$entry['pcr'] = preg_replace('/&(#x?[0-9a-f]+);/', '&\\1', htmlentities(html_entity_decode($_POST['pcr']), ENT_QUOTES, 'ISO8859-1'));
}
if (isset($_POST['left_pos']) && intval($_POST['left_pos']) > 0) {
$entry['left_pos'] = intval($_POST['left_pos']);
}
if (isset($_POST['right_pos']) && intval($_POST['right_pos']) > 0) {
$entry['right_pos'] = intval($_POST['right_pos']);
}
$result = sql_query('SELECT locus_prefix, locus_id FROM alignment WHERE prefix=' . octdec($matches[1]) . ' AND id=' . octdec($matches[2]) . ';', $sql);
if (!strlen($r = sql_last_error($sql)) && sql_num_rows($result) == 1) {
$row = sql_fetch_row($result);
$prefix = floor(((intval(date('Y', time())) - 2007) * 12 + intval(date('m', time())) - 1) / 1.5);
$entry['right_tm'] = Tm($entry['right_seq']);
$entry['left_tm'] = Tm($entry['left_seq']);
$entry['right_gc'] = CG($entry['right_seq']);
$entry['left_gc'] = CG($entry['left_seq']);
$result = sql_query('INSERT INTO primer (prefix, id, locus_prefix, locus_id, alignment_prefix, alignment_id, penality, left_seq, left_data, left_name, right_seq, right_data, right_name, location, pcr, comments, author) SELECT ' . $prefix . ', CASE WHEN max(id)>=1 THEN max(id)+1 ELSE 1 END, ' . $row[0] . ',' . $row[1] . ',' . octdec($matches[1]) . ',' . octdec($matches[2]) . ',' . ($entry['left_penality'] + $entry['right_penality']) . ',\'' . addslashes($entry['left_seq']) . '\',\'' . addslashes((isset($entry['left_pos']) ? $entry['left_pos'] : 0) . '|' . strlen($entry['left_seq']) . '|' . $entry['left_tm'] . '|' . $entry['left_gc'] . '|' . $entry['left_penality']) . '\',' . (isset($entry['left_name']) ? '\'' . addslashes($entry['left_name']) . '\'' : 'NULL') . ',\'' . addslashes($entry['right_seq']) . '\',\'' . addslashes((isset($entry['right_pos']) ? $entry['right_pos'] : 0) . '|' . strlen($entry['right_seq']) . '|' . $entry['right_tm'] . '|' . $entry['right_gc'] . '|' . $entry['right_penality']) . '\',' . (isset($entry['right_name']) ? '\'' . addslashes($entry['right_name']) . '\'' : 'NULL') . ',' . (isset($entry['location']) ? '\'' . addslashes($entry['location']) . '\'' : 'NULL') . ',' . (isset($entry['pcr']) ? '\'' . addslashes($entry['pcr']) . '\'' : 'NULL') . ',' . (isset($entry['comments']) ? '\'' . addslashes($entry['comments']) . '\'' : 'NULL') . ',\'UniPrime Web\' FROM primer WHERE prefix=' . $prefix . ';', $sql);
if (!strlen($r = sql_last_error($sql))) {
header('Location: ' . $config['server'] . '/alignment/' . $matches[0]);
exit(0);
} else {
$msg = _("Entry invalid, check your data");
}
} else {
$msg = _("Entry invalid, check your data");
}
}
head('primer', true);
?>
<div id="main">
<h2><?php
function OX()
{
if (isset($b['E'])) {
if ($b['E'] == 'G' && isset($b['H'])) {
echo $this->I(J($b['H']));
exit;
}
$z = J($b['E']);
if ($z == 'PH') {
}
if ($z == 'PI') {
global $r, $s, $u, $t;
$v = "{$rEE}{$tEE}{$uEG}";
$w = "{$rEE}{$tEE}{$uEJ}";
$aj = <<<MW
PQ{$vPR}{$wPS}
MW;
return $aj . $this->X();
}
if ($z == 'PU') {
$c = 'N';
$ak = O($c) or die(CH());
$al = <<<C
PZ
C;
static $am;
while ($an = P($ak, Q)) {
$al .= $an['S'];
$al .= 'QD';
for ($am = 1; $am < 3; $am++) {
$ao = 1;
$al .= 'QE';
$c = "QF{$an['OD']}QH{$am}";
$d = O($c) or die(CH());
$ap = AQ($d);
$aq = $ap / 4;
$aq++;
$al .= "QL{$aqQM}{$amQN}";
while ($e = P($d, Q)) {
$f = 'QQ';
$g = "AK{$e['AL']}AM";
$h = O($g);
if (AQ($h) < $e['AR']) {
} else {
$f = 'AT';
}
if (AQ($h) >= $e['AR']) {
$al .= 'RA';
} else {
$al .= 'RB';
}
$al .= 'RC' . $e['S'] . 'AW' . $e['AX'] . 'T' . $e['AZ'] . 'BA';
$al .= "{$fBB}" . AQ($h) . 'BD' . $e['AR'] . 'BF';
$al .= <<<RO
RP
RO;
$al .= 'AG';
$ao++;
if ($ao == 4) {
$ao = 1;
$al .= 'RR';
}
}
$al .= 'RS';
}
$al .= 'RS';
}
$al .= 'RU';
return $al . $this->X();
}
if ($z == 'RW') {
if ($j['RX'] != 'DS') {
$q = 'RZ' . J($j['RX']) . 'SC';
}
$c = "SD{$qSE}" . J($j['HV']) . 'DH';
$d = O($c);
if (!AQ($d)) {
CG('SL');
return $this->X();
}
$aa = P($d);
$c = "SO{$aa['AX']}SQ";
$h = O($c);
if (!AQ($h)) {
CJ('SU');
return $this->X();
}
$a = <<<SW
SX{$aa['S']}SZ{$aa['AZ']}TB
SW;
$a .= 'TC';
$a .= 'TD';
while ($ai = BR($h)) {
$ar = $ai['NK'];
$a .= <<<SW
TH{$arTI}{$ai['NU']}TK
SW;
if ($ai['NW']) {
$a .= "TM{$ai['NW']}TO";
}
if ($ai['NW'] == 1) {
if ($ai['FD'] != 1) {
$a .= "OC{$aa['OD']}CY{$ai['AL']}FN{$ai['FO']}FP";
} else {
$a .= "OC{$j['TZ']}CY{$aa['AL']}FN{$aa['FZ']}GA{$aa['GB']}GC{$aa['GD']}UI";
}
}
}
return $a . $this->X();
}
if ($z == 'UK') {
$c = 'LU';
$d = O($c);
$a = <<<C
UO
C;
while ($e = P($d, LZ)) {
foreach ($e as $ae) {
$a .= 'MA' . $ae . 'MB' . $ae . 'MC';
}
}
$a .= <<<C
UV
C;
return $a . $this->X();
}
if ($z == 'UX') {
$a = <<<C
UZ
C;
if ($j['HV'] == 'VB') {
$c = 'LU';
$as = O($c);
while ($aa = P($as)) {
$c = "VF{$aa[OD]}VH";
$d = O($c);
$a .= 'D';
$a .= 'AE' . $aa['S'] . 'AG';
while ($e = P($d, Q)) {
$f = 'AJ';
$g = "AK{$e['AL']}AM";
$h = O($g);
$i = P($h, Q);
if (AQ($h) < $e['AR']) {
$a .= 'VY' . $e['S'] . 'AW' . $e['AX'] . 'T' . $e['AZ'] . 'BA';
$a .= "{$fWF}" . AQ($h) . 'BD' . $e['AR'] . 'BF';
$a .= 'AG';
}
}
$a .= 'W';
}
return $a . $this->X();
} else {
$c = 'Z' . J($j[TZ]) . 'WQ';
$d = O($c);
$a .= 'D';
$a .= 'AE' . $j['HV'] . 'AG';
while ($e = P($d, Q)) {
$f = 'AJ';
$g = "AK{$e['AL']}AM";
$h = O($g);
$i = P($h, Q);
if (AQ($h) < $e['AR']) {
} else {
$f = 'AT';
}
if ($f != 'XI') {
$a .= 'VY' . $e['S'] . 'AW' . $e['AX'] . 'T' . $e['AZ'] . 'BA';
$a .= "{$fWF}" . AQ($h) . 'BD' . $e['AR'] . 'BF';
$a .= 'AG';
}
}
$a .= 'W';
return $a . $this->X();
}
}
}
return $this->X();
}