function output_html($result = array(), $arguments = array())
{
print_header();
print_table_head();
foreach ($result as $no => $line) {
print_table_line($no, $line['day'], $line['counter']);
}
print_footer();
}
function displayGenePairs($sql, $format, $matches)
{
$result = mysql_query($sql) or die("mysql error {$sql}," . mysql_error());
$n = mysql_num_rows($result);
print "<table width=100% border=1>";
if ($format == 1) {
#two gene ID,gi and log(evalue)
$headitems = array("Gene1 ID", "Gene1 GI", "Gene2 ID", "Gene2 GI", "log(e_value)", "Bit Score");
$width = array("20%", "20%", "20%", "20%", "10%", "10%");
$align = array("Center", "Center", "Center", "Center", "Center", "center");
print_table_head($headitems, $width, $align);
for ($i = 0; $i < $n; $i++) {
$row = mysql_fetch_array($result, MYSQL_ASSOC);
if ($matches[$row['gene1_id']] == $row['gene2_id']) {
print "<tr bgcolor=red>";
} else {
print "<tr>";
}
print "<td align=center><a href=genedetail.php?id=" . $row['gene1_id'] . ">" . $row['gene1_id'] . "</a></td>";
if (isset($row['gene1_gi'])) {
$gene1_gi = $row['gene1_gi'];
} else {
$gene1_gi = getGIFromID($row['gene1_id']);
}
print "<td align=center>" . $gene1_gi . "</td>";
print "<td align=center><a href=genedetail.php?id=" . $row['gene2_id'] . ">" . $row['gene2_id'] . "</a></td>";
if (isset($row['gene2_gi'])) {
$gene2_gi = $row['gene2_gi'];
} else {
$gene2_gi = getGIFromID($row['gene2_id']);
}
print "<td align=center>" . $gene2_gi . "</td>";
print "<td align=center>";
printf("%10.2f", $row['log_evalue']);
print " </td>";
print "<td align=center>";
printf("%10.2f", $row['bit_score']);
print " </td>";
print "</tr>\n";
}
}
print "</table>";
}
