Example #1
0
 /**
  * 
  * {@inheritDoc}
  * 
  * @see \Doctrine\Common\DataFixtures\FixtureInterface::load()
  * 
  * @param Doctrine\Common\Persistence\ObjectManager $manager
  * 
  */
 public function load(ObjectManager $manager)
 {
     $protein1 = new Protein();
     $protein1->setProteinAccession('ProteinAccessionTU1');
     $protein1->setProteinSeq('ProteinSeqTU1');
     $this->addReference('ProteinTU1', $protein1);
     $manager->persist($protein1);
     $protein2 = new Protein();
     $protein2->setProteinAccession('ProteinAccessionTU2');
     $protein2->setProteinSeq('ProteinSeqTU2');
     $this->addReference('ProteinTU2', $protein2);
     $manager->persist($protein2);
     $protein3 = new Protein();
     $protein3->setProteinAccession('ProteinAccessionTU3');
     $protein3->setProteinSeq('ProteinSeqTU3');
     $this->addReference('ProteinTU3', $protein3);
     $manager->persist($protein3);
     $protein4 = new Protein();
     $protein4->setProteinAccession('ProteinAccessionTU4');
     $protein4->setProteinSeq('ProteinSeqTU4');
     $this->addReference('ProteinTU4', $protein4);
     $manager->persist($protein4);
     $protein5 = new Protein();
     $protein5->setProteinAccession('ProteinAccessionTU5');
     $protein5->setProteinSeq('ProteinSeqTU5');
     $this->addReference('ProteinTU5', $protein5);
     $manager->persist($protein5);
     $protein6 = new Protein();
     $protein6->setProteinAccession('ProteinAccessionTU6');
     $protein6->setProteinSeq('ProteinSeqTU6');
     $this->addReference('ProteinTU6', $protein6);
     $manager->persist($protein6);
     $protein7 = new Protein();
     $protein7->setProteinAccession('ProteinAccessionTU7');
     $protein7->setProteinSeq('ProteinSeqTU7');
     $this->addReference('ProteinTU7', $protein7);
     $manager->persist($protein7);
     $protein8 = new Protein();
     $protein8->setProteinAccession('ProteinAccessionTU8');
     $protein8->setProteinSeq('ProteinSeqTU8');
     $this->addReference('ProteinTU8', $protein8);
     $manager->persist($protein8);
     $protein9 = new Protein();
     $protein9->setProteinAccession('ProteinAccessionTU9');
     $protein9->setProteinSeq('ProteinSeqTU9');
     $this->addReference('ProteinTU9', $protein9);
     $manager->persist($protein9);
     $protein10 = new Protein();
     $protein10->setProteinAccession('ProteinAccessionTU10');
     $protein10->setProteinSeq('ProteinSeqTU10');
     $this->addReference('ProteinTU10', $protein10);
     $manager->persist($protein10);
     $protein11 = new Protein();
     $protein11->setProteinAccession('ProteinAccessionTU11');
     $protein11->setProteinSeq('ProteinSeqTU11');
     $this->addReference('ProteinTU11', $protein11);
     $manager->persist($protein11);
     $protein12 = new Protein();
     $protein12->setProteinAccession('ProteinAccessionTU12');
     $protein12->setProteinSeq('ProteinSeqTU12');
     $this->addReference('ProteinTU12', $protein12);
     $manager->persist($protein12);
     $protein13 = new Protein();
     $protein13->setProteinAccession('ProteinAccessionTU13');
     $protein13->setProteinSeq('ProteinSeqTU13');
     $this->addReference('ProteinTU13', $protein13);
     $manager->persist($protein13);
     $protein14 = new Protein();
     $protein14->setProteinAccession('ProteinAccessionTU14');
     $protein14->setProteinSeq('ProteinSeqTU14');
     $this->addReference('ProteinTU14', $protein14);
     $manager->persist($protein14);
     $protein15 = new Protein();
     $protein15->setProteinAccession('ProteinAccessionTU15');
     $protein15->setProteinSeq('ProteinSeqTU15');
     $this->addReference('ProteinTU15', $protein15);
     $manager->persist($protein15);
     $manager->flush();
 }
Example #2
0
 /**
  * Add a protein object reference to geneProteins
  *
  * @uses \bcGen\MainBundle\Entity\Protein::setProteinGene()
  * 
  * @param \bcGen\MainBundle\Entity\Protein $protein
  *         	
  * @return Gene
  */
 public function addGeneProteins(\bcGen\MainBundle\Entity\Protein $protein)
 {
     $this->geneProteins[] = $protein;
     $protein->setProteinGene($this);
     return $this;
 }
Example #3
0
 /**
  * Test the setProteinGene method from the Protein class
  *
  * @uses \bcGen\MainBundle\Entity\Protein::setProteinGene()
  */
 public function testSetProteinGene()
 {
     echo "\n********************Test SetProteinGene()***************************************************\n";
     $this->protein->setProteinGene($this->gene);
     $this->assertEquals($this->gene, $this->protein->getProteinGene());
 }