/**
* Display the form.
*/
function display()
{
$request = $this->request;
$templateMgr = TemplateManager::getManager($request);
$user = $request->getUser();
$journal = $request->getJournal();
$formLocale = $this->getFormLocale();
$templateMgr->assign('journal', $journal);
$sectionDao = DAORegistry::getDAO('SectionDAO');
$sections = $sectionDao->getByJournalId($journal->getId());
$sectionTitles = $sectionAbstractsRequired = array();
while ($section = $sections->next()) {
$sectionTitles[$section->getId()] = $section->getLocalizedTitle();
$sectionAbstractsRequired[(int) $section->getId()] = (int) (!$section->getAbstractsNotRequired());
unset($section);
}
$templateMgr->assign('sectionOptions', array('0' => __('author.submit.selectSection')) + $sectionTitles);
$templateMgr->assign('sectionAbstractsRequired', $sectionAbstractsRequired);
$countryDao = DAORegistry::getDAO('CountryDAO');
$templateMgr->assign('countries', $countryDao->getCountries());
import('classes.issue.IssueAction');
$issueAction = new IssueAction();
$templateMgr->assign('issueOptions', $issueAction->getIssueOptions());
import('lib.pkp.classes.file.TemporaryFileManager');
$temporaryFileManager = new TemporaryFileManager();
$tempFileId = $this->getData('tempFileId');
if (isset($tempFileId[$formLocale]) && $tempFileId[$formLocale] > 0) {
$submissionFile = $temporaryFileManager->getFile($tempFileId[$formLocale], $user->getId());
$templateMgr->assign('submissionFile', $submissionFile);
}
if ($request->getUserVar('addAuthor') || $request->getUserVar('delAuthor') || $request->getUserVar('moveAuthor')) {
$templateMgr->assign('scrollToAuthor', true);
}
if ($request->getUserVar('destination') == 'queue') {
$templateMgr->assign('publishToIssue', false);
} else {
$templateMgr->assign('issueNumber', $request->getUserVar('issueId'));
$templateMgr->assign('publishToIssue', true);
}
$templateMgr->assign('enablePageNumber', $journal->getSetting('enablePageNumber'));
parent::display();
}
/**
* Fetch the HTML contents of the form.
* @param $request PKPRequest
* return string
*/
function fetch($request)
{
$context = $request->getContext();
$templateMgr = TemplateManager::getManager($request);
$templateMgr->assign('submissionId', $this->getSubmission()->getId());
$templateMgr->assign('stageId', $this->getStageId());
$templateMgr->assign('formParams', $this->getFormParams());
$templateMgr->assign('context', $context);
$journalSettingsDao = DAORegistry::getDAO('JournalSettingsDAO');
$enablePublicArticleId = $journalSettingsDao->getSetting($context->getId(), 'enablePublicArticleId');
$templateMgr->assign('enablePublicArticleId', $enablePublicArticleId);
$enablePageNumber = $journalSettingsDao->getSetting($context->getId(), 'enablePageNumber');
$templateMgr->assign('enablePageNumber', $enablePageNumber);
// include issue possibilities
import('classes.issue.IssueAction');
$issueAction = new IssueAction();
$templateMgr->assign('issueOptions', $issueAction->getIssueOptions());
$publishedArticle = $this->getPublishedArticle();
if ($publishedArticle) {
$templateMgr->assign('publishedArticle', $publishedArticle);
$issueDao = DAORegistry::getDAO('IssueDAO');
$issue = $issueDao->getById($publishedArticle->getIssueId());
if ($issue) {
$templateMgr->assign('issueAccess', $issue->getAccessStatus());
$templateMgr->assign('accessOptions', array(ARTICLE_ACCESS_ISSUE_DEFAULT => __('editor.issues.default'), ARTICLE_ACCESS_OPEN => __('editor.issues.open')));
}
}
// include payment information
// Set up required Payment Related Information
import('classes.payment.ojs.OJSPaymentManager');
$paymentManager = new OJSPaymentManager($request);
$completedPaymentDao = DAORegistry::getDAO('OJSCompletedPaymentDAO');
$publicationFeeEnabled = $paymentManager->publicationEnabled();
$templateMgr->assign('publicationFeeEnabled', $publicationFeeEnabled);
if ($publicationFeeEnabled) {
$templateMgr->assign('publicationPayment', $completedPaymentDao->getPublicationCompletedPayment($context->getId(), $subission->getId()));
}
return parent::fetch($request);
}
/**
* Display the form.
*/
function display()
{
$templateMgr =& TemplateManager::getManager();
$request =& $this->request;
$user =& $request->getUser();
$journal =& $request->getJournal();
$formLocale = $this->getFormLocale();
$templateMgr->assign('journal', $journal);
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$sections =& $sectionDao->getJournalSections($journal->getId());
$sectionTitles = $sectionAbstractsRequired = array();
while ($section =& $sections->next()) {
$sectionTitles[$section->getId()] = $section->getTitle($journal->getPrimaryLocale());
$sectionAbstractsRequired[(int) $section->getId()] = (int) (!$section->getAbstractsNotRequired());
unset($section);
}
$templateMgr->assign('sectionOptions', array('0' => __('author.submit.selectSection')) + $sectionTitles);
$templateMgr->assign('sectionAbstractsRequired', $sectionAbstractsRequired);
$countryDao =& DAORegistry::getDAO('CountryDAO');
$countries =& $countryDao->getCountries();
$templateMgr->assign_by_ref('countries', $countries);
import('classes.issue.IssueAction');
$templateMgr->assign('issueOptions', IssueAction::getIssueOptions());
import('classes.file.TemporaryFileManager');
$temporaryFileManager = new TemporaryFileManager();
$tempFileId = $this->getData('tempFileId');
if (isset($tempFileId[$formLocale]) && $tempFileId[$formLocale] > 0) {
$submissionFile = $temporaryFileManager->getFile($tempFileId[$formLocale], $user->getId());
$templateMgr->assign_by_ref('submissionFile', $submissionFile);
}
if ($request->getUserVar('addAuthor') || $request->getUserVar('delAuthor') || $request->getUserVar('moveAuthor')) {
$templateMgr->assign('scrollToAuthor', true);
}
if ($request->getUserVar('destination') == 'queue') {
$templateMgr->assign('publishToIssue', false);
} else {
$templateMgr->assign('issueNumber', $request->getUserVar('issueId'));
$templateMgr->assign('publishToIssue', true);
}
$templateMgr->assign('enablePageNumber', $journal->getSetting('enablePageNumber'));
// Provide available submission languages. (Convert the array
// of locale symbolic names xx_XX into an associative array
// of symbolic names => readable names.)
$supportedSubmissionLocales = $journal->getSetting('supportedSubmissionLocales');
if (empty($supportedSubmissionLocales)) {
$supportedSubmissionLocales = array($journal->getPrimaryLocale());
}
$templateMgr->assign('supportedSubmissionLocaleNames', array_flip(array_intersect(array_flip(AppLocale::getAllLocales()), $supportedSubmissionLocales)));
parent::display();
}
/**
* Display the form.
*/
function display()
{
$templateMgr =& TemplateManager::getManager();
$user =& Request::getUser();
$journal =& Request::getJournal();
$formLocale = $this->getFormLocale();
$templateMgr->assign('journal', $journal);
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$templateMgr->assign('sectionOptions', array('0' => Locale::translate('author.submit.selectSection')) + $sectionDao->getSectionTitles($journal->getId()));
$countryDao =& DAORegistry::getDAO('CountryDAO');
$countries =& $countryDao->getCountries();
$templateMgr->assign_by_ref('countries', $countries);
import('issue.IssueAction');
$templateMgr->assign('issueOptions', IssueAction::getIssueOptions());
import('file.TemporaryFileManager');
$temporaryFileManager = new TemporaryFileManager();
$tempFileId = $this->getData('tempFileId');
if ($tempFileId[$formLocale] > 0) {
$submissionFile = $temporaryFileManager->getFile($tempFileId[$formLocale], $user->getId());
$templateMgr->assign_by_ref('submissionFile', $submissionFile);
}
if (Request::getUserVar('addAuthor') || Request::getUserVar('delAuthor') || Request::getUserVar('moveAuthor')) {
$templateMgr->assign('scrollToAuthor', true);
}
$jqueryPlugin =& PluginRegistry::getPlugin('generic', 'JQueryPlugin');
if ($jqueryPlugin->isJQueryInstalled()) {
$templateMgr->assign('jqueryPath', $jqueryPlugin->getScriptPath());
$templateMgr->assign('addAuthorUrl', $jqueryPlugin->getScriptPath());
}
if (Request::getUserVar('destination') == 'queue') {
$templateMgr->assign('publishToIssue', false);
} else {
$templateMgr->assign('issueNumber', Request::getUserVar('issueId'));
$templateMgr->assign('publishToIssue', true);
}
parent::display();
}
/**
* @see OAIMetadataFormat#toXml
* TODO:
* <copyright-holder>
* In Isabelle's mapping document:
* Article order in the issue's Table of Contents
*/
function toXml(&$record, $format = null)
{
$article =& $record->getData('article');
$journal =& $record->getData('journal');
$section =& $record->getData('section');
$issue =& $record->getData('issue');
$galleys =& $record->getData('galleys');
$articleId = $article->getId();
// Cache issue ordering information.
static $issueId;
static $sectionSeq;
if (!isset($issueId) || $issueId != $issue->getId()) {
$sectionDao = DAORegistry::getDAO('SectionDAO');
$issueId = $issue->getId();
$sections = $sectionDao->getByIssueId($issueId);
$sectionSeq = array();
$i = 0;
foreach ($sections as $thisSection) {
$sectionSeq[$thisSection->getId()] = $i++;
}
unset($sections);
}
$abbreviation = $journal->getLocalizedSetting('abbreviation');
$printIssn = $journal->getSetting('printIssn');
$onlineIssn = $journal->getSetting('onlineIssn');
$primaryLocale = $article->getLanguage() != '' ? $article->getLanguage() : $journal->getPrimaryLocale();
$publisherInstitution = $journal->getSetting('publisherInstitution');
$datePublished = $article->getDatePublished();
if (!$datePublished) {
$datePublished = $issue->getDatePublished();
}
if ($datePublished) {
$datePublished = strtotime($datePublished);
}
$response = "<article\n" . "\txmlns=\"http://dtd.nlm.nih.gov/publishing/2.3\"\n" . "\txmlns:xlink=\"http://www.w3.org/1999/xlink\"\n" . "\txmlns:mml=\"http://www.w3.org/1998/Math/MathML\"\n" . "\txmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\"\n" . "\txsi:schemaLocation=\"http://dtd.nlm.nih.gov/publishing/2.3\n" . "\thttp://dtd.nlm.nih.gov/publishing/2.3/xsd/journalpublishing.xsd\"\n" . (($s = $section->getLocalizedIdentifyType()) != '' ? "\tarticle-type=\"" . htmlspecialchars(Core::cleanVar($s)) . "\"" : '') . "\txml:lang=\"" . strtoupper(substr($primaryLocale, 0, 2)) . "\">\n" . "\t<front>\n" . "\t\t<journal-meta>\n" . "\t\t\t<journal-id journal-id-type=\"other\">" . htmlspecialchars(Core::cleanVar(($s = Config::getVar('oai', 'nlm_journal_id')) != '' ? $s : $journal->getPath())) . "</journal-id>\n" . "\t\t\t<journal-title>" . htmlspecialchars(Core::cleanVar($journal->getLocalizedName())) . "</journal-title>\n";
// Include translated journal titles
foreach ($journal->getName(null) as $locale => $title) {
if ($locale == $primaryLocale) {
continue;
}
$response .= "\t\t\t<trans-title xml:lang=\"" . strtoupper(substr($locale, 0, 2)) . "\">" . htmlspecialchars(Core::cleanVar($title)) . "</trans-title>\n";
}
$response .= (!empty($onlineIssn) ? "\t\t\t<issn pub-type=\"epub\">" . htmlspecialchars(Core::cleanVar($onlineIssn)) . "</issn>" : '') . (!empty($printIssn) ? "\t\t\t<issn pub-type=\"ppub\">" . htmlspecialchars(Core::cleanVar($printIssn)) . "</issn>" : '') . ($publisherInstitution != '' ? "\t\t\t<publisher><publisher-name>" . htmlspecialchars(Core::cleanVar($publisherInstitution)) . "</publisher-name></publisher>\n" : '') . "\t\t</journal-meta>\n" . "\t\t<article-meta>\n" . "\t\t\t<article-id pub-id-type=\"other\">" . htmlspecialchars(Core::cleanVar($article->getBestArticleId())) . "</article-id>\n" . (($s = $article->getPubId('doi')) ? "\t\t\t<article-id pub-id-type=\"doi\">" . htmlspecialchars(Core::cleanVar($s)) . "</article-id>\n" : '') . "\t\t\t<article-categories><subj-group subj-group-type=\"heading\"><subject>" . htmlspecialchars(Core::cleanVar($section->getLocalizedTitle())) . "</subject></subj-group></article-categories>\n" . "\t\t\t<title-group>\n" . "\t\t\t\t<article-title>" . htmlspecialchars(Core::cleanVar(strip_tags($article->getLocalizedTitle()))) . "</article-title>\n";
// Include translated journal titles
foreach ($article->getTitle(null) as $locale => $title) {
if ($locale == $primaryLocale) {
continue;
}
$response .= "\t\t\t\t<trans-title xml:lang=\"" . strtoupper(substr($locale, 0, 2)) . "\">" . htmlspecialchars(Core::cleanVar(strip_tags($title))) . "</trans-title>\n";
}
$response .= "\t\t\t</title-group>\n" . "\t\t\t<contrib-group>\n";
// Include authors
foreach ($article->getAuthors() as $author) {
$response .= "\t\t\t\t<contrib " . ($author->getPrimaryContact() ? 'corresp="yes" ' : '') . "contrib-type=\"author\">\n" . "\t\t\t\t\t<name name-style=\"western\">\n" . "\t\t\t\t\t\t<surname>" . htmlspecialchars(Core::cleanVar($author->getLastName())) . "</surname>\n" . "\t\t\t\t\t\t<given-names>" . htmlspecialchars(Core::cleanVar($author->getFirstName()) . (($s = $author->getMiddleName()) != '' ? " {$s}" : '')) . "</given-names>\n" . "\t\t\t\t\t</name>\n" . (($s = $author->getLocalizedAffiliation()) != '' ? "\t\t\t\t\t<aff>" . htmlspecialchars(Core::cleanVar($s)) . "</aff>\n" : '') . "\t\t\t\t\t<email>" . htmlspecialchars(Core::cleanVar($author->getEmail())) . "</email>\n" . (($s = $author->getUrl()) != '' ? "\t\t\t\t\t<uri>" . htmlspecialchars(Core::cleanVar($s)) . "</uri>\n" : '') . "\t\t\t\t</contrib>\n";
}
// Include editorships (optimized)
$response .= $this->getEditorialInfo($journal->getId());
$response .= "\t\t\t</contrib-group>\n";
if ($datePublished) {
$response .= "\t\t\t<pub-date pub-type=\"epub\">\n" . "\t\t\t\t<day>" . strftime('%d', $datePublished) . "</day>\n" . "\t\t\t\t<month>" . strftime('%m', $datePublished) . "</month>\n" . "\t\t\t\t<year>" . strftime('%Y', $datePublished) . "</year>\n" . "\t\t\t</pub-date>\n";
}
$response .= ($issue->getShowYear() ? "\t\t\t<pub-date pub-type=\"collection\"><year>" . htmlspecialchars(Core::cleanVar($issue->getYear())) . "</year></pub-date>\n" : '') . ($issue->getShowVolume() ? "\t\t\t<volume>" . htmlspecialchars(Core::cleanVar($issue->getVolume())) . "</volume>\n" : '') . ($issue->getShowNumber() ? "\t\t\t<issue seq=\"" . htmlspecialchars(Core::cleanVar($sectionSeq[$section->getId()] * 100 + $article->getSequence())) . "\">" . htmlspecialchars(Core::cleanVar($issue->getNumber())) . "</issue>\n" : '') . "\t\t\t<issue-id pub-id-type=\"other\">" . htmlspecialchars(Core::cleanVar($issue->getBestIssueId())) . "</issue-id>\n" . ($issue->getShowTitle() ? "\t\t\t<issue-title>" . htmlspecialchars(Core::cleanVar($issue->getLocalizedTitle())) . "</issue-title>\n" : '');
// Include page info, if available and parseable.
$matches = null;
if (PKPString::regexp_match_get('/^[Pp][Pp]?[.]?[ ]?(\\d+)$/', $article->getPages(), $matches)) {
$matchedPage = htmlspecialchars(Core::cleanVar($matches[1]));
$response .= "\t\t\t\t<fpage>{$matchedPage}</fpage><lpage>{$matchedPage}</lpage>\n";
$pageCount = 1;
} elseif (PKPString::regexp_match_get('/^[Pp][Pp]?[.]?[ ]?(\\d+)[ ]?(-|–)[ ]?([Pp][Pp]?[.]?[ ]?)?(\\d+)$/', $article->getPages(), $matches)) {
$matchedPageFrom = htmlspecialchars(Core::cleanVar($matches[1]));
$matchedPageTo = htmlspecialchars(Core::cleanVar($matches[4]));
$response .= "\t\t\t\t<fpage>{$matchedPageFrom}</fpage>\n" . "\t\t\t\t<lpage>{$matchedPageTo}</lpage>\n";
$pageCount = $matchedPageTo - $matchedPageFrom + 1;
}
$response .= "\t\t\t<permissions>\n" . "\t\t\t\t<copyright-statement>" . htmlspecialchars(__('submission.copyrightStatement', array('copyrightYear' => $article->getCopyrightYear(), 'copyrightHolder' => $article->getLocalizedCopyrightHolder()))) . "</copyright-statement>\n" . ($datePublished ? "\t\t\t\t<copyright-year>" . $article->getCopyrightYear() . "</copyright-year>\n" : '') . "\t\t\t\t<license xlink:href=\"" . $article->getLicenseURL() . "\">\n" . (($s = Application::getCCLicenseBadge($article->getLicenseURL())) ? "\t\t\t\t\t<license-p>" . strip_tags($s) . "</license-p>\n" : '') . "\t\t\t\t</license>\n" . "\t\t\t</permissions>\n" . "\t\t\t<self-uri xlink:href=\"" . htmlspecialchars(Core::cleanVar(Request::url($journal->getPath(), 'article', 'view', $article->getBestArticleId()))) . "\" />\n";
// Include galley links
foreach ($article->getGalleys() as $galley) {
$response .= "\t\t\t<self-uri content-type=\"" . htmlspecialchars(Core::cleanVar($galley->getFileType())) . "\" xlink:href=\"" . htmlspecialchars(Core::cleanVar(Request::url($journal->getPath(), 'article', 'view', array($article->getBestArticleId(), $galley->getId())))) . "\" />\n";
}
// Include abstract(s)
$abstract = htmlspecialchars(Core::cleanVar(strip_tags($article->getLocalizedAbstract())));
if (!empty($abstract)) {
$abstract = "<p>{$abstract}</p>";
// $abstract = '<p>' . PKPString::regexp_replace('/\n+/', '</p><p>', $abstract) . '</p>';
$response .= "\t\t\t<abstract xml:lang=\"" . strtoupper(substr($primaryLocale, 0, 2)) . "\">{$abstract}</abstract>\n";
}
if (is_array($article->getAbstract(null))) {
foreach ($article->getAbstract(null) as $locale => $abstract) {
if ($locale == $primaryLocale || empty($abstract)) {
continue;
}
$abstract = htmlspecialchars(Core::cleanVar(strip_tags($abstract)));
if (empty($abstract)) {
continue;
}
$abstract = "<p>{$abstract}</p>";
//$abstract = '<p>' . PKPString::regexp_replace('/\n+/', '</p><p>', $abstract) . '</p>';
$response .= "\t\t\t<abstract-trans xml:lang=\"" . strtoupper(substr($locale, 0, 2)) . "\">{$abstract}</abstract-trans>\n";
}
}
$subjects = array();
if (is_array($article->getSubject(null))) {
foreach ($article->getSubject(null) as $locale => $subject) {
$s = array_map('trim', explode(';', Core::cleanVar($subject)));
if (!empty($s)) {
$subjects[$locale] = $s;
}
}
}
if (!empty($subjects)) {
foreach ($subjects as $locale => $s) {
$response .= "\t\t\t<kwd-group xml:lang=\"" . strtoupper(substr($locale, 0, 2)) . "\">\n";
foreach ($s as $subject) {
$response .= "\t\t\t\t<kwd>" . htmlspecialchars($subject) . "</kwd>\n";
}
$response .= "\t\t\t</kwd-group>\n";
}
}
$response .= (isset($pageCount) ? "\t\t\t<counts><page-count count=\"" . (int) $pageCount . "\" /></counts>\n" : '') . "\t\t</article-meta>\n" . "\t</front>\n";
// Include body text (for search indexing only)
import('classes.search.ArticleSearchIndex');
$text = '';
$galleys = $article->getGalleys();
// Give precedence to HTML galleys, as they're quickest to parse
usort($galleys, create_function('$a, $b', 'return $a->getFileType()==\'text/html\')?-1:1;'));
// Determine any access limitations. If there are, do not
// provide the full-text.
import('classes.issue.IssueAction');
$issueAction = new IssueAction();
$subscriptionRequired = $issueAction->subscriptionRequired($issue);
$isSubscribedDomain = $issueAction->subscribedDomain($journal, $issue->getId(), $article->getId());
if (!$subscriptionRequired || $isSubscribedDomain) {
foreach ($galleys as $galley) {
$parser =& SearchFileParser::fromFile($galley);
if ($parser && $parser->open()) {
while (($s = $parser->read()) !== false) {
$text .= $s;
}
$parser->close();
}
if ($galley->getFileType() == 'text/html') {
$text = strip_tags($text);
}
unset($galley);
// Use the first parseable galley.
if (!empty($text)) {
break;
}
}
}
if (!empty($text)) {
$response .= "\t<body><p>" . htmlspecialchars(Core::cleanVar(Core::cleanVar($text))) . "</p></body>\n";
}
// Add NLM citation info
$filterDao = DAORegistry::getDAO('FilterDAO');
/* @var $filterDao FilterDAO */
$nlmFilters = $filterDao->getObjectsByGroup('submission=>nlm23-article-xml');
assert(count($nlmFilters) == 1);
$nlmFilter = array_pop($nlmFilters);
$nlmXmlDom = new DOMDocument();
$nlmXmlDom->loadXML($nlmFilter->execute($article));
$documentElement =& $nlmXmlDom->documentElement;
// Work-around for hasChildNodes being stupid about whitespace.
$hasChildren = false;
if (isset($documentElement->childNodes)) {
foreach ($documentElement->childNodes as $c) {
if ($c->nodeType == XML_ELEMENT_NODE) {
$hasChildren = true;
}
}
}
// If there were any citations, include them.
if ($hasChildren) {
$innerXml = $nlmXmlDom->saveXML($documentElement);
$response .= "<back>{$innerXml}</back>\n";
}
$response .= "</article>";
return $response;
}
/**
* Show index of published articles by author.
* @param $args array
* @param $request PKPRequest
*/
function authors($args, &$request)
{
$this->validate();
$this->setupTemplate($request, true);
$journal =& $request->getJournal();
$authorDao =& DAORegistry::getDAO('AuthorDAO');
if (isset($args[0]) && $args[0] == 'view') {
// View a specific author
$firstName = $request->getUserVar('firstName');
$middleName = $request->getUserVar('middleName');
$lastName = $request->getUserVar('lastName');
$affiliation = $request->getUserVar('affiliation');
$country = $request->getUserVar('country');
$publishedArticles = $authorDao->getPublishedArticlesForAuthor($journal ? $journal->getId() : null, $firstName, $middleName, $lastName, $affiliation, $country);
// Load information associated with each article.
$journals = array();
$issues = array();
$sections = array();
$issuesUnavailable = array();
$issueDao =& DAORegistry::getDAO('IssueDAO');
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$journalDao =& DAORegistry::getDAO('JournalDAO');
foreach ($publishedArticles as $article) {
$articleId = $article->getId();
$issueId = $article->getIssueId();
$sectionId = $article->getSectionId();
$journalId = $article->getJournalId();
if (!isset($issues[$issueId])) {
import('classes.issue.IssueAction');
$issue =& $issueDao->getIssueById($issueId);
$issues[$issueId] =& $issue;
$issuesUnavailable[$issueId] = IssueAction::subscriptionRequired($issue) && (!IssueAction::subscribedUser($journal, $issueId, $articleId) && !IssueAction::subscribedDomain($journal, $issueId, $articleId));
}
if (!isset($journals[$journalId])) {
$journals[$journalId] =& $journalDao->getById($journalId);
}
if (!isset($sections[$sectionId])) {
$sections[$sectionId] =& $sectionDao->getSection($sectionId, $journalId, true);
}
}
if (empty($publishedArticles)) {
$request->redirect(null, $request->getRequestedPage());
}
$templateMgr =& TemplateManager::getManager();
$templateMgr->assign_by_ref('publishedArticles', $publishedArticles);
$templateMgr->assign_by_ref('issues', $issues);
$templateMgr->assign('issuesUnavailable', $issuesUnavailable);
$templateMgr->assign_by_ref('sections', $sections);
$templateMgr->assign_by_ref('journals', $journals);
$templateMgr->assign('firstName', $firstName);
$templateMgr->assign('middleName', $middleName);
$templateMgr->assign('lastName', $lastName);
$templateMgr->assign('affiliation', $affiliation);
$countryDao =& DAORegistry::getDAO('CountryDAO');
$country = $countryDao->getCountry($country);
$templateMgr->assign('country', $country);
$templateMgr->display('search/authorDetails.tpl');
} else {
// Show the author index
$searchInitial = $request->getUserVar('searchInitial');
$rangeInfo = $this->getRangeInfo('authors');
$authors =& $authorDao->getAuthorsAlphabetizedByJournal(isset($journal) ? $journal->getId() : null, $searchInitial, $rangeInfo);
$templateMgr =& TemplateManager::getManager();
$templateMgr->assign('searchInitial', $request->getUserVar('searchInitial'));
$templateMgr->assign('alphaList', explode(' ', __('common.alphaList')));
$templateMgr->assign_by_ref('authors', $authors);
$templateMgr->display('search/authorIndex.tpl');
}
}
/**
* Display the table of contents
*/
function issueToc($args, $request)
{
$issueId = (int) array_shift($args);
$this->validate($issueId, true);
$issue =& $this->issue;
$this->setupTemplate(EDITOR_SECTION_ISSUES);
$templateMgr =& TemplateManager::getManager();
$journal =& $request->getJournal();
$journalId = $journal->getId();
$journalSettingsDao =& DAORegistry::getDAO('JournalSettingsDAO');
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$enablePublicArticleId = $journalSettingsDao->getSetting($journalId, 'enablePublicArticleId');
$templateMgr->assign('enablePublicArticleId', $enablePublicArticleId);
$enablePageNumber = $journalSettingsDao->getSetting($journalId, 'enablePageNumber');
$templateMgr->assign('enablePageNumber', $enablePageNumber);
$templateMgr->assign('customSectionOrderingExists', $customSectionOrderingExists = $sectionDao->customSectionOrderingExists($issueId));
$templateMgr->assign('issueId', $issueId);
$templateMgr->assign_by_ref('issue', $issue);
$templateMgr->assign('unpublished', !$issue->getPublished());
$templateMgr->assign('issueAccess', $issue->getAccessStatus());
// get issue sections and articles
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticles = $publishedArticleDao->getPublishedArticles($issueId);
$layoutEditorSubmissionDao =& DAORegistry::getDAO('LayoutEditorSubmissionDAO');
$proofedArticleIds = $layoutEditorSubmissionDao->getProofedArticlesByIssueId($issueId);
$templateMgr->assign('proofedArticleIds', $proofedArticleIds);
$currSection = 0;
$counter = 0;
$sections = array();
$sectionCount = 0;
$sectionDao =& DAORegistry::getDAO('SectionDAO');
foreach ($publishedArticles as $article) {
$sectionId = $article->getSectionId();
if ($currSection != $sectionId) {
$lastSectionId = $currSection;
$sectionCount++;
if ($lastSectionId !== 0) {
$sections[$lastSectionId][5] = $customSectionOrderingExists ? $sectionDao->getCustomSectionOrder($issueId, $sectionId) : $sectionCount;
}
// Store next custom order
$currSection = $sectionId;
$counter++;
$sections[$sectionId] = array($sectionId, $article->getSectionTitle(), array($article), $counter, $customSectionOrderingExists ? $sectionDao->getCustomSectionOrder($issueId, $lastSectionId) : $sectionCount - 1, null);
} else {
$sections[$article->getSectionId()][2][] = $article;
}
}
$templateMgr->assign_by_ref('sections', $sections);
$templateMgr->assign('accessOptions', array(ARTICLE_ACCESS_ISSUE_DEFAULT => AppLocale::Translate('editor.issues.default'), ARTICLE_ACCESS_OPEN => AppLocale::Translate('editor.issues.open')));
import('classes.issue.IssueAction');
$templateMgr->assign('issueOptions', IssueAction::getIssueOptions());
$templateMgr->assign('helpTopicId', 'publishing.tableOfContents');
$templateMgr->addJavaScript('lib/pkp/js/lib/jquery/plugins/jquery.tablednd.js');
$templateMgr->addJavaScript('lib/pkp/js/functions/tablednd.js');
$templateMgr->display('editor/issues/issueToc.tpl');
}
/**
* Check whether access to the given article
* is authorized to the requesting party (i.e. the
* Solr server).
*
* @param $article Article
* @return boolean True if authorized, otherwise false.
*/
function _isArticleAccessAuthorized(&$article)
{
// Did we get a published article?
if (!is_a($article, 'PublishedArticle')) {
return false;
}
// Get the article's journal.
$journal = $this->_getJournal($article->getJournalId());
if (!is_a($journal, 'Journal')) {
return false;
}
// Get the article's issue.
$issue = $this->_getIssue($article->getIssueId(), $journal->getId());
if (!is_a($issue, 'Issue')) {
return false;
}
// Only index published articles.
if (!$issue->getPublished() || $article->getStatus() != STATUS_PUBLISHED) {
return false;
}
// Make sure the requesting party is authorized to acces the article/issue.
import('classes.issue.IssueAction');
$issueAction = new IssueAction();
$subscriptionRequired = $issueAction->subscriptionRequired($issue, $journal);
if ($subscriptionRequired) {
$isSubscribedDomain = $issueAction->subscribedDomain($journal, $issue->getId(), $article->getId());
if (!$isSubscribedDomain) {
return false;
}
}
// All checks passed successfully - allow access.
return true;
}
/**
* See SubmissionSearch::formatResults()
*
* @return array An array with the articles, published articles,
* issue, journal, section and the issue availability.
*/
static function formatResults(&$results)
{
$articleDao = DAORegistry::getDAO('ArticleDAO');
$publishedArticleDao = DAORegistry::getDAO('PublishedArticleDAO');
$issueDao = DAORegistry::getDAO('IssueDAO');
$journalDao = DAORegistry::getDAO('JournalDAO');
$sectionDao = DAORegistry::getDAO('SectionDAO');
$publishedArticleCache = array();
$articleCache = array();
$issueCache = array();
$issueAvailabilityCache = array();
$journalCache = array();
$sectionCache = array();
$returner = array();
foreach ($results as $articleId) {
// Get the article, storing in cache if necessary.
if (!isset($articleCache[$articleId])) {
$publishedArticleCache[$articleId] = $publishedArticleDao->getPublishedArticleByArticleId($articleId);
$articleCache[$articleId] = $articleDao->getById($articleId);
}
$article = $articleCache[$articleId];
$publishedArticle = $publishedArticleCache[$articleId];
if ($publishedArticle && $article) {
$sectionId = $article->getSectionId();
if (!isset($sectionCache[$sectionId])) {
$sectionCache[$sectionId] = $sectionDao->getById($sectionId);
}
// Get the journal, storing in cache if necessary.
$journalId = $article->getJournalId();
if (!isset($journalCache[$journalId])) {
$journalCache[$journalId] = $journalDao->getById($journalId);
}
// Get the issue, storing in cache if necessary.
$issueId = $publishedArticle->getIssueId();
if (!isset($issueCache[$issueId])) {
$issue = $issueDao->getById($issueId);
$issueCache[$issueId] = $issue;
import('classes.issue.IssueAction');
$issueAction = new IssueAction();
$issueAvailabilityCache[$issueId] = !$issueAction->subscriptionRequired($issue) || $issueAction->subscribedUser($journalCache[$journalId], $issueId, $articleId) || $issueAction->subscribedDomain($journalCache[$journalId], $issueId, $articleId);
}
// Only display articles from published issues.
if (!$issueCache[$issueId]->getPublished()) {
continue;
}
// Store the retrieved objects in the result array.
$returner[] = array('article' => $article, 'publishedArticle' => $publishedArticleCache[$articleId], 'issue' => $issueCache[$issueId], 'journal' => $journalCache[$journalId], 'issueAvailable' => $issueAvailabilityCache[$issueId], 'section' => $sectionCache[$sectionId]);
}
}
return $returner;
}
/**
* Given an issue, set up the template with all the required variables for
* frontend/objects/issue_toc.tpl to function properly (i.e. current issue
* and view issue).
* @param $issue object The issue to display
* @param $showToc boolean iff false and a custom cover page exists,
* the cover page will be displayed. Otherwise table of contents
* will be displayed.
*/
function _setupIssueTemplate($request, $issue, $showToc = false)
{
$journal = $request->getJournal();
$templateMgr = TemplateManager::getManager($request);
// Determine pre-publication access
// FIXME: Do that. (Bug #8278)
if (!$issue) {
$issue = $this->getAuthorizedContextObject(ASSOC_TYPE_ISSUE);
}
$templateMgr->assign(array('issueIdentification' => $issue->getIssueIdentification(), 'issueTitle' => $issue->getLocalizedTitle(), 'issueSeries' => $issue->getIssueIdentification(array('showTitle' => false))));
$locale = AppLocale::getLocale();
import('classes.file.PublicFileManager');
$publicFileManager = new PublicFileManager();
$templateMgr->assign(array('coverPagePath' => $request->getBaseUrl() . '/' . $publicFileManager->getJournalFilesPath($journal->getId()) . '/', 'locale' => $locale));
if (!$showToc && $issue->getFileName($locale) && $issue->getShowCoverPage($locale) && !$issue->getHideCoverPageCover($locale)) {
$templateMgr->assign(array('fileName' => $issue->getFileName($locale), 'width' => $issue->getWidth($locale), 'height' => $issue->getHeight($locale), 'coverPageAltText' => $issue->getCoverPageAltText($locale), 'originalFileName' => $issue->getOriginalFileName($locale), 'originalFileName' => $issue->getOriginalFileName($locale)));
} else {
$issueGalleyDao = DAORegistry::getDAO('IssueGalleyDAO');
$publishedArticleDao = DAORegistry::getDAO('PublishedArticleDAO');
$templateMgr->assign(array('issueGalleys' => $issueGalleyDao->getByIssueId($issue->getId()), 'publishedArticles' => $publishedArticleDao->getPublishedArticlesInSections($issue->getId(), true)));
$showToc = true;
}
$templateMgr->assign(array('showToc' => $showToc, 'issue' => $issue));
// Subscription Access
import('classes.issue.IssueAction');
$issueAction = new IssueAction();
$subscriptionRequired = $issueAction->subscriptionRequired($issue);
$subscribedUser = $issueAction->subscribedUser($journal);
$subscribedDomain = $issueAction->subscribedDomain($journal);
if ($showToc && $subscriptionRequired && !$subscribedUser && !$subscribedDomain) {
$templateMgr->assign('subscriptionExpiryPartial', true);
// Partial subscription expiry for issue
$partial = $issueAction->subscribedUser($journal, $issue->getId());
if (!$partial) {
$issueAction->subscribedDomain($journal, $issue->getId());
}
$templateMgr->assign('issueExpiryPartial', $partial);
// Partial subscription expiry for articles
$publishedArticleDao = DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticlesTemp =& $publishedArticleDao->getPublishedArticles($issue->getId());
$articleExpiryPartial = array();
foreach ($publishedArticlesTemp as $publishedArticle) {
$partial = $issueAction->subscribedUser($journal, $issue->getId(), $publishedArticle->getId());
if (!$partial) {
$issueAction->subscribedDomain($journal, $issue->getId(), $publishedArticle->getId());
}
$articleExpiryPartial[$publishedArticle->getId()] = $partial;
}
$templateMgr->assign('articleExpiryPartial', $articleExpiryPartial);
}
$templateMgr->assign(array('showGalleyLinks' => !$subscriptionRequired || $journal->getSetting('showGalleyLinks'), 'hasAccess' => !$subscriptionRequired || $issue->getAccessStatus() == ISSUE_ACCESS_OPEN || $subscribedUser || $subscribedDomain));
import('classes.payment.ojs.OJSPaymentManager');
$paymentManager = new OJSPaymentManager($request);
if ($paymentManager->onlyPdfEnabled()) {
$templateMgr->assign('restrictOnlyPdf', true);
}
if ($paymentManager->purchaseArticleEnabled()) {
$templateMgr->assign('purchaseArticleEnabled', true);
}
if ($styleFileName = $issue->getStyleFileName()) {
import('classes.file.PublicFileManager');
$publicFileManager = new PublicFileManager();
$templateMgr->addStyleSheet($request->getBaseUrl() . '/' . $publicFileManager->getJournalFilesPath($journal->getId()) . '/' . $styleFileName);
}
}
function submissionEditing($args)
{
$articleId = isset($args[0]) ? (int) $args[0] : 0;
list($journal, $submission) = SubmissionEditHandler::validate($articleId, SECTION_EDITOR_ACCESS_EDIT);
parent::setupTemplate(true, $articleId);
$useCopyeditors = $journal->getSetting('useCopyeditors');
$useLayoutEditors = $journal->getSetting('useLayoutEditors');
$useProofreaders = $journal->getSetting('useProofreaders');
// check if submission is accepted
$round = isset($args[1]) ? $args[1] : $submission->getCurrentRound();
$editorDecisions = $submission->getDecisions($round);
$lastDecision = count($editorDecisions) >= 1 ? $editorDecisions[count($editorDecisions) - 1]['decision'] : null;
$submissionAccepted = $lastDecision == SUBMISSION_EDITOR_DECISION_ACCEPT ? true : false;
$templateMgr =& TemplateManager::getManager();
$templateMgr->assign_by_ref('submission', $submission);
$templateMgr->assign_by_ref('submissionFile', $submission->getSubmissionFile());
$templateMgr->assign_by_ref('copyeditFile', $submission->getCopyeditFile());
$templateMgr->assign_by_ref('initialCopyeditFile', $submission->getInitialCopyeditFile());
$templateMgr->assign_by_ref('editorAuthorCopyeditFile', $submission->getEditorAuthorCopyeditFile());
$templateMgr->assign_by_ref('finalCopyeditFile', $submission->getFinalCopyeditFile());
$templateMgr->assign_by_ref('suppFiles', $submission->getSuppFiles());
$templateMgr->assign_by_ref('copyeditor', $submission->getCopyeditor());
$roleDao =& DAORegistry::getDAO('RoleDAO');
$user =& Request::getUser();
$templateMgr->assign('isEditor', $roleDao->roleExists($journal->getJournalId(), $user->getUserId(), ROLE_ID_EDITOR));
import('issue.IssueAction');
$templateMgr->assign('issueOptions', IssueAction::getIssueOptions());
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticle =& $publishedArticleDao->getPublishedArticleByArticleId($submission->getArticleId());
$templateMgr->assign_by_ref('publishedArticle', $publishedArticle);
$templateMgr->assign('useCopyeditors', $useCopyeditors);
$templateMgr->assign('useLayoutEditors', $useLayoutEditors);
$templateMgr->assign('useProofreaders', $useProofreaders);
$templateMgr->assign_by_ref('proofAssignment', $submission->getProofAssignment());
$templateMgr->assign_by_ref('layoutAssignment', $submission->getLayoutAssignment());
$templateMgr->assign('submissionAccepted', $submissionAccepted);
// Set up required Payment Related Information
import('payment.ojs.OJSPaymentManager');
$paymentManager =& OJSPaymentManager::getManager();
$completedPaymentDAO =& DAORegistry::getDAO('OJSCompletedPaymentDAO');
$publicationFeeEnabled = $paymentManager->publicationEnabled();
$templateMgr->assign('publicatonFeeEnabled', $publicationFeeEnabled);
if ($publicationFeeEnabled) {
$templateMgr->assign_by_ref('publicationPayment', $completedPaymentDAO->getPublicationCompletedPayment($journal->getJournalId(), $articleId));
}
$templateMgr->assign('helpTopicId', 'editorial.sectionEditorsRole.editing');
$templateMgr->display('sectionEditor/submissionEditing.tpl');
}
/**
* View the submission editing page.
* @param $args array
* @param $request PKPRequest
*/
function submissionEditing($args, $request)
{
$articleId = isset($args[0]) ? (int) $args[0] : 0;
$this->validate($articleId, SECTION_EDITOR_ACCESS_EDIT);
$journal =& $request->getJournal();
$submission =& $this->submission;
$this->setupTemplate(true, $articleId);
$useCopyeditors = $journal->getSetting('useCopyeditors');
$useLayoutEditors = $journal->getSetting('useLayoutEditors');
$useProofreaders = $journal->getSetting('useProofreaders');
// check if submission is accepted
$round = isset($args[1]) ? $args[1] : $submission->getCurrentRound();
$editorDecisions = $submission->getDecisions($round);
$lastDecision = count($editorDecisions) >= 1 ? $editorDecisions[count($editorDecisions) - 1]['decision'] : null;
$submissionAccepted = $lastDecision == SUBMISSION_EDITOR_DECISION_ACCEPT ? true : false;
$templateMgr =& TemplateManager::getManager();
$templateMgr->assign_by_ref('submission', $submission);
$templateMgr->assign_by_ref('submissionFile', $submission->getSubmissionFile());
$templateMgr->assign_by_ref('copyeditFile', $submission->getFileBySignoffType('SIGNOFF_COPYEDITING_INITIAL'));
$templateMgr->assign_by_ref('initialCopyeditFile', $submission->getFileBySignoffType('SIGNOFF_COPYEDITING_INITIAL'));
$templateMgr->assign_by_ref('editorAuthorCopyeditFile', $submission->getFileBySignoffType('SIGNOFF_COPYEDITING_AUTHOR'));
$templateMgr->assign_by_ref('finalCopyeditFile', $submission->getFileBySignoffType('SIGNOFF_COPYEDITING_FINAL'));
$templateMgr->assign_by_ref('suppFiles', $submission->getSuppFiles());
$templateMgr->assign_by_ref('copyeditor', $submission->getUserBySignoffType('SIGNOFF_COPYEDITING_INITIAL'));
$roleDao =& DAORegistry::getDAO('RoleDAO');
$user =& Request::getUser();
$templateMgr->assign('isEditor', $roleDao->userHasRole($journal->getId(), $user->getId(), ROLE_ID_EDITOR));
import('classes.issue.IssueAction');
$templateMgr->assign('issueOptions', IssueAction::getIssueOptions());
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticle =& $publishedArticleDao->getPublishedArticleByArticleId($submission->getId());
$templateMgr->assign_by_ref('publishedArticle', $publishedArticle);
$templateMgr->assign('useCopyeditors', $useCopyeditors);
$templateMgr->assign('useLayoutEditors', $useLayoutEditors);
$templateMgr->assign('useProofreaders', $useProofreaders);
$templateMgr->assign('submissionAccepted', $submissionAccepted);
$templateMgr->assign('templates', $journal->getSetting('templates'));
// Set up required Payment Related Information
import('classes.payment.ojs.OJSPaymentManager');
$paymentManager = new OJSPaymentManager($request);
$completedPaymentDao =& DAORegistry::getDAO('OJSCompletedPaymentDAO');
$publicationFeeEnabled = $paymentManager->publicationEnabled();
$templateMgr->assign('publicationFeeEnabled', $publicationFeeEnabled);
if ($publicationFeeEnabled) {
$templateMgr->assign_by_ref('publicationPayment', $completedPaymentDao->getPublicationCompletedPayment($journal->getId(), $articleId));
}
$templateMgr->assign('helpTopicId', 'editorial.sectionEditorsRole.editing');
$templateMgr->display('sectionEditor/submissionEditing.tpl');
}
/**
* Validation
* @param $request PKPRequest
* @param $articleId int
*/
function validate(&$request, $articleId)
{
parent::validate();
$journal =& $request->getJournal();
$journalId = $journal->getId();
$journalSettingsDao =& DAORegistry::getDAO('JournalSettingsDAO');
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$article =& $publishedArticleDao->getPublishedArticleByArticleId($articleId);
// Bring in comment constants
$commentDao =& DAORegistry::getDAO('CommentDAO');
$enableComments = $journal->getSetting('enableComments');
if (!Validation::isLoggedIn() && $journalSettingsDao->getSetting($journalId, 'restrictArticleAccess') || $article && !$article->getEnableComments() || $enableComments != COMMENTS_ANONYMOUS && $enableComments != COMMENTS_AUTHENTICATED && $enableComments != COMMENTS_UNAUTHENTICATED) {
Validation::redirectLogin();
}
// Subscription Access
$issueDao =& DAORegistry::getDAO('IssueDAO');
$issue =& $issueDao->getIssueByArticleId($articleId);
if (isset($issue) && isset($article)) {
import('classes.issue.IssueAction');
$subscriptionRequired = IssueAction::subscriptionRequired($issue);
$subscribedUser = IssueAction::subscribedUser($journal, $issue->getId(), $articleId);
if (!(!$subscriptionRequired || $article->getAccessStatus() == ARTICLE_ACCESS_OPEN || $subscribedUser)) {
$request->redirect(null, 'index');
}
} else {
$request->redirect(null, 'index');
}
$this->issue =& $issue;
$this->article =& $article;
return true;
}
/**
* Given an issue, set up the template with all the required variables for
* frontend/objects/issue_toc.tpl to function properly (i.e. current issue
* and view issue).
* @param $issue object The issue to display
* @param $showToc boolean iff false and a custom cover page exists,
* the cover page will be displayed. Otherwise table of contents
* will be displayed.
*/
function _setupIssueTemplate($request, $issue, $showToc = false)
{
$journal = $request->getJournal();
$templateMgr = TemplateManager::getManager($request);
// Determine pre-publication access
// FIXME: Do that. (Bug #8278)
if (!$issue) {
$issue = $this->getAuthorizedContextObject(ASSOC_TYPE_ISSUE);
}
$templateMgr->assign(array('issueIdentification' => $issue->getIssueIdentification(), 'issueTitle' => $issue->getLocalizedTitle(), 'issueSeries' => $issue->getIssueIdentification(array('showTitle' => false))));
$locale = AppLocale::getLocale();
$templateMgr->assign(array('locale' => $locale));
$issueGalleyDao = DAORegistry::getDAO('IssueGalleyDAO');
$publishedArticleDao = DAORegistry::getDAO('PublishedArticleDAO');
$templateMgr->assign(array('issue' => $issue, 'issueGalleys' => $issueGalleyDao->getByIssueId($issue->getId()), 'publishedArticles' => $publishedArticleDao->getPublishedArticlesInSections($issue->getId(), true)));
// Subscription Access
import('classes.issue.IssueAction');
$issueAction = new IssueAction();
$subscriptionRequired = $issueAction->subscriptionRequired($issue);
$subscribedUser = $issueAction->subscribedUser($journal);
$subscribedDomain = $issueAction->subscribedDomain($journal);
if ($subscriptionRequired && !$subscribedUser && !$subscribedDomain) {
$templateMgr->assign('subscriptionExpiryPartial', true);
// Partial subscription expiry for issue
$partial = $issueAction->subscribedUser($journal, $issue->getId());
if (!$partial) {
$issueAction->subscribedDomain($journal, $issue->getId());
}
$templateMgr->assign('issueExpiryPartial', $partial);
// Partial subscription expiry for articles
$publishedArticleDao = DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticlesTemp =& $publishedArticleDao->getPublishedArticles($issue->getId());
$articleExpiryPartial = array();
foreach ($publishedArticlesTemp as $publishedArticle) {
$partial = $issueAction->subscribedUser($journal, $issue->getId(), $publishedArticle->getId());
if (!$partial) {
$issueAction->subscribedDomain($journal, $issue->getId(), $publishedArticle->getId());
}
$articleExpiryPartial[$publishedArticle->getId()] = $partial;
}
$templateMgr->assign('articleExpiryPartial', $articleExpiryPartial);
}
$templateMgr->assign(array('hasAccess' => !$subscriptionRequired || $issue->getAccessStatus() == ISSUE_ACCESS_OPEN || $subscribedUser || $subscribedDomain));
import('classes.payment.ojs.OJSPaymentManager');
$paymentManager = new OJSPaymentManager($request);
if ($paymentManager->onlyPdfEnabled()) {
$templateMgr->assign('restrictOnlyPdf', true);
}
if ($paymentManager->purchaseArticleEnabled()) {
$templateMgr->assign('purchaseArticleEnabled', true);
}
}
/**
* Given an issue, set up the template with all the required variables for
* issues/view.tpl to function properly.
* @param $issue object The issue to display
* @param $showToc boolean iff false and a custom cover page exists,
* the cover page will be displayed. Otherwise table of contents
* will be displayed.
*/
function setupIssueTemplate(&$issue, $showToc = false)
{
$journal =& Request::getJournal();
$journalId = $journal->getJournalId();
$templateMgr =& TemplateManager::getManager();
if (isset($issue) && ($issue->getPublished() || Validation::isEditor($journalId) || Validation::isLayoutEditor($journalId) || Validation::isProofreader($journalId)) && $issue->getJournalId() == $journalId) {
$issueHeadingTitle = $issue->getIssueIdentification(false, true);
$issueCrumbTitle = $issue->getIssueIdentification(false, true);
$locale = Locale::getLocale();
import('file.PublicFileManager');
$publicFileManager =& new PublicFileManager();
$coverPagePath = Request::getBaseUrl() . '/';
$coverPagePath .= $publicFileManager->getJournalFilesPath($journalId) . '/';
$templateMgr->assign('coverPagePath', $coverPagePath);
$templateMgr->assign('locale', $locale);
if (!$showToc && $issue->getFileName($locale) && $issue->getShowCoverPage($locale) && !$issue->getHideCoverPageCover($locale)) {
$templateMgr->assign('fileName', $issue->getFileName($locale));
$templateMgr->assign('width', $issue->getWidth($locale));
$templateMgr->assign('height', $issue->getHeight($locale));
$templateMgr->assign('coverPageAltText', $issue->getCoverPageAltText($locale));
$templateMgr->assign('originalFileName', $issue->getOriginalFileName($locale));
$showToc = false;
} else {
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticles =& $publishedArticleDao->getPublishedArticlesInSections($issue->getIssueId(), true);
$publicFileManager =& new PublicFileManager();
$templateMgr->assign('publishedArticles', $publishedArticles);
$showToc = true;
}
$templateMgr->assign('showToc', $showToc);
$templateMgr->assign('issueId', $issue->getBestIssueId());
$templateMgr->assign('issue', $issue);
// Subscription Access
import('issue.IssueAction');
$subscriptionRequired = IssueAction::subscriptionRequired($issue);
$subscribedUser = IssueAction::subscribedUser($journal);
$subscribedDomain = IssueAction::subscribedDomain($journal);
$subscriptionExpiryPartial = $journal->getSetting('subscriptionExpiryPartial');
if ($showToc && $subscriptionRequired && !$subscribedUser && !$subscribedDomain && $subscriptionExpiryPartial) {
$templateMgr->assign('subscriptionExpiryPartial', true);
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticlesTemp =& $publishedArticleDao->getPublishedArticles($issue->getIssueId(), null, true);
$articleExpiryPartial = array();
foreach ($publishedArticlesTemp as $publishedArticle) {
$partial = IssueAction::subscribedUser($journal, $issue->getIssueId(), $publishedArticle->getArticleId());
if (!$partial) {
IssueAction::subscribedDomain($journal, $issue->getIssueId(), $publishedArticle->getArticleId());
}
$articleExpiryPartial[$publishedArticle->getArticleId()] = $partial;
}
$templateMgr->assign_by_ref('articleExpiryPartial', $articleExpiryPartial);
}
$templateMgr->assign('subscriptionRequired', $subscriptionRequired);
$templateMgr->assign('subscribedUser', $subscribedUser);
$templateMgr->assign('subscribedDomain', $subscribedDomain);
$templateMgr->assign('showGalleyLinks', $journal->getSetting('showGalleyLinks'));
import('payment.ojs.OJSPaymentManager');
$paymentManager =& OJSPaymentManager::getManager();
if ($paymentManager->onlyPdfEnabled()) {
$templateMgr->assign('restrictOnlyPdf', true);
}
} else {
$issueCrumbTitle = Locale::translate('archive.issueUnavailable');
$issueHeadingTitle = Locale::translate('archive.issueUnavailable');
}
if ($styleFileName = $issue->getStyleFileName()) {
import('file.PublicFileManager');
$publicFileManager =& new PublicFileManager();
$templateMgr->addStyleSheet(Request::getBaseUrl() . '/' . $publicFileManager->getJournalFilesPath($journalId) . '/' . $styleFileName);
}
$templateMgr->assign('pageCrumbTitleTranslated', $issueCrumbTitle);
$templateMgr->assign('issueHeadingTitle', $issueHeadingTitle);
}
/**
* Display the form.
*/
function display($articleId)
{
$this->editArticleID = $articleId;
//get the information of the article, which should be edited
$user =& Request::getUser();
$journal =& Request::getJournal();
$formLocale = $this->getFormLocale();
$templateMgr =& TemplateManager::getManager();
//Author
$authorDao =& DAORegistry::getDAO('AuthorDAO');
//authorsObjectsArray
$authorObjects =& $authorDao->getAuthorsByArticle($articleId);
$authors = array();
$n = 0;
foreach ($authorObjects as $authorData) {
$author = get_object_vars($authorData);
$authors[$n] = $author["_data"];
$n++;
}
$templateMgr->assign('authors', $authors);
//title, abstract, orig. journal/ conf. and date published
$rpositoryDao =& DAORegistry::getDAO('RpositoryDAO');
$articleSettings = $rpositoryDao->getArtStatement($articleId);
//title
$title[$formLocale] = $articleSettings['sv1'];
$templateMgr->assign('title', $title);
//abstract
$abstractAndOrigJournal = $articleSettings['sv2'];
$patternAbstract = '/<p id="originalPub">(.*)/';
$abstract[$formLocale] = preg_replace($patternAbstract, '', $abstractAndOrigJournal);
$templateMgr->assign('abstract', $abstract);
//originalJournal
$patternOrigJournal = '/(.*)<p id="originalPub">/';
$originalJournal = preg_replace($patternOrigJournal, '', $abstractAndOrigJournal);
$originalJournal = preg_replace('/<\\/p>/', '', $originalJournal);
if (preg_replace('/' . $originalJournal . '/', '', $abstractAndOrigJournal) == '') {
$originalJournal = '';
}
$templateMgr->assign('originalJournal', $originalJournal);
//date published
$datePublished = $articleSettings['date_published'];
$templateMgr->assign('datePublished', $datePublished);
//File
$articleFileDao =& DAORegistry::getDAO('ArticleFileDAO');
$articleFileObjects =& $articleFileDao->getArticleFilesByArticle($articleId);
foreach ($articleFileObjects as $articleFile) {
$articleFileVars = get_object_vars($articleFile);
if ($articleFileVars["_data"]["fileType"] != "txt/plain") {
if ($articleFileVars["_data"]["type"] == "submission/original") {
$templateMgr->assign('submissionFile', $articleFile);
$templateMgr->assign('pastSubmissionFile', $articleFile);
}
if ($articleFileVars["_data"]["type"] == "supp") {
$templateMgr->assign('supplementaryFile', $articleFile);
$templateMgr->assign('pastSupplementaryFile', $articleFile);
}
}
}
//Indexing
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$article =& $articleDao->getArticle($articleId);
/* $language = $article->getLanguage();
$templateMgr->assign('language', $language);
*/
//Sponsor
$sponsor[$formLocale] = $article->getSponsor($formLocale);
$templateMgr->assign('sponsor', $sponsor);
/*
//References
$citation= $article->getCitations();
$templateMgr->assign('citations', $citation);
*/
//SectionId
$articleSectionId = $article->getSectionId();
$templateMgr->assign('sectionId', $articleSectionId);
$templateMgr->assign('journal', $journal);
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$sections =& $sectionDao->getJournalSections($journal->getId());
$sectionTitles = $sectionAbstractsRequired = array();
while ($section =& $sections->next()) {
$sectionTitles[$section->getId()] = $section->getLocalizedTitle();
$sectionAbstractsRequired[(int) $section->getId()] = (int) (!$section->getAbstractsNotRequired());
unset($section);
}
$templateMgr->assign('sectionOptions', array('0' => __('author.submit.selectSection')) + $sectionTitles);
$templateMgr->assign('sectionAbstractsRequired', $sectionAbstractsRequired);
$countryDao =& DAORegistry::getDAO('CountryDAO');
$countries =& $countryDao->getCountries();
$templateMgr->assign_by_ref('countries', $countries);
import('classes.issue.IssueAction');
$templateMgr->assign('issueOptions', IssueAction::getIssueOptions());
import('classes.file.TemporaryFileManager');
$temporaryFileManager = new TemporaryFileManager();
$tempFileId = $this->getData('tempFileId');
if (isset($tempFileId[$formLocale]) && $tempFileId[$formLocale] > 0) {
$submissionFile = $temporaryFileManager->getFile($tempFileId[$formLocale], $user->getId());
$templateMgr->assign_by_ref('submissionFile', $submissionFile);
}
$tempSupplFileId = $this->getData('tempSupplFileId');
if (isset($tempSupplFileId[$formLocale]) && $tempSupplFileId[$formLocale] > 0) {
$supplementaryFile = $temporaryFileManager->getFile($tempSupplFileId[$formLocale], $user->getId());
$templateMgr->assign_by_ref('supplementaryFile', $supplementaryFile);
}
if (Request::getUserVar('addAuthor') || Request::getUserVar('delAuthor') || Request::getUserVar('moveAuthor')) {
$templateMgr->assign('scrollToAuthor', true);
}
if (Request::getUserVar('destination') == 'queue') {
$templateMgr->assign('publishToIssue', false);
} else {
$templateMgr->assign('issueNumber', Request::getUserVar('issueId'));
$templateMgr->assign('publishToIssue', true);
}
$templateMgr->assign('enablePageNumber', $journal->getSetting('enablePageNumber'));
parent::display();
}
/**
* Checks if user has subscription
* @return bool
*/
function subscribedUser(&$journal, $issueId = null, $articleId = null)
{
$user =& Request::getUser();
$subscriptionDao =& DAORegistry::getDAO('SubscriptionDAO');
$result = false;
if (isset($user) && isset($journal)) {
if (IssueAction::allowedPrePublicationAccess($journal)) {
$result = true;
} else {
$result = $subscriptionDao->isValidSubscription(null, null, $user->getUserId(), $journal->getJournalId());
}
// If no valid subscription, check if there is an expired subscription
// that was valid during publication date of requested content
if (!$result && $journal->getSetting('subscriptionExpiryPartial')) {
if (isset($articleId)) {
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticle =& $publishedArticleDao->getPublishedArticleByArticleId($articleId);
if (isset($publishedArticle)) {
import('subscription.SubscriptionDAO');
$result = $subscriptionDao->isValidSubscription(null, null, $user->getUserId(), $journal->getJournalId(), SUBSCRIPTION_DATE_END, $publishedArticle->getDatePublished());
}
} else {
if (isset($issueId)) {
$issueDao =& DAORegistry::getDAO('IssueDAO');
$issue =& $issueDao->getIssueById($issueId);
if (isset($issue) && $issue->getPublished()) {
import('subscription.SubscriptionDAO');
$result = $subscriptionDao->isValidSubscription(null, null, $user->getUserId(), $journal->getJournalId(), SUBSCRIPTION_DATE_END, $issue->getDatePublished());
}
}
}
}
}
HookRegistry::call('IssueAction::subscribedUser', array(&$journal, &$result));
return $result;
}
/**
* Validation
*/
function validate($articleId, $galleyId = null)
{
parent::validate(true);
import('issue.IssueAction');
$journal =& Request::getJournal();
$journalId = $journal->getJournalId();
$article = $publishedArticle = $issue = null;
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
if ($journal->getSetting('enablePublicArticleId')) {
$publishedArticle =& $publishedArticleDao->getPublishedArticleByBestArticleId($journalId, $articleId);
} else {
$publishedArticle =& $publishedArticleDao->getPublishedArticleByArticleId((int) $articleId, $journalId);
}
$issueDao =& DAORegistry::getDAO('IssueDAO');
if (isset($publishedArticle)) {
$issue =& $issueDao->getIssueByArticleId($publishedArticle->getArticleId(), $journalId);
} else {
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$article =& $articleDao->getArticle((int) $articleId, $journalId);
}
// If this is an editorial user who can view unpublished/unscheduled
// articles, bypass further validation.
if (($article || $publishedArticle) && IssueAction::allowedPrePublicationAccess($journal)) {
return array($journal, $issue, $publishedArticle ? $publishedArticle : $article);
}
// Make sure the reader has rights to view the article/issue.
if ($issue && $issue->getPublished()) {
$subscriptionRequired = IssueAction::subscriptionRequired($issue);
$isSubscribedDomain = IssueAction::subscribedDomain($journal, $issue->getIssueId(), $articleId);
// Check if login is required for viewing.
if (!$isSubscribedDomain && !Validation::isLoggedIn() && $journal->getSetting('restrictArticleAccess') && isset($galleyId) && $galleyId != 0) {
Validation::redirectLogin();
}
// bypass all validation if subscription based on domain or ip is valid
// or if the user is just requesting the abstract
if (!$isSubscribedDomain && $subscriptionRequired && (isset($galleyId) && $galleyId != 0)) {
// Subscription Access
$subscribedUser = IssueAction::subscribedUser($journal, $issue->getIssueId(), $articleId);
if (!(!$subscriptionRequired || $publishedArticle->getAccessStatus() || $subscribedUser)) {
// if payment information is enabled,
import('payment.ojs.OJSPaymentManager');
$paymentManager =& OJSPaymentManager::getManager();
if ($paymentManager->purchaseArticleEnabled() || $paymentManager->membershipEnabled()) {
/* if only pdf files are being restricted, then approve all non-pdf galleys
* and continue checking if it is a pdf galley */
if ($paymentManager->onlyPdfEnabled()) {
$galleyDAO =& DAORegistry::getDAO('ArticleGalleyDAO');
$galley =& $galleyDAO->getGalley($galleyId, $articleId);
if ($galley && !$galley->isPdfGalley()) {
return array($journal, $issue, $publishedArticle);
}
}
if (!Validation::isLoggedIn()) {
Validation::redirectLogin("payment.loginRequired.forArticle");
}
$user =& Request::getUser();
$userId = $user->getUserId();
/* if the article has been paid for then forget about everything else
* and just let them access the article */
$completedPaymentDAO =& DAORegistry::getDAO('OJSCompletedPaymentDAO');
if ($completedPaymentDAO->hasPaidPerViewArticle($userId, $articleId) || !is_null($user->getDateEndMembership()) && strtotime($user->getDateEndMembership()) > time()) {
return array($journal, $issue, $publishedArticle);
} else {
$queuedPayment =& $paymentManager->createQueuedPayment($journalId, PAYMENT_TYPE_PURCHASE_ARTICLE, $user->getUserId(), $articleId, $journal->getSetting('purchaseArticleFee'));
$queuedPaymentId = $paymentManager->queuePayment($queuedPayment);
$templateMgr =& TemplateManager::getManager();
$paymentManager->displayPaymentForm($queuedPaymentId, $queuedPayment);
exit;
}
}
if (!isset($galleyId) || $galleyId) {
if (!Validation::isLoggedIn()) {
Validation::redirectLogin("reader.subscriptionRequiredLoginText");
}
Request::redirect(null, 'about', 'subscriptions');
}
}
}
} else {
Request::redirect(null, 'index');
}
return array($journal, $issue, $publishedArticle);
}
/**
* Display the table of contents
*/
function issueToc($args)
{
$issueId = isset($args[0]) ? $args[0] : 0;
$issue = IssueManagementHandler::validate($issueId, true);
IssueManagementHandler::setupTemplate(EDITOR_SECTION_ISSUES);
$templateMgr =& TemplateManager::getManager();
$journal =& Request::getJournal();
$journalId = $journal->getJournalId();
$journalSettingsDao =& DAORegistry::getDAO('JournalSettingsDAO');
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$enablePublicArticleId = $journalSettingsDao->getSetting($journalId, 'enablePublicArticleId');
$templateMgr->assign('enablePublicArticleId', $enablePublicArticleId);
$enableSubscriptions = $journalSettingsDao->getSetting($journalId, 'enableSubscriptions');
$templateMgr->assign('enableSubscriptions', $enableSubscriptions);
$enablePageNumber = $journalSettingsDao->getSetting($journalId, 'enablePageNumber');
$templateMgr->assign('enablePageNumber', $enablePageNumber);
$templateMgr->assign('customSectionOrderingExists', $customSectionOrderingExists = $sectionDao->customSectionOrderingExists($issueId));
$templateMgr->assign('issueId', $issueId);
$templateMgr->assign_by_ref('issue', $issue);
$templateMgr->assign('unpublished', !$issue->getPublished());
$templateMgr->assign('issueAccess', $issue->getAccessStatus());
// get issue sections and articles
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticles = $publishedArticleDao->getPublishedArticles($issueId);
$layoutAssignmentDao =& DAORegistry::getDAO('LayoutAssignmentDAO');
$proofedArticleIds = $layoutAssignmentDao->getProofedArticlesByIssueId($issueId);
$templateMgr->assign('proofedArticleIds', $proofedArticleIds);
$currSection = 0;
$counter = 0;
$sections = array();
$sectionCount = 0;
$sectionDao =& DAORegistry::getDAO('SectionDAO');
foreach ($publishedArticles as $article) {
$sectionId = $article->getSectionId();
if ($currSection != $sectionId) {
$lastSectionId = $currSection;
$sectionCount++;
if ($lastSectionId !== 0) {
$sections[$lastSectionId][5] = $customSectionOrderingExists ? $sectionDao->getCustomSectionOrder($issueId, $sectionId) : $sectionCount;
}
// Store next custom order
$currSection = $sectionId;
$counter++;
$sections[$sectionId] = array($sectionId, $article->getSectionTitle(), array($article), $counter, $customSectionOrderingExists ? $sectionDao->getCustomSectionOrder($issueId, $lastSectionId) : $sectionCount - 1, null);
} else {
$sections[$article->getSectionId()][2][] = $article;
}
}
$templateMgr->assign_by_ref('sections', $sections);
$accessOptions[ISSUE_DEFAULT] = Locale::Translate('editor.issues.default');
$accessOptions[OPEN_ACCESS] = Locale::Translate('editor.issues.open');
$templateMgr->assign('accessOptions', $accessOptions);
import('issue.IssueAction');
$templateMgr->assign('issueOptions', IssueAction::getIssueOptions());
$templateMgr->assign('helpTopicId', 'publishing.tableOfContents');
$templateMgr->display('editor/issues/issueToc.tpl');
}
/**
* Given an issue, set up the template with all the required variables for
* issues/view.tpl to function properly.
* @param $issue object The issue to display
* @param $showToc boolean iff false and a custom cover page exists,
* the cover page will be displayed. Otherwise table of contents
* will be displayed.
*/
function setupIssueTemplate(&$issue, $showToc = false)
{
$journal =& Request::getJournal();
$journalId = $journal->getId();
$templateMgr =& TemplateManager::getManager();
if (isset($issue) && ($issue->getPublished() || Validation::isEditor($journalId) || Validation::isLayoutEditor($journalId) || Validation::isProofreader($journalId)) && $issue->getJournalId() == $journalId) {
$issueHeadingTitle = $issue->getIssueIdentification(false, true);
$issueCrumbTitle = $issue->getIssueIdentification(false, true);
$locale = Locale::getLocale();
import('classes.file.PublicFileManager');
$publicFileManager = new PublicFileManager();
$coverPagePath = Request::getBaseUrl() . '/';
$coverPagePath .= $publicFileManager->getJournalFilesPath($journalId) . '/';
$templateMgr->assign('coverPagePath', $coverPagePath);
$templateMgr->assign('locale', $locale);
if ($issue->getFileName($locale) && $issue->getShowCoverPage($locale) && !$issue->getHideCoverPageCover($locale)) {
//%LP% show thumbnail version rather than full-size front cover
$filename = $issue->getThumbFileName($issue->getFileName($locale));
$templateMgr->assign('fileName', $filename);
$templateMgr->assign('coverPageAltText', $issue->getCoverPageAltText($locale));
$templateMgr->assign('originalFileName', $issue->getOriginalFileName($locale));
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticles =& $publishedArticleDao->getPublishedArticlesInSections($issue->getId(), true);
$publicFileManager = new PublicFileManager();
$templateMgr->assign('publishedArticles', $publishedArticles);
}
$templateMgr->assign('showToc', $showToc);
$templateMgr->assign('issueId', $issue->getBestIssueId());
$templateMgr->assign('issue', $issue);
// Subscription Access
import('classes.issue.IssueAction');
$subscriptionRequired = IssueAction::subscriptionRequired($issue);
$subscribedUser = IssueAction::subscribedUser($journal);
$subscribedDomain = IssueAction::subscribedDomain($journal);
$subscriptionExpiryPartial = $journal->getSetting('subscriptionExpiryPartial');
if ($showToc && $subscriptionRequired && !$subscribedUser && !$subscribedDomain && $subscriptionExpiryPartial) {
$templateMgr->assign('subscriptionExpiryPartial', true);
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticlesTemp =& $publishedArticleDao->getPublishedArticles($issue->getId());
$articleExpiryPartial = array();
foreach ($publishedArticlesTemp as $publishedArticle) {
$partial = IssueAction::subscribedUser($journal, $issue->getId(), $publishedArticle->getId());
if (!$partial) {
IssueAction::subscribedDomain($journal, $issue->getId(), $publishedArticle->getId());
}
$articleExpiryPartial[$publishedArticle->getId()] = $partial;
}
$templateMgr->assign_by_ref('articleExpiryPartial', $articleExpiryPartial);
}
$templateMgr->assign('subscriptionRequired', $subscriptionRequired);
$templateMgr->assign('subscribedUser', $subscribedUser);
$templateMgr->assign('subscribedDomain', $subscribedDomain);
$templateMgr->assign('showGalleyLinks', $journal->getSetting('showGalleyLinks'));
import('classes.payment.ojs.OJSPaymentManager');
$paymentManager =& OJSPaymentManager::getManager();
if ($paymentManager->onlyPdfEnabled()) {
$templateMgr->assign('restrictOnlyPdf', true);
}
if ($paymentManager->purchaseArticleEnabled()) {
$templateMgr->assign('purchaseArticleEnabled', true);
}
} else {
$issueCrumbTitle = Locale::translate('archive.issueUnavailable');
$issueHeadingTitle = Locale::translate('archive.issueUnavailable');
}
if ($styleFileName = $issue->getStyleFileName()) {
import('classes.file.PublicFileManager');
$publicFileManager = new PublicFileManager();
$templateMgr->addStyleSheet(Request::getBaseUrl() . '/' . $publicFileManager->getJournalFilesPath($journalId) . '/' . $styleFileName);
}
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$articleFileDao =& DAORegistry::getDAO('ArticleFileDAO');
//%CBP% get repository object information for download links
$CBPPlatformDao =& DAORegistry::getDAO('CBPPlatformDAO');
$issueObject = $CBPPlatformDao->getFedoraIssueObjectInformation($issue->getIssueId());
$objectPid = $issueObject['fedora_namespace'] . ":" . $issueObject['fedora_pid'];
$objectDsid = $issueObject['fedora_dsid'];
$templateMgr->assign_by_ref('repositoryObjectPid', $objectPid);
$templateMgr->assign_by_ref('repositoryObjectDsid', $objectDsid);
$locale = Config::getVar('i18n', 'locale');
//%LP% show associated artefacts (supplementary files) related to the submission
foreach ($publishedArticles as $section) {
foreach ($section['articles'] as $article) {
$supplementaryFilesTemp[] = $article->getSuppFiles();
}
}
foreach ($supplementaryFilesTemp as $supplementaryFile) {
if ($supplementaryFile[0]) {
$suppFile = $supplementaryFile[0];
$article = $articleDao->getArticle($suppFile->getArticleId());
$title = $suppFile->getTitle();
if (stristr($title['en_US'], "Author Biography") == false) {
// don't list author biographies
$supplementaryFiles[] = array('title' => $title['en_US'], 'articleTitle' => $article->getArticleTitle(), 'articleId' => $article->getArticleId(), 'fileId' => $suppFile->getFileId());
}
}
}
$templateMgr->assign_by_ref('supplementaryFiles', $supplementaryFiles);
$atomistic = $templateMgr->_tpl_vars;
$atomistic = $atomistic['atomistic'];
$templateMgr->assign_by_ref('atomistic', $atomistic);
//%CBP% show issue/book ISBN
$isbn = $CBPPlatformDao->getIssueISBN($issue->getIssueId());
$templateMgr->assign_by_ref('isbn', $isbn);
$templateMgr->assign('pageCrumbTitleTranslated', $issueCrumbTitle);
$templateMgr->assign('issueHeadingTitle', $issueHeadingTitle);
}
/**
* Given an issue, set up the template with all the required variables for
* issues/view.tpl to function properly (i.e. current issue and view issue).
* @param $issue object The issue to display
* @param $showToc boolean iff false and a custom cover page exists,
* the cover page will be displayed. Otherwise table of contents
* will be displayed.
*/
function _setupIssueTemplate($request, $issue, $showToc = false)
{
$journal =& $request->getJournal();
$journalId = $journal->getId();
$templateMgr =& TemplateManager::getManager();
if (IssueHandler::_isVisibleIssue($issue, $journalId)) {
$issueHeadingTitle = $issue->getIssueIdentification(false, true);
$issueCrumbTitle = $issue->getIssueIdentification(false, true);
$locale = AppLocale::getLocale();
import('classes.file.PublicFileManager');
$publicFileManager = new PublicFileManager();
$coverPagePath = $request->getBaseUrl() . '/';
$coverPagePath .= $publicFileManager->getJournalFilesPath($journalId) . '/';
$templateMgr->assign('coverPagePath', $coverPagePath);
$templateMgr->assign('locale', $locale);
$coverLocale = $issue->getFileName($locale) ? $locale : $journal->getPrimaryLocale();
if (!$showToc && $issue->getFileName($coverLocale) && $issue->getShowCoverPage($coverLocale) && !$issue->getHideCoverPageCover($coverLocale)) {
$templateMgr->assign('fileName', $issue->getFileName($coverLocale));
$templateMgr->assign('width', $issue->getWidth($coverLocale));
$templateMgr->assign('height', $issue->getHeight($coverLocale));
$templateMgr->assign('coverPageAltText', $issue->getCoverPageAltText($coverLocale));
$templateMgr->assign('originalFileName', $issue->getOriginalFileName($coverLocale));
$showToc = false;
} else {
// Issue galleys
$issueGalleyDao =& DAORegistry::getDAO('IssueGalleyDAO');
$issueGalleys =& $issueGalleyDao->getGalleysByIssue($issue->getId());
$templateMgr->assign_by_ref('issueGalleys', $issueGalleys);
// Published articles
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticles =& $publishedArticleDao->getPublishedArticlesInSections($issue->getId(), true);
$publicFileManager = new PublicFileManager();
$templateMgr->assign_by_ref('publishedArticles', $publishedArticles);
$showToc = true;
}
$templateMgr->assign('showToc', $showToc);
$templateMgr->assign_by_ref('issue', $issue);
// Subscription Access
import('classes.issue.IssueAction');
$subscriptionRequired = IssueAction::subscriptionRequired($issue);
$subscribedUser = IssueAction::subscribedUser($journal);
$subscribedDomain = IssueAction::subscribedDomain($journal);
$subscriptionExpiryPartial = $journal->getSetting('subscriptionExpiryPartial');
if ($showToc && $subscriptionRequired && !$subscribedUser && !$subscribedDomain && $subscriptionExpiryPartial) {
$templateMgr->assign('subscriptionExpiryPartial', true);
// Partial subscription expiry for issue
$partial = IssueAction::subscribedUser($journal, $issue->getId());
if (!$partial) {
IssueAction::subscribedDomain($journal, $issue->getId());
}
$templateMgr->assign('issueExpiryPartial', $partial);
// Partial subscription expiry for articles
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticlesTemp =& $publishedArticleDao->getPublishedArticles($issue->getId());
$articleExpiryPartial = array();
foreach ($publishedArticlesTemp as $publishedArticle) {
$partial = IssueAction::subscribedUser($journal, $issue->getId(), $publishedArticle->getId());
if (!$partial) {
IssueAction::subscribedDomain($journal, $issue->getId(), $publishedArticle->getId());
}
$articleExpiryPartial[$publishedArticle->getId()] = $partial;
}
$templateMgr->assign_by_ref('articleExpiryPartial', $articleExpiryPartial);
}
$templateMgr->assign('subscriptionRequired', $subscriptionRequired);
$templateMgr->assign('subscribedUser', $subscribedUser);
$templateMgr->assign('subscribedDomain', $subscribedDomain);
$templateMgr->assign('showGalleyLinks', $journal->getSetting('showGalleyLinks'));
import('classes.payment.ojs.OJSPaymentManager');
$paymentManager = new OJSPaymentManager($request);
if ($paymentManager->onlyPdfEnabled()) {
$templateMgr->assign('restrictOnlyPdf', true);
}
if ($paymentManager->purchaseArticleEnabled()) {
$templateMgr->assign('purchaseArticleEnabled', true);
}
} else {
$issueCrumbTitle = __('archive.issueUnavailable');
$issueHeadingTitle = __('archive.issueUnavailable');
}
if ($issue && ($styleFileName = $issue->getStyleFileName())) {
import('classes.file.PublicFileManager');
$publicFileManager = new PublicFileManager();
$templateMgr->addStyleSheet($request->getBaseUrl() . '/' . $publicFileManager->getJournalFilesPath($journalId) . '/' . $styleFileName);
}
$templateMgr->assign('pageCrumbTitleTranslated', $issueCrumbTitle);
$templateMgr->assign('issueHeadingTitle', $issueHeadingTitle);
}
/**
* Determines whether a user can view this article galley or not.
* @param $request Request
* @param $articleId string
* @param $galleyId int or string
*/
function userCanViewGalley($request, $articleId, $galleyId = null)
{
import('classes.issue.IssueAction');
$issueAction = new IssueAction();
$journal = $request->getJournal();
$publishedArticle = $this->article;
$issue = $this->issue;
$journalId = $journal->getId();
$user = $request->getUser();
$userId = $user ? $user->getId() : 0;
// If this is an editorial user who can view unpublished/unscheduled
// articles, bypass further validation. Likewise for its author.
if ($publishedArticle && $issueAction->allowedPrePublicationAccess($journal, $publishedArticle)) {
return true;
}
// Make sure the reader has rights to view the article/issue.
if ($issue && $issue->getPublished() && $publishedArticle->getStatus() == STATUS_PUBLISHED) {
$subscriptionRequired = $issueAction->subscriptionRequired($issue);
$isSubscribedDomain = $issueAction->subscribedDomain($journal, $issue->getId(), $publishedArticle->getId());
// Check if login is required for viewing.
if (!$isSubscribedDomain && !Validation::isLoggedIn() && $journal->getSetting('restrictArticleAccess') && isset($galleyId) && $galleyId) {
Validation::redirectLogin();
}
// bypass all validation if subscription based on domain or ip is valid
// or if the user is just requesting the abstract
if (!$isSubscribedDomain && $subscriptionRequired && (isset($galleyId) && $galleyId)) {
// Subscription Access
$subscribedUser = $issueAction->subscribedUser($journal, $issue->getId(), $publishedArticle->getId());
import('classes.payment.ojs.OJSPaymentManager');
$paymentManager = new OJSPaymentManager($request);
$purchasedIssue = false;
if (!$subscribedUser && $paymentManager->purchaseIssueEnabled()) {
$completedPaymentDao = DAORegistry::getDAO('OJSCompletedPaymentDAO');
$purchasedIssue = $completedPaymentDao->hasPaidPurchaseIssue($userId, $issue->getId());
}
if (!(!$subscriptionRequired || $publishedArticle->getAccessStatus() == ARTICLE_ACCESS_OPEN || $subscribedUser || $purchasedIssue)) {
if ($paymentManager->purchaseArticleEnabled() || $paymentManager->membershipEnabled()) {
/* if only pdf files are being restricted, then approve all non-pdf galleys
* and continue checking if it is a pdf galley */
if ($paymentManager->onlyPdfEnabled()) {
if ($this->galley && !$this->galley->isPdfGalley()) {
$this->issue = $issue;
$this->article = $publishedArticle;
return true;
}
}
if (!Validation::isLoggedIn()) {
Validation::redirectLogin("payment.loginRequired.forArticle");
}
/* if the article has been paid for then forget about everything else
* and just let them access the article */
$completedPaymentDao = DAORegistry::getDAO('OJSCompletedPaymentDAO');
$dateEndMembership = $user->getSetting('dateEndMembership', 0);
if ($completedPaymentDao->hasPaidPurchaseArticle($userId, $publishedArticle->getId()) || !is_null($dateEndMembership) && $dateEndMembership > time()) {
$this->issue = $issue;
$this->article = $publishedArticle;
return true;
} else {
$queuedPayment = $paymentManager->createQueuedPayment($journalId, PAYMENT_TYPE_PURCHASE_ARTICLE, $user->getId(), $publishedArticle->getId(), $journal->getSetting('purchaseArticleFee'));
$queuedPaymentId = $paymentManager->queuePayment($queuedPayment);
$paymentManager->displayPaymentForm($queuedPaymentId, $queuedPayment);
exit;
}
}
if (!isset($galleyId) || $galleyId) {
if (!Validation::isLoggedIn()) {
Validation::redirectLogin('reader.subscriptionRequiredLoginText');
}
$request->redirect(null, 'about', 'subscriptions');
}
}
}
} else {
$request->redirect(null, 'search');
}
return true;
}
/**
* See implementation of retrieveResults for a description of this
* function.
* Note that this function is also called externally to fetch
* results for the title index, and possibly elsewhere.
*/
function &formatResults(&$results)
{
$articleDao =& DAORegistry::getDAO('ArticleDAO');
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$issueDao =& DAORegistry::getDAO('IssueDAO');
$journalDao =& DAORegistry::getDAO('JournalDAO');
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$publishedArticleCache = array();
$articleCache = array();
$issueCache = array();
$issueAvailabilityCache = array();
$journalCache = array();
$sectionCache = array();
$returner = array();
foreach ($results as $articleId) {
// Get the article, storing in cache if necessary.
if (!isset($articleCache[$articleId])) {
$publishedArticleCache[$articleId] =& $publishedArticleDao->getPublishedArticleByArticleId($articleId);
$articleCache[$articleId] =& $articleDao->getArticle($articleId);
}
unset($article);
$article =& $articleCache[$articleId];
$publishedArticle =& $publishedArticleCache[$articleId];
$sectionId = $article->getSectionId();
if (!isset($sectionCache[$sectionId])) {
$sectionCache[$sectionId] =& $sectionDao->getSection($sectionId);
}
if ($publishedArticle && $article) {
// Get the journal, storing in cache if necessary.
$journalId = $article->getJournalId();
if (!isset($journalCache[$journalId])) {
$journalCache[$journalId] = $journalDao->getJournal($journalId);
}
// Get the issue, storing in cache if necessary.
$issueId = $publishedArticle->getIssueId();
if (!isset($issueCache[$issueId])) {
unset($issue);
$issue =& $issueDao->getIssueById($issueId);
$issueCache[$issueId] =& $issue;
import('issue.IssueAction');
$issueAvailabilityCache[$issueId] = !IssueAction::subscriptionRequired($issue) || IssueAction::subscribedUser($journalCache[$journalId], $issueId, $articleId) || IssueAction::subscribedDomain($journalCache[$journalId], $issueId, $articleId);
}
// Store the retrieved objects in the result array.
$returner[] = array('article' => &$article, 'publishedArticle' => &$publishedArticleCache[$articleId], 'issue' => &$issueCache[$issueId], 'journal' => &$journalCache[$journalId], 'issueAvailable' => $issueAvailabilityCache[$issueId], 'section' => &$sectionCache[$sectionId]);
}
}
return $returner;
}
/**
* Display the table of contents
*/
function issueToc($args)
{
$issueId = isset($args[0]) ? $args[0] : 0;
$this->validate($issueId, true);
$issue =& $this->issue;
$this->setupTemplate(EDITOR_SECTION_ISSUES);
$templateMgr =& TemplateManager::getManager();
$journal =& Request::getJournal();
$journalId = $journal->getId();
$journalSettingsDao =& DAORegistry::getDAO('JournalSettingsDAO');
$sectionDao =& DAORegistry::getDAO('SectionDAO');
$enablePublicArticleId = $journalSettingsDao->getSetting($journalId, 'enablePublicArticleId');
$templateMgr->assign('enablePublicArticleId', $enablePublicArticleId);
$enablePageNumber = $journalSettingsDao->getSetting($journalId, 'enablePageNumber');
$templateMgr->assign('enablePageNumber', $enablePageNumber);
$templateMgr->assign('customSectionOrderingExists', $customSectionOrderingExists = $sectionDao->customSectionOrderingExists($issueId));
$templateMgr->assign('issueId', $issueId);
$templateMgr->assign_by_ref('issue', $issue);
$templateMgr->assign('unpublished', !$issue->getPublished());
$templateMgr->assign('issueAccess', $issue->getAccessStatus());
//%CBP% get CBP dao for required sections
$CBPPlatformDao =& DAORegistry::getDAO('CBPPlatformDAO');
$requiredSections = $CBPPlatformDao->getRequiredSections($journalId);
foreach ($requiredSections as $requiredSection) {
$requiredSectionsArr[$requiredSection['title']] = 1;
if ($requiredSection['delegated'] == "editor") {
$requiredSectionsDisplay[$requiredSection['title']]['title'] = $requiredSection['title'];
$requiredSectionsDisplay[$requiredSection['title']]['policy'] = $requiredSection['policy'];
}
}
$templateMgr->assign_by_ref('requiredSections', $requiredSectionsArr);
$templateMgr->assign_by_ref('requiredSectionsDisplay', $requiredSectionsDisplay);
// get issue sections and articles
$publishedArticleDao =& DAORegistry::getDAO('PublishedArticleDAO');
$publishedArticles = $publishedArticleDao->getPublishedArticles($issueId);
$layoutEditorSubmissionDao =& DAORegistry::getDAO('LayoutEditorSubmissionDAO');
$proofedArticleIds = $layoutEditorSubmissionDao->getProofedArticlesByIssueId($issueId);
$templateMgr->assign('proofedArticleIds', $proofedArticleIds);
$currSection = 0;
$counter = 0;
$sections = array();
$sectionCount = 0;
$sectionDao =& DAORegistry::getDAO('SectionDAO');
foreach ($publishedArticles as $article) {
$sectionId = $article->getSectionId();
if ($currSection != $sectionId) {
$lastSectionId = $currSection;
$sectionCount++;
if ($lastSectionId !== 0) {
$sections[$lastSectionId][5] = $customSectionOrderingExists ? $sectionDao->getCustomSectionOrder($issueId, $sectionId) : $sectionCount;
}
// Store next custom order
$currSection = $sectionId;
$counter++;
$sections[$sectionId] = array($sectionId, $article->getSectionTitle(), array($article), $counter, $customSectionOrderingExists ? $sectionDao->getCustomSectionOrder($issueId, $lastSectionId) : $sectionCount - 1, null);
} else {
$sections[$article->getSectionId()][2][] = $article;
}
}
$templateMgr->assign_by_ref('sections', $sections);
$templateMgr->assign('accessOptions', array(ARTICLE_ACCESS_ISSUE_DEFAULT => Locale::Translate('editor.issues.default'), ARTICLE_ACCESS_OPEN => Locale::Translate('editor.issues.open')));
//%CBP% get comments for issue by reviewers and EIC
$templateMgr->assign('user', DAORegistry::getDAO('UserDAO'));
//$templateMgr->assign('issueComments', $CBPPlatformDao->getReviewerIssueComments($issueId));
import('classes.issue.IssueAction');
$templateMgr->assign('issueOptions', IssueAction::getIssueOptions());
$templateMgr->assign('helpTopicId', 'publishing.tableOfContents');
$templateMgr->addJavaScript('lib/pkp/js/jquery.tablednd_0_5.js');
$templateMgr->addJavaScript('lib/pkp/js/tablednd.js');
$templateMgr->display('editor/issues/issueToc.tpl');
}
