public function testFindReplace()
{
// Upload variant data.
$this->driver->get(ROOT_URL . '/src/variants/upload?create&type=VCF');
$this->enterValue(WebDriverBy::name("variant_file"), ROOT_PATH . "../tests/test_data_files/ShortVCFfilev1.vcf");
$uploadButton = $this->driver->findElement(WebDriverBy::xpath("//input[@value='Upload VCF file']"));
$uploadButton->click();
// Go to variant overview
$this->driver->get(ROOT_URL . '/src/variants');
// Open find and replace for Reference col.
$this->openFRMenuForCol(6);
// Click cancel button.
sleep(1);
$cancelButton = $this->driver->findElement(WebDriverBy::id('FRCancel_VOG'));
$cancelButton->click();
// Check if cancel button is hidden together with FR options menu by javascript.
$this->waitUntil(WebDriverExpectedCondition::invisibilityOfElementLocated(WebDriverBy::id('FRCancel_VOG')));
// Open find and replace for Reference col.
$this->openFRMenuForCol(6);
$columnReference = $this->driver->findElement(WebDriverBy::id('viewlistFRColDisplay_VOG'));
$this->assertEquals($columnReference->getText(), 'Reference');
$this->enterValue(WebDriverBy::name('FRReplace_VOG'), 'newvalue');
$previewButton = $this->driver->findElement(WebDriverBy::id('FRPreview_VOG'));
$previewButton->click();
// Click on header to close tooltip.
$previewTooltip = $this->driver->findElement(WebDriverBy::xpath('//div[@class="ui-tooltip-content" and contains(., "Preview changes")]'));
$mainHeader = $this->driver->findElement(WebDriverBy::xpath('//h2[contains(., "LOVD")]'));
$mainHeader->click();
// Check if tooltip is closed.
$this->waitUntil(WebDriverExpectedCondition::stalenessOf($previewTooltip));
$this->assertContains($this->driver->findElement(WebDriverBy::xpath('//th[@data-fieldname="VariantOnGenome/Reference_FR"]'))->getText(), 'Reference (PREVIEW)');
$aNewValueElements = $this->driver->findElements(WebDriverBy::xpath('//td[text()="newvalue"]'));
$this->assertEquals(count($aNewValueElements), 25);
$this->enterValue(WebDriverBy::xpath('//input[@type="password"]'), 'test1234');
$submitButton = $this->driver->findElement(WebDriverBy::id('FRSubmit_VOG'));
$submitButton->click();
$this->chooseOkOnNextConfirmation();
// Wait for refresh of viewlist with string "newvalue" in 6th column (Reference).
$this->waitUntil(WebDriverExpectedCondition::presenceOfElementLocated(WebDriverBy::xpath('//table[@id="viewlistTable_VOG"]/tbody/tr/td[position()=6 and text()="newvalue"]')));
// Open find & replace menu for field "DNA change (genomic) (hg19)"
$this->openFRMenuForCol(5);
// Set search field to 'C' and preview.
$this->enterValue(WebDriverBy::name('FRSearch_VOG'), 'C');
$previewButton = $this->driver->findElement(WebDriverBy::id('FRPreview_VOG'));
$previewButton->click();
// Click on tooltip to close it
$previewTooltip = $this->driver->findElement(WebDriverBy::xpath('//div[@class="ui-tooltip-content" and text()="Preview changes (14 rows affected)"]'));
$previewTooltip->click();
// Filter on 'Variant ID' > 10 during preview.
$sSearchIDSelector = WebDriverBy::name('search_id_');
$this->enterValue($sSearchIDSelector, '>10');
$searchIDElement = $this->driver->findElement($sSearchIDSelector);
// Use json_decode to send enter key to browser.
$searchIDElement->sendKeys(json_decode('"\\uE007"'));
// Check that viewlist is refreshed. (id='0000000004' should be filtered)
$this->waitUntil(function ($driver) {
$vlTable = $driver->findElement(WebDriverBy::id('viewlistTable_VOG'));
// Avoid checking text exactly during refresh.
try {
$sTableText = $vlTable->getText();
} catch (StaleElementReferenceException $e) {
// try again next poll
return false;
}
return strpos($sTableText, '0000000004') === false;
});
// Submit find & replace
$this->enterValue(WebDriverBy::xpath('//input[@type="password"]'), 'test1234');
$submitButton = $this->driver->findElement(WebDriverBy::id('FRSubmit_VOG'));
$submitButton->click();
// Check that filter has effect (otherwise 14 records are modified).
$alertText = $this->driver->switchTo()->alert()->getText();
$this->assertContains('You are about to modify 9 records', $alertText);
$this->chooseOkOnNextConfirmation();
// Wait until viewlist is refreshed.
$this->waitUntil(WebDriverExpectedCondition::presenceOfElementLocated(WebDriverBy::xpath('//td[@valign="middle" and contains(., "Find & Replace applied to column")]')));
// Open find and replace for Reference col.
$this->openFRMenuForCol(6);
$matchBeginningRadio = $this->driver->findElement(WebDriverBy::xpath('//input[@name="FRMatchType_VOG" and @value="2"]'));
$matchBeginningRadio->click();
$this->enterValue(WebDriverBy::name('FRReplace_VOG'), 'prefix');
// Find empty string at beginning of field and insert prefix string.
$previewButton = $this->driver->findElement(WebDriverBy::id('FRPreview_VOG'));
$previewButton->click();
// Click on tooltip to close it
$previewTooltip = $this->driver->findElement(WebDriverBy::xpath('//div[@class="ui-tooltip-content" and text()="Preview changes (15 rows affected)"]'));
$previewTooltip->click();
$this->enterValue(WebDriverBy::xpath('//input[@type="password"]'), 'test1234');
$submitButton = $this->driver->findElement(WebDriverBy::id('FRSubmit_VOG'));
$submitButton->click();
$this->chooseOkOnNextConfirmation();
$this->waitUntil(WebDriverExpectedCondition::presenceOfElementLocated(WebDriverBy::xpath('//td[text()="prefixnewvalue"]')));
}
/**
* Waits up to $timeout seconds for the given element to become invisible.
* If element stays visible, a timeout exception is thrown.
*
* ``` php
* <?php
* $I->waitForElementNotVisible('#agree_button', 30); // secs
* ?>
* ```
*
* @param $element
* @param int $timeout seconds
* @throws \Exception
*/
public function waitForElementNotVisible($element, $timeout = 10)
{
$condition = WebDriverExpectedCondition::invisibilityOfElementLocated($this->getLocator($element));
$this->webDriver->wait($timeout)->until($condition);
}
/**
* Wait and validate an element to be invisible.
*
* @param $selector string The element's CSS selector.
*
* @throws \Exception
*
* @return $this
*/
public function notSee($selector)
{
$this->waitUntil(WebDriverExpectedCondition::invisibilityOfElementLocated(WebDriverBy::cssSelector($selector)));
return $this;
}
