), $sectionEditor->getFullName());
unset($sectionEditor);
}
$mail->assignParams(array('authorName' => $user->getFullName(), 'authorUsername' => $user->getUsername(), 'editorialContactSignature' => $journal->getSetting('contactName') . "\n" . $journal->getJournalTitle(), 'submissionUrl' => Request::url(null, 'author', 'submission', $article->getArticleId())));
$mail->send();
}
import('article.log.ArticleLog');
import('article.log.ArticleEventLogEntry');
ArticleLog::logEvent($this->articleId, ARTICLE_LOG_ARTICLE_SUBMIT, ARTICLE_LOG_TYPE_AUTHOR, $user->getUserId(), 'log.author.submitted', array('submissionId' => $article->getArticleId(), 'authorName' => $user->getFullName()));
return $this->articleId;
}
/**
* Rebuild the search index for all journals.
*/
function rebuildIndex($log = false)
{
// Clear index
if ($log) {
echo 'Clearing index ... ';
}
$searchDao =& DAORegistry::getDAO('ArticleSearchDAO');
// FIXME Abstract into ArticleSearchDAO?
$searchDao->update('DELETE FROM article_search_object_keywords');
$searchDao->update('DELETE FROM article_search_objects');
$searchDao->update('DELETE FROM article_search_keyword_list');
$searchDao->setCacheDir(Config::getVar('files', 'files_dir') . '/_db');
$searchDao->_dataSource->CacheFlush();
if ($log) {
echo "done\n";
}
// Build index
$journalDao =& DAORegistry::getDAO('JournalDAO');
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$journals =& $journalDao->getJournals();
while (!$journals->eof()) {
$journal =& $journals->next();
$numIndexed = 0;
if ($log) {
echo "Indexing \"", $journal->getLocalizedTitle(), "\" ... ";
}
$articles =& $articleDao->getArticlesByJournalId($journal->getId());
while (!$articles->eof()) {
$article =& $articles->next();
if ($article->getDateSubmitted()) {
ArticleSearchIndex::indexArticleMetadata($article);
ArticleSearchIndex::indexArticleFiles($article);
$numIndexed++;
}
unset($article);
}
if ($log) {
echo $numIndexed, " articles indexed\n";
}
unset($journal);
}
}
/**
* Save changes to article.
*/
function execute()
{
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$signoffDao =& DAORegistry::getDAO('SignoffDAO');
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$ercReviewersDao =& DAORegistry::getDAO('ErcReviewersDAO');
$institutionDao =& DAORegistry::getDAO('InstitutionDAO');
$journal = Request::getJournal();
$user = Request::getUser();
// Update article
$article =& $this->article;
if ($article->getDateSubmitted() == null) {
$year = substr(Core::getCurrentDate(), 0, 4);
$countyear = $articleDao->getSubmissionsForYearCount($year) + 1;
$pSponsor = $article->getArticlePrimarySponsor();
$institution = $institutionDao->getInstitutionById($pSponsor->getInstitutionId());
$article->setProposalId($year . '-' . $countyear . '-' . $institution->getInstitutionAcronym());
}
if ($this->getData('commentsToEditor') != '') {
$article->setCommentsToEditor($this->getData('commentsToEditor'));
}
$article->setDateSubmitted(Core::getCurrentDate());
$article->setSubmissionProgress(0);
$article->stampStatusModified();
$articleDao->updateArticle($article);
// Designate this as the review version by default.
$authorSubmissionDao =& DAORegistry::getDAO('AuthorSubmissionDAO');
$authorSubmission =& $authorSubmissionDao->getAuthorSubmission($article->getId());
AuthorAction::designateReviewVersion($authorSubmission, true);
unset($authorSubmission);
$copyeditInitialSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_INITIAL', ASSOC_TYPE_ARTICLE, $article->getId());
$copyeditAuthorSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_AUTHOR', ASSOC_TYPE_ARTICLE, $article->getId());
$copyeditFinalSignoff = $signoffDao->build('SIGNOFF_COPYEDITING_FINAL', ASSOC_TYPE_ARTICLE, $article->getId());
$copyeditInitialSignoff->setUserId(0);
$copyeditAuthorSignoff->setUserId($user->getId());
$copyeditFinalSignoff->setUserId(0);
$signoffDao->updateObject($copyeditInitialSignoff);
$signoffDao->updateObject($copyeditAuthorSignoff);
$signoffDao->updateObject($copyeditFinalSignoff);
$layoutSignoff = $signoffDao->build('SIGNOFF_LAYOUT', ASSOC_TYPE_ARTICLE, $article->getId());
$layoutSignoff->setUserId(0);
$signoffDao->updateObject($layoutSignoff);
$proofAuthorSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_AUTHOR', ASSOC_TYPE_ARTICLE, $article->getId());
$proofProofreaderSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_PROOFREADER', ASSOC_TYPE_ARTICLE, $article->getId());
$proofLayoutEditorSignoff = $signoffDao->build('SIGNOFF_PROOFREADING_LAYOUT', ASSOC_TYPE_ARTICLE, $article->getId());
$proofAuthorSignoff->setUserId($user->getId());
$proofProofreaderSignoff->setUserId(0);
$proofLayoutEditorSignoff->setUserId(0);
$signoffDao->updateObject($proofAuthorSignoff);
$signoffDao->updateObject($proofProofreaderSignoff);
$signoffDao->updateObject($proofLayoutEditorSignoff);
$sectionEditorsDao =& DAORegistry::getDAO('SectionEditorsDAO');
$sectionEditors =& $sectionEditorsDao->getEditorsBySectionId($journal->getId(), $article->getSectionId());
$user =& Request::getUser();
// Update search index
import('classes.search.ArticleSearchIndex');
ArticleSearchIndex::indexArticleMetadata($article);
ArticleSearchIndex::indexArticleFiles($article);
// Send author notification email
import('classes.mail.ArticleMailTemplate');
$mail = new ArticleMailTemplate($article, null, 'SUBMISSION_ACK', null, null, null, false);
foreach ($sectionEditors as $sectionEditor) {
// If one of the secretary is the chair of the committee, send from the chair, if not, take the last secretary in the array
$from = $mail->getFrom();
if ($ercReviewersDao->isErcReviewer($journal->getId(), $sectionEditor->getId(), REVIEWER_CHAIR)) {
$mail->setFrom($sectionEditor->getEmail(), $sectionEditor->getFullName());
} elseif ($from['email'] == $user->getEmail()) {
$mail->setFrom($sectionEditor->getEmail(), $sectionEditor->getFullName());
}
$mail->addBcc($sectionEditor->getEmail(), $sectionEditor->getFullName());
unset($sectionEditor);
}
if ($mail->isEnabled()) {
$mail->addRecipient($user->getEmail(), $user->getFullName());
if ($journal->getSetting('copySubmissionAckSpecified')) {
$copyAddress = $journal->getSetting('copySubmissionAckAddress');
if (!empty($copyAddress)) {
$mail->addBcc($copyAddress);
}
}
$section = $sectionDao->getSection($article->getSectionId());
$mail->assignParams(array('authorName' => $user->getFullName(), 'authorUsername' => $user->getUsername(), 'address' => $sectionDao->getSettingValue($article->getSectionId(), 'address'), 'bankAccount' => $sectionDao->getSettingValue($article->getSectionId(), 'bankAccount'), 'proposalId' => $article->getProposalId(), 'submissionUrl' => Request::url(null, 'author', 'submission', $article->getId())));
$mail->send();
}
// Send a regular notification to section editors
$lastDecision = $article->getLastSectionDecision();
switch ($lastDecision->getReviewType()) {
case REVIEW_TYPE_INITIAL:
if ($lastDecision->getRound() == 1) {
$message = 'notification.type.articleSubmitted.initialReview';
} else {
$message = 'notification.type.articleReSubmitted.initialReview';
}
break;
case REVIEW_TYPE_PR:
if ($lastDecision->getRound() == 1) {
$message = 'notification.type.articleSubmitted.continuingReview';
} else {
$message = 'notification.type.articleReSubmitted.continuingReview';
}
break;
case REVIEW_TYPE_AMENDMENT:
if ($lastDecision->getRound() == 1) {
$message = 'notification.type.articleSubmitted.PAAmendmentReview';
} else {
$message = 'notification.type.articleReSubmitted.PAAmendmentReview';
}
break;
case REVIEW_TYPE_SAE:
if ($lastDecision->getRound() == 1) {
$message = 'notification.type.articleSubmitted.SAE';
} else {
$message = 'notification.type.articleReSubmitted.SAE';
}
break;
case REVIEW_TYPE_FR:
if ($lastDecision->getRound() == 1) {
$message = 'notification.type.articleSubmitted.EOS';
} else {
$message = 'notification.type.articleReSubmitted.EOS';
}
break;
}
import('lib.pkp.classes.notification.NotificationManager');
$notificationManager = new NotificationManager();
$url = Request::url($journal->getPath(), 'sectionEditor', 'submission', array($article->getId(), 'submissionReview'));
foreach ($sectionEditors as $sectionEditor) {
$notificationManager->createNotification($sectionEditor->getId(), $message, $article->getProposalId(), $url, 1, NOTIFICATION_TYPE_ARTICLE_SUBMITTED);
}
import('classes.article.log.ArticleLog');
import('classes.article.log.ArticleEventLogEntry');
if ($lastDecision->getRound() == 1) {
$message = 'log.author.submitted';
} else {
$message = 'log.author.resubmitted';
}
ArticleLog::logEvent($this->articleId, ARTICLE_LOG_ARTICLE_SUBMIT, ARTICLE_LOG_TYPE_AUTHOR, $user->getId(), $message, array('submissionId' => $article->getProposalId(), 'authorName' => $user->getFullName(), 'reviewType' => Locale::translate($lastDecision->getReviewTypeKey())));
return $this->articleId;
}
function handleArticleNode(&$journal, &$articleNode, &$issue, &$section, &$article, &$publishedArticle, &$errors, &$user, $isCommandLine, &$dependentItems)
{
$errors = array();
$journalSupportedLocales = array_keys($journal->getSupportedLocaleNames());
// => journal locales must be set up before
$journalPrimaryLocale = $journal->getPrimaryLocale();
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$article = new Article();
$article->setJournalId($journal->getJournalId());
$article->setUserId($user->getUserId());
$article->setSectionId($section->getSectionId());
$article->setStatus(STATUS_PUBLISHED);
$article->setSubmissionProgress(0);
$article->setDateSubmitted(Core::getCurrentDate());
$article->stampStatusModified();
$titleExists = false;
for ($index = 0; $node = $articleNode->getChildByName('title', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleTitleLocaleUnsupported', array('articleTitle' => $node->getValue(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setTitle($node->getValue(), $locale);
$titleExists = true;
}
if (!$titleExists || $article->getTitle($journalPrimaryLocale) == "") {
$errors[] = array('plugins.importexport.native.import.error.articleTitleMissing', array('issueTitle' => $issue->getIssueIdentification(), 'sectionTitle' => $section->getSectionTitle()));
return false;
}
for ($index = 0; $node = $articleNode->getChildByName('abstract', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleAbstractLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setAbstract($node->getValue(), $locale);
}
if ($indexingNode = $articleNode->getChildByName('indexing')) {
for ($index = 0; $node = $indexingNode->getChildByName('discipline', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleDisciplineLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setDiscipline($node->getValue(), $locale);
}
for ($index = 0; $node = $indexingNode->getChildByName('type', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleTypeLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setType($node->getValue(), $locale);
}
for ($index = 0; $node = $indexingNode->getChildByName('subject', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleSubjectLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setSubject($node->getValue(), $locale);
}
for ($index = 0; $node = $indexingNode->getChildByName('subject_class', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleSubjectClassLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setSubjectClass($node->getValue(), $locale);
}
if ($coverageNode = $indexingNode->getChildByName('coverage')) {
for ($index = 0; $node = $coverageNode->getChildByName('geographical', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleCoverageGeoLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setCoverageGeo($node->getValue(), $locale);
}
for ($index = 0; $node = $coverageNode->getChildByName('chronological', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleCoverageChronLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setCoverageChron($node->getValue(), $locale);
}
for ($index = 0; $node = $coverageNode->getChildByName('sample', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleCoverageSampleLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setCoverageSample($node->getValue(), $locale);
}
}
}
for ($index = 0; $node = $articleNode->getChildByName('sponsor', $index); $index++) {
$locale = $node->getAttribute('locale');
if ($locale == '') {
$locale = $journalPrimaryLocale;
} elseif (!in_array($locale, $journalSupportedLocales)) {
$errors[] = array('plugins.importexport.native.import.error.articleSponsorLocaleUnsupported', array('articleTitle' => $article->getArticleTitle(), 'issueTitle' => $issue->getIssueIdentification(), 'locale' => $locale));
return false;
}
$article->setSponsor($node->getValue(), $locale);
}
if ($node = $articleNode->getChildByName('pages')) {
$article->setPages($node->getValue());
}
if ($language = $articleNode->getAttribute('language')) {
$article->setLanguage($language);
}
/* --- Handle authors --- */
$hasErrors = false;
for ($index = 0; $node = $articleNode->getChildByName('author', $index); $index++) {
if (!NativeImportDom::handleAuthorNode($journal, $node, $issue, $section, $article, $authorErrors)) {
$errors = array_merge($errors, $authorErrors);
$hasErrors = true;
}
}
if ($hasErrors) {
return false;
}
$articleDao->insertArticle($article);
$dependentItems[] = array('article', $article);
// Create submission mangement records
$copyeditorSubmissionDao =& DAORegistry::getDAO('CopyeditorSubmissionDAO');
$copyeditorSubmission =& new CopyeditorSubmission();
$copyeditorSubmission->setArticleId($article->getArticleId());
$copyeditorSubmission->setCopyeditorId(0);
$copyeditorSubmissionDao->insertCopyeditorSubmission($copyeditorSubmission);
$layoutDao =& DAORegistry::getDAO('LayoutAssignmentDAO');
$layoutAssignment =& new LayoutAssignment();
$layoutAssignment->setArticleId($article->getArticleId());
$layoutAssignment->setEditorId(0);
$layoutAssignment->setDateAcknowledged(Core::getCurrentDate());
// Make sure that imported articles go directly into the Archive. FIXME?
$layoutDao->insertLayoutAssignment($layoutAssignment);
$proofAssignmentDao =& DAORegistry::getDAO('ProofAssignmentDAO');
$proofAssignment =& new ProofAssignment();
$proofAssignment->setArticleId($article->getArticleId());
$proofAssignment->setProofreaderId(0);
$proofAssignmentDao->insertProofAssignment($proofAssignment);
// Log the import in the article event log.
import('article.log.ArticleLog');
import('article.log.ArticleEventLogEntry');
ArticleLog::logEvent($article->getArticleId(), ARTICLE_LOG_ARTICLE_IMPORT, ARTICLE_LOG_TYPE_DEFAULT, 0, 'log.imported', array('userName' => $user->getFullName(), 'articleId' => $article->getArticleId()));
// Insert published article entry.
$publishedArticle =& new PublishedArticle();
$publishedArticle->setArticleId($article->getArticleId());
$publishedArticle->setIssueId($issue->getIssueId());
if ($node = $articleNode->getChildByName('date_published')) {
$publishedDate = strtotime($node->getValue());
if ($publishedDate === -1) {
$errors[] = array('plugins.importexport.native.import.error.invalidDate', array('value' => $node->getValue()));
return false;
} else {
$publishedArticle->setDatePublished($publishedDate);
}
}
$node = $articleNode->getChildByName('open_access');
$publishedArticle->setAccessStatus($node ? 1 : 0);
$publishedArticle->setSeq(REALLY_BIG_NUMBER);
$publishedArticle->setViews(0);
$publishedArticle->setPublicArticleId($articleNode->getAttribute('public_id'));
$publishedArticle->setPubId($publishedArticleDao->insertPublishedArticle($publishedArticle));
$publishedArticleDao->resequencePublishedArticles($section->getSectionId(), $issue->getIssueId());
/* --- Galleys (html or otherwise handled simultaneously) --- */
import('file.ArticleFileManager');
$articleFileManager =& new ArticleFileManager($article->getArticleId());
/* --- Handle galleys --- */
$hasErrors = false;
$galleyCount = 0;
for ($index = 0; $index < count($articleNode->children); $index++) {
$node =& $articleNode->children[$index];
if ($node->getName() == 'htmlgalley') {
$isHtml = true;
} elseif ($node->getName() == 'galley') {
$isHtml = false;
} else {
continue;
}
if (!NativeImportDom::handleGalleyNode($journal, $node, $issue, $section, $article, $galleyErrors, $isCommandLine, $isHtml, $galleyCount, $articleFileManager)) {
$errors = array_merge($errors, $galleyErrors);
$hasErrors = true;
}
$galleyCount++;
}
if ($hasErrors) {
return false;
}
/* --- Handle supplemental files --- */
$hasErrors = false;
for ($index = 0; $node = $articleNode->getChildByName('supplemental_file', $index); $index++) {
if (!NativeImportDom::handleSuppFileNode($journal, $node, $issue, $section, $article, $suppFileErrors, $isCommandLine, $articleFileManager)) {
$errors = array_merge($errors, $suppFileErrors);
$hasErrors = true;
}
}
if ($hasErrors) {
return false;
}
// Index the inserted article.
import('search.ArticleSearchIndex');
ArticleSearchIndex::indexArticleMetadata($article);
ArticleSearchIndex::indexArticleFiles($article);
return true;
}