/**
* @Route("/")
* @Route("/hello/{name}")
* @Template()
*/
public function indexAction($name = "guest")
{
$fasta_in = new FastAFile(new \SplFileObject("/tmp/dmel-all-chromosome-r5.47.fasta"));
$fasta_out = new FastAFile(new \SplFileObject("/tmp/test-output.fasta"));
foreach ($fasta_out->getSequences() as $sequence) {
$fasta_out->removeSequence($sequence);
}
foreach ($fasta_in->getSequences() as $sequence) {
$fasta_out->addSequence($sequence);
}
$fasta_out->save();
return array();
}
