/**
* @see SampleInterface::clone_sample()
* @param integer $source_sample_id
* @param string $name
* @param integer $manufacturer_id
* @param integer $location_id
* @param string $desc
* @param integer $language_id
* @param string $date_of_expiry
* @param integer $expiry_warning
* @param array $value_array
* @param array $item_array
* @return integer
* @throws SampleCloneIDMissingException
* @throws SampleCloneCreateException
* @throws SampleCloneCreateFolderException
* @throws SampleCloneCreateSubFolderException
* @throws SampleCloneCreateAsItemException
* @throws SampleCloneCreateLocationException
* @throws SampleCloneCreateFailedException
* @throws SampleCloneUserException
* @throws SampleCloneOrganisationUnitException
* @throws SampleCloneLocationException
* @throws SampleCloneValueException
* @throws SampleCloneFileException
* @throws SampleCloneParentException
* @throws SampleCloneItemException
*/
public function clone_sample($source_sample_id, $name, $manufacturer_id, $location_id, $desc, $language_id, $date_of_expiry, $expiry_warning, $value_array, $item_array)
{
global $user, $transaction;
if (is_numeric($source_sample_id) and $name) {
$source_sample = new Sample($source_sample_id);
$source_sample_security = new SampleSecurity($source_sample_id);
$source_sample_folder_id = SampleFolder::get_folder_by_sample_id($source_sample_id);
$transaction_id = $transaction->begin();
try {
if (($sample_id = $this->sample->create($name, $user->get_user_id(), $source_sample->get_template_id(), $manufacturer_id, $desc, $language_id, $date_of_expiry, $expiry_warning)) == null) {
throw new SampleCloneCreateFailedException();
}
if ($desc) {
$this->sample->set_comment_text_search_vector($desc, "english");
}
$sub_folder_name_array = $this->create_sample_folder($sample_id, $source_sample->get_template_id());
$this->create_sample_item($sample_id);
$sample_security = new SampleSecurity($sample_id);
$source_sample_user_list = $source_sample_security->list_users();
if (is_array($source_sample_user_list) and count($source_sample_user_list) >= 1) {
foreach ($source_sample_user_list as $key => $value) {
if ($sample_security->create_user($value, true, true) == null) {
throw new SampleCloneUserException();
}
}
}
$source_sample_organisation_list = $source_sample_security->list_organisation_units();
if (is_array($source_sample_organisation_list) and count($source_sample_organisation_list) >= 1) {
foreach ($source_sample_organisation_list as $key => $value) {
if ($sample_security->create_organisation_unit($value) == null) {
throw new SampleCloneOrganisationUnitException();
}
}
}
// Locations
$source_sample_location_array = SampleHasLocation_Access::list_entries_by_sample_id($source_sample_id);
$end_sample_has_location_access = new SampleHasLocation_Access(end($source_sample_location_array));
if (is_array($source_sample_location_array) and count($source_sample_location_array) >= 1) {
if ($location_id != $end_sample_has_location_access->get_location_id()) {
$add_new_location = true;
} else {
$add_new_location = false;
}
foreach ($source_sample_location_array as $key => $value) {
$current_sample_has_location_access = new SampleHasLocation_Access($value);
$sample_has_location_access = new SampleHasLocation_Access(null);
if ($sample_has_location_access->create($sample_id, $current_sample_has_location_access->get_location_id(), $user->get_user_id()) == null) {
throw new SampleCloneLocationException();
}
}
} else {
$add_new_location = true;
}
if (is_numeric($location_id) and $add_new_location == true and $location_id > 0) {
// Create First Location
$sample_has_location_access = new SampleHasLocation_Access(null);
if ($sample_has_location_access->create($sample_id, $location_id, $user->get_user_id()) == null) {
throw new SampleCloneCreateLocationException("Could not create location");
}
}
if (is_array($value_array) and count($item_array) >= 1) {
$value_item_array = array();
$value_data_array = array();
foreach ($value_array as $key => $value) {
$key = str_replace("value-", "", $key);
$key_array = explode("-", $key, 2);
if ($key_array[0] == "item") {
$value_item_array[$key_array[1]] = $value;
} elseif (is_numeric($key_array[0])) {
$value_data_array[$key_array[0]][$key_array[1]] = $value;
}
}
if (is_array($value_item_array) and count($value_item_array) >= 1) {
foreach ($value_item_array as $key => $value) {
$gid = SampleItem::get_gid_by_item_id_and_sample_id($value, $source_sample_id);
$data_entity_id = DataEntity::get_entry_by_item_id($value);
$value_id = Value::get_value_id_by_data_entity_id($data_entity_id);
if (is_numeric($value_id)) {
$value_obj = Value::get_instance($value_id);
$parent_folder_id = $value_obj->get_parent_folder_id();
$value_type_id = $value_obj->get_type_id();
if ($parent_folder_id == $source_sample_folder_id) {
$new_folder_id = $this->sample_folder_id;
} else {
$folder_name = Folder::get_name_by_id($parent_folder_id);
$new_folder_id = array_search(trim(strtolower($folder_name)), $sub_folder_name_array);
}
if (is_numeric($new_folder_id) and is_numeric($value_type_id)) {
$new_value_obj = Value::get_instance(null);
$new_value_obj->create($new_folder_id, $user->get_user_id(), $value_type_id, $value_data_array[$key]);
$new_value_item_id = $new_value_obj->get_item_id();
$sample_item = new SampleItem($sample_id);
$sample_item->set_gid($gid);
if ($sample_item->set_item_id($new_value_item_id) == false) {
throw new SampleCloneValueException();
}
if ($sample_item->link_item() == false) {
throw new SampleCloneValueException();
}
}
}
}
}
}
if (is_array($item_array) and count($item_array) >= 1) {
$item_type_array = array();
$item_data_array = array();
foreach ($item_array as $key => $value) {
if ($value[1] == "1") {
$item_explode_array = explode("-", $value[0], 2);
if (!in_array($item_explode_array[0], $item_type_array)) {
array_push($item_type_array, $item_explode_array[0]);
}
if (!is_array($item_data_array[$item_explode_array[0]])) {
$item_data_array[$item_explode_array[0]] = array();
}
array_push($item_data_array[$item_explode_array[0]], $item_explode_array[1]);
}
}
if (is_array($item_type_array) and count($item_type_array) >= 1) {
foreach ($item_type_array as $key => $value) {
if ($value == "parent") {
foreach ($item_data_array[$value] as $data_key => $data_value) {
$parent_item_explode_array = explode("-", $data_value, 2);
if ($parent_item_explode_array[0] and $parent_item_explode_array[1]) {
$item_add_holder_event = new ItemAddHolderEvent($parent_item_explode_array[1], $parent_item_explode_array[0], $this->item_id);
$event_handler = new EventHandler($item_add_holder_event);
if ($event_handler->get_success() == false) {
throw new SampleCloneParentException();
}
}
}
} elseif ($value == "file") {
if (is_array($item_data_array[$value]) and count($item_data_array[$value]) >= 1) {
foreach ($item_data_array[$value] as $data_key => $data_value) {
$gid = SampleItem::get_gid_by_item_id_and_sample_id($data_value, $source_sample_id);
$data_entity_id = DataEntity::get_entry_by_item_id($data_value);
$file_id = File::get_file_id_by_data_entity_id($data_entity_id);
if ($file_id) {
$file_obj = File::get_instance($file_id);
$parent_folder_id = $file_obj->get_parent_folder_id();
if ($parent_folder_id == $source_sample_folder_id) {
$new_folder_id = $this->sample_folder_id;
} else {
$folder_name = Folder::get_name_by_id($parent_folder_id);
$new_folder_id = array_search(trim(strtolower($folder_name)), $sub_folder_name_array);
}
if (is_numeric($new_folder_id)) {
if ($file_obj->copy($new_folder_id) == false) {
throw new SampleCloneFileException();
}
$new_file_item_id = $file_obj->get_item_id();
$sample_item = new SampleItem($sample_id);
$sample_item->set_gid($gid);
if ($sample_item->set_item_id($new_file_item_id) == false) {
throw new SampleCloneFileException();
}
if ($sample_item->link_item() == false) {
throw new SampleCloneFileException();
}
}
}
}
}
} else {
if (is_array($item_data_array[$value]) and count($item_data_array[$value]) >= 1) {
$handling_class = Item::get_handling_class_by_type($value);
if ($handling_class) {
foreach ($item_data_array[$value] as $data_key => $data_value) {
$gid = SampleItem::get_gid_by_item_id_and_sample_id($data_value, $source_sample_id);
$new_item_id = $handling_class::clone_item($data_value);
if ($new_item_id) {
$sample_item = new SampleItem($sample_id);
$sample_item->set_gid($gid);
if ($sample_item->set_item_id($new_item_id) == false) {
throw new SampleCloneItemException();
}
if ($sample_item->link_item() == false) {
throw new SampleCloneItemException();
}
}
}
}
}
}
}
}
}
} catch (BaseException $e) {
if (is_object($this->sample_folder_object)) {
$this->sample_folder_object->delete(true, true);
}
if ($transaction_id != null) {
$transaction->rollback($transaction_id);
}
throw $e;
}
if ($transaction_id != null) {
$transaction->commit($transaction_id);
}
self::__construct($sample_id);
return $sample_id;
} else {
throw new SampleCloneIDMissingException();
}
}
/**
* @throws SampleIDMissingException
* @throws SampleSecurityAccessDeniedException
*/
public static function user_permission_add()
{
global $user;
if ($_GET['sample_id']) {
$sample_id = $_GET['sample_id'];
$sample = new Sample($sample_id);
$sample_security = new SampleSecurity($sample_id);
if ($sample->get_owner_id() == $user->get_user_id() or $user->is_admin() == true) {
if ($_GET['nextpage'] == 1) {
if (is_numeric($_POST['user'])) {
if ($sample_security->is_user($_POST['user']) == true) {
$page_1_passed = false;
$error = "This user was already added.";
} else {
$page_1_passed = true;
}
} else {
$page_1_passed = false;
$error = "You must select an user.";
}
} elseif ($_GET['nextpage'] > 1) {
$page_1_passed = true;
} else {
$page_1_passed = false;
$error = "";
}
if ($page_1_passed == false) {
$template = new HTMLTemplate("sample/int_admin/user_permission_add_page_1.html");
$paramquery = $_GET;
$paramquery['nextpage'] = "1";
$params = http_build_query($paramquery, '', '&');
$template->set_var("params", $params);
$template->set_var("error", $error);
$user_array = User::list_entries();
$result = array();
$counter = 0;
foreach ($user_array as $key => $value) {
$user = new User($value);
$result[$counter]['value'] = $value;
$result[$counter]['content'] = $user->get_username() . " (" . $user->get_full_name(false) . ")";
$counter++;
}
$template->set_var("option", $result);
$template->output();
} else {
if ($_GET['nextpage'] == 2) {
$page_2_passed = true;
} else {
$page_2_passed = false;
}
if ($page_2_passed == false) {
$template = new HTMLTemplate("sample/int_admin/user_permission_add_page_2.html");
$paramquery = $_GET;
$paramquery['nextpage'] = "2";
$params = http_build_query($paramquery, '', '&');
$template->set_var("params", $params);
$template->set_var("user", $_POST['user']);
$template->output();
} else {
$paramquery = $_GET;
unset($paramquery['nextpage']);
unset($paramquery['sure']);
$paramquery['nav'] = "sample";
$paramquery['run'] = "admin_permission_user";
$params = http_build_query($paramquery);
if ($_POST['read'] == "1") {
$read = true;
} else {
$read = false;
}
if ($_POST['write'] == "1") {
$write = true;
} else {
$write = false;
}
if ($sample_security->create_user($_POST['user'], $read, $write) != null) {
Common_IO::step_proceed($params, "Add Permission", "Operation Successful", null);
} else {
Common_IO::step_proceed($params, "Add Permission", "Operation Failed", null);
}
}
}
} else {
throw new SampleSecurityAccessDeniedException();
}
} else {
throw new SampleIDMissingException();
}
}