function canIngestHere($collection_pid)
{
global $user;
module_load_include('php', 'Fedora_Repository', 'ObjectHelper');
$objectHelper = new ObjectHelper();
//get the childsecurity policy from the collection.
$policyStream = $objectHelper->getStream($collection_pid, SECURITYCLASS::$SECURITYSTREAM, false);
if ($policyStream == null) {
//no child policy stream so collection is wide open to anyone to ingest, that has the permission ingest in Drupal.
//maybe we should return false here?? would be more secure.
return true;
}
$allowedUsersAndRoles = $this->getAllowedUsersAndRoles($policyStream);
if (!$allowedUsersAndRoles) {
//error processing stream so don't let them ingest here.
return false;
}
$allowedUsers = $allowedUsersAndRoles["users"];
$allowedRoles = $allowedUsersAndRoles["roles"];
foreach ($user->roles as $role) {
if (in_array($role, $allowedRoles)) {
return true;
}
}
if (in_array($user->name, $allowedUsers)) {
return true;
}
return false;
}
function showQdc()
{
module_load_include('php', 'Fedora_Repository', 'ObjectHelper');
$objectHelper = new ObjectHelper();
//$returnValue['title']="Description";
$content = $objectHelper->getQDC($this->pid);
$collection_fieldset = array('#title' => t('Description'), '#collapsible' => TRUE, '#collapsed' => FALSE, '#value' => $content);
return theme('fieldset', $collection_fieldset);
}
private function getNid($pid)
{
module_load_include('php', 'Fedora_Repository', 'ObjectHelper');
//get Nid from Pid
$object = new ObjectHelper($pid);
$spec = $object->getStream($pid, 'MAG', 0);
$xml = new SimpleXMLElement($spec);
$nid = implode($xml->xpath('//nid'));
// $urlNid = implode($xml->xpath('//nurl'));
// $strNid = explode('node/', $urlNid);
// $nid = $strNid[1];
return $nid;
}
function createPolicy($collectionPid, &$dom, &$rootElement)
{
module_load_include('php', 'Fedora_Repository', 'ObjectHelper');
$objectHelper = new ObjectHelper();
$dsid = 'CHILD_SECURITY';
$policyStreamDoc = $objectHelper->getStream($collectionPid, $dsid, false);
if (!isset($policyStreamDoc)) {
return null;
//there is no policy stream so object will not have a policy stream
}
try {
$xml = new SimpleXMLElement($policyStreamDoc);
} catch (Exception $e) {
watchdog(t("Fedora_Repository"), t("Problem getting Security Policy!"), NULL, WATCHDOG_ERROR);
drupal_set_message(t('Problem getting Security Policy! ') . $e->getMessage(), 'error');
return false;
}
$policyElement = $dom->createDocumentFragment();
if (!$policyElement) {
drupal_set_message(t('error parsing security policy stream!'));
watchdog(t("Fedora_Repository"), t("Error parsing security policy stream, could not parse policy stream!"), NULL, WATCHDOG_NOTICE);
return false;
}
$dom->importNode($policyElement, true);
$value = $policyElement->appendXML($policyStreamDoc);
if (!$value) {
drupal_set_message(t('error creating security policy stream!'));
watchdog(t("Fedora_Repository"), t("Error creating security policy stream, could not parse collection policy template file!"), NULL, WATCHDOG_NOTICE);
return false;
}
$ds1 = $dom->createElement("foxml:datastream");
$rootElement->appendChild($ds1);
$ds1->setAttribute("ID", "POLICY");
$ds1->setAttribute("STATE", "A");
$ds1->setAttribute("CONTROL_GROUP", "X");
$ds1v = $dom->createElement("foxml:datastreamVersion");
$ds1->appendChild($ds1v);
$ds1v->setAttribute("ID", "POLICY.0");
$ds1v->setAttribute("MIMETYPE", "text/xml");
$ds1v->setAttribute("LABEL", "POLICY");
//$ds1v->setAttribute("FORMAT_URI","info:fedora/fedora-system:format/xml.fedora.audit");
$content = $dom->createElement("foxml:xmlContent");
$ds1v->appendChild($content);
$content->appendChild($policyElement);
return true;
}
public function initializeAssemblerFrom($sourceAssembler)
{
if (isset($sourceAssembler)) {
if (!isset($this->assembler)) {
$this->assembler = $this->initiateAssembler();
}
ObjectHelper::mergeWith($this->assembler, $sourceAssembler, TRUE);
}
}
public static function finalizeDataSourcePreparation(EnvironmentMetaModel $environment_metamodel, DataSourceMetaData $datasource) {
if (!isset($datasource->parentName)) {
return;
}
$parentDataSource = $environment_metamodel->getDataSource($datasource->parentName);
ObjectHelper::mergeWith($datasource, $parentDataSource, TRUE, ObjectHelper::EXISTING_PROPERTY_RULE__SKIP_IF_PRESENT);
}
public function initializeTypeFrom($sourceType, $replace = FALSE) {
if ($replace) {
$this->type = $this->initiateType();
}
if (isset($sourceType)) {
ObjectHelper::mergeWith($this->type, $sourceType, TRUE);
}
}
private function _loadDBSession()
{
$db_session = new Gamesession_delegate($this->id);
$db_session->load();
if (true === empty($db_session->id)) {
ObjectHelper::shallowCopy($this, $db_session);
$db_session->store();
$this->id = $db_session->id;
$this->_refreshSession();
}
}
public function initializeLevelsFrom($sourceLevels)
{
if (isset($sourceLevels)) {
foreach ($sourceLevels as $sourceLevel) {
$sourceLevelName = ObjectHelper::getPropertyValue($sourceLevel, 'name');
$level = $this->findLevel($sourceLevelName);
if (!isset($level)) {
$level = $this->registerLevel($sourceLevelName);
}
$level->initializeFrom($sourceLevel);
}
}
}
/**
* Sets public attributes on an object to those held in an associative array.
* By default does not copy entries in the array that do not correspond
* to an attribute in the object. Also takes an optional array
* of fields to ignore.
*
* @param array $array Associative array of values
* @param object $object Object to copy to
* @param boolean $ignoreMissingAttributes If True does not copy attributes not found
* in the object
* @param array $ignoreFields Array of fields to ignore
*/
function bindArrayToObject($array, &$object, $ignoreMissingAttributes = true, $ignoreFields = array())
{
$allowedKeys = array_keys($array);
$allowedKeys = array_diff($allowedKeys, $ignoreFields);
if (true === $ignoreMissingAttributes) {
$allowedKeys = array_intersect($allowedKeys, ObjectHelper::getPublicProperties($object));
}
if (is_array($array) && is_object($object)) {
foreach ($allowedKeys as $key) {
$object->{$key} = true === isset($array[$key]) ? $array[$key] : null;
}
}
return true;
}
/**
* Sets public attributes on an object to those held in another object
* By default does not copy entries in the array that do not correspond
* to an attribute in the object. Also takes an optional array
* of fields to ignore.
*
* @param object $src Object to copy from
* @param object $dest Object to copy to
* @param boolean $ignoreObjectsArrays If True objects and arrays are not copied
* @param boolean $ignoreMissingAttributes If True does not copy attributes not found
* in the object
* @param array $ignoreFields Array of fields to ignore
*/
function shallowCopy(&$src, &$dest, $ignoreObjectsArrays = true, $ignoreMissingAttributes = true, $ignoreFields = array())
{
$allowedKeys = ObjectHelper::getPublicProperties($src, $ignoreFields);
if (true === $ignoreMissingAttributes) {
$allowedKeys = array_intersect($allowedKeys, ObjectHelper::getPublicProperties($dest, $ignoreFields));
}
if (true === is_array($allowedKeys) && true === is_object($dest)) {
foreach ($allowedKeys as $key) {
$value = $src->{$key};
if (true === is_object($value) || true === is_array($value)) {
if ($ignoreObjectsArrays) {
continue;
} else {
$dest->{$key} =& $value;
}
} else {
$dest->{$key} = $value;
}
}
}
return true;
}
/**
* @param $data
* @return null|static
*/
static function deserialize($data)
{
$result = null;
$arr = null;
if (is_string($data)) {
$arr = json_decode($data, true);
} else {
if (is_array($data)) {
$arr = $data;
} else {
if (is_object($data)) {
$arr = get_object_vars($data);
}
}
}
if ($arr) {
/** @var $result DeserializeTrait */
$result = new static();
ObjectHelper::copyExistingProperties($arr, $result);
$result->deserializeExtra($arr);
}
return $result;
}
public function initializeAliasesFrom($sourceAliases, $replace = FALSE) {
if ($replace) {
$this->aliases = NULL;
}
if (isset($sourceAliases)) {
ObjectHelper::mergeWith($this->aliases, $sourceAliases, TRUE);
}
}
public function initializeDimensionsFrom($sourceDimensions) {
if (isset($sourceDimensions)) {
foreach ($sourceDimensions as $sourceDimension) {
$sourceDimensionName = ObjectHelper::getPropertyValue($sourceDimension, 'name');
$dimension = $this->findDimension($sourceDimensionName);
if (!isset($dimension)) {
$dimension = $this->registerDimension($sourceDimensionName);
}
$dimension->initializeFrom($sourceDimension);
}
}
}
/**
* gets a list of datastreams and related function that we should use to show datastreams in their own fieldsets
* from the content model associated with the object
*/
function createExtraFieldsets($pid, $contentModel)
{
//$models = $collectionHelper->getContentModels($collectionPid, false);
// possible problem in below if the collection policy has multiple content models
//with different pids but same dsid we could get wrong one, low probability and functionality
// will probably change for fedora version 3.
if (empty($contentModel)) {
return null;
}
try {
$contentModelXMLStream = $this->getStream($contentModel, 'ISLANDORACM', false);
} catch (Exception $e) {
}
if (empty($contentModelXMLStream)) {
return null;
}
$count = 0;
$output = '';
try {
$xml = new SimpleXMLElement($contentModelXMLStream);
} catch (Exception $e) {
//just show default dc or qdc as we could not find a content model
module_load_include('php', 'Fedora_Repository', 'ObjectHelper');
$objectHelper = new ObjectHelper();
$metaDataText = 'Description';
$body = $objectHelper->getQDC($pid);
$fieldset = array('#title' => t($metaDataText), '#collapsible' => TRUE, '#collapsed' => TRUE, '#value' => $body);
$output .= theme('fieldset', $fieldset);
return $output;
}
if ($xml->display_in_fieldset->datastream != null) {
foreach ($xml->display_in_fieldset->datastream as $datastream) {
$count++;
$dsId = $datastream['id'];
$expanded = $datastream['expanded'];
$phpFile = '';
if (!empty($datastream->method->file)) {
$phpFile = strip_tags($datastream->method->file->asXML());
}
if (!empty($phpFile)) {
$phpClass = strip_tags($datastream->method->class_name->asXML());
$phpMethod = strip_tags($datastream->method->method_name->asXML());
require_once drupal_get_path('module', 'Fedora_Repository') . '/' . $phpFile;
$thisClass = new $phpClass($pid);
$output .= $thisClass->{$phpMethod}();
}
}
}
if ($count < 1) {
//just show default dc or qdc as we could not find a content model
$metaDataText = 'Description';
$body = $this->getQDC($pid);
$fieldset = array('#title' => t($metaDataText), '#collapsible' => TRUE, '#collapsed' => TRUE, '#value' => $body);
$output .= theme('fieldset', $fieldset);
}
if ('ilives:pageCModel' == $contentModel || 'ilives:bookCModel' == $contentModel) {
global $user;
$qs = '';
if ($user->uid != 0) {
$qs = '?uid=' . base64_encode($user->name . ':' . $user->sid);
}
$viewer_url = variable_get('fedora_base_url', '') . '/get/' . $pid . '/ilives:viewerSdef/getViewer' . $qs;
$html = '<iframe src="' . $viewer_url . '" frameborder="0" style="width: 100%; height: 400px;">Errors: unable to load viewer</iframe>';
$fieldset = array('#title' => t('Viewer'), '#collapsible' => TRUE, '#collapsed' => $collapsed, '#value' => $html);
return theme('fieldset', $fieldset);
}
return $output;
}
public function initializeFrom($sourceReferencePointColumn)
{
if (isset($sourceReferencePointColumn)) {
$this->datasetName = ObjectHelper::getPropertyValue($sourceReferencePointColumn, 'datasetName');
$this->columnName = ObjectHelper::getPropertyValue($sourceReferencePointColumn, 'columnName');
$this->shared = ObjectHelper::getPropertyValue($sourceReferencePointColumn, 'shared');
}
}
function getStream($pid, $dsid, $showError = 1)
{
module_load_include('php', 'Fedora_Repository', 'ObjectHelper');
$objectHelper = new ObjectHelper();
return $objectHelper->getStream($pid, $dsid, $showError);
}
public function execute() {
$output = curl_exec($this->handler->ch);
$isOutputRequired = isset($this->handler->outputFormatter);
$error = curl_error($this->handler->ch);
if ($error != '') {
$this->errorResourceExecution($this->handler->resourceId, $error);
}
// storing some information about the execution into log
$preparedExecutionInfo = NULL;
ObjectHelper::copySelectedProperties(
$preparedExecutionInfo, curl_getinfo($this->handler->ch),
array(
'url', 'content_type', 'redirect_url', 'http_code', 'redirect_count',
'namelookup_time', 'connect_time', 'pretransfer_time', 'starttransfer_time', 'redirect_time', 'total_time',
'size_upload', 'upload_content_length', 'speed_upload',
'speed_download', 'download_content_length'));
LogHelper::log_debug($preparedExecutionInfo);
if ($isOutputRequired) {
try {
$output = $this->handler->outputFormatter->format($this->handler->resourceId, $output);
}
catch (Exception $e) {
LogHelper::log_debug(new PreservedTextMessage($output));
throw $e;
}
}
if ($preparedExecutionInfo->http_code != 200) {
// only if formatting completed successfully we will reach this point
$this->errorResourceExecution($this->handler->resourceId, $preparedExecutionInfo->http_code);
}
return $isOutputRequired ? $output : NULL;
}
protected function getColumnValue($record, $columnName) {
return ObjectHelper::getPropertyValue($record, $columnName);
}
/**
* Serialize a room to JSON
*
* @param Room_delegate $room
* @return RoomVO
*/
private function _serializeRoom(&$room)
{
$this->load->helper('badge');
$public_dir = Badge_helper::getPublicDirectoryPath();
$room_vo = new RoomVO();
ObjectHelper::shallowCopy($room, $room_vo);
$question =& $this->current_room->getQuestion();
if (false === empty($question)) {
$question_vo = new QuestionVO();
ObjectHelper::shallowCopy($question, $question_vo);
$question_vo->completed = in_array($question->id, $this->gamesession->getCompletedQuestions());
$responses =& $this->current_room->getResponses();
foreach ($responses as $response) {
$response_vo = new ResponseVO();
ObjectHelper::shallowCopy($response, $response_vo);
$filename = $public_dir . DIRECTORY_SEPARATOR . $response_vo->image;
/**
* Get image sizes to avoid issues in IE6
*/
if (true === file_exists($filename)) {
$sizes = getimagesize($filename);
$response_vo->width = $sizes[0];
$response_vo->height = $sizes[1];
}
$response_vo->image = site_url($response_vo->image);
$response_vo->image_hover = site_url($response_vo->image_hover);
$question_vo->responses[] = $response_vo;
}
$room_vo->question = $question_vo;
}
$room_vo->image = site_url($room_vo->image);
$room_vo->map_image = site_url($room_vo->map_image);
foreach ($room_vo->navigation as $direction => $value) {
$navigation_allowed = new AllowedNavigationVO();
$navigation_allowed->allowed = $this->_isDirectionAllowed($this->gamesession->getCurrentOrientation(), $direction, &$room);
if (true == $navigation_allowed->allowed) {
switch ($direction) {
case 'left':
case 'right':
$navigation_allowed->message = 'Turn ' . $this->_getOrientationFromDirection($direction, $this->gamesession->getCurrentOrientation());
break;
case 'forward':
$navigation_allowed->message = 'Proceed ' . $this->_getOrientationFromDirection($direction, $this->gamesession->getCurrentOrientation());
break;
case 'back':
$navigation_allowed->message = 'Backtrack';
break;
}
}
$room_vo->navigation[$direction] = $navigation_allowed;
//$this->_isDirectionAllowed($this->gamesession->getCurrentOrientation(), $direction, &$room);
}
return $room_vo;
}
public static function search(array $array = NULL, $propertyName, $needle) {
if (isset($array)) {
foreach ($array as $key => $item) {
$v = ObjectHelper::getPropertyValue($item, $propertyName);
if ($v == $needle) {
return $key;
}
}
}
return NULL;
}
function showCritter()
{
$dsid = 'CRITTER';
$path = drupal_get_path('module', 'Fedora_Repository');
require_once drupal_get_path('module', 'Fedora_Repository') . '/ObjectHelper.php';
require_once drupal_get_path('module', 'Fedora_Repository') . '/CollectionClass.php';
$objectHelper = new ObjectHelper();
$collectionHelper = new CollectionClass();
$xmlstr = $collectionHelper->getStream($this->pid, "CRITTER");
html_entity_decode($xmlstr);
if ($xmlstr == null || strlen($xmlstr) < 5) {
return " ";
}
try {
$proc = new XsltProcessor();
} catch (Exception $e) {
drupal_set_message(t($e->getMessage()), 'error');
return " ";
}
$xsl = new DomDocument();
$xsl->load($path . '/mnpl/xsl/critter.xsl');
$input = new DomDocument();
$input->loadXML(trim($xmlstr));
$xsl = $proc->importStylesheet($xsl);
$newdom = $proc->transformToDoc($input);
$content = $newdom->saveXML();
$pid = $this->pid;
session_start();
$_SESSION['pid'] = $pid;
// set labid as session variable to build identifier in add fraction, etc
$cxl = new SimpleXMLElement($xmlstr);
$labid = implode($cxl->xpath('//critters:lab_id'));
$_SESSION['labid'] = $labid;
$itqlQuery = 'select $object $title from <#ri> where $object <fedora-model:label> $title and $object <fedora-rels-ext:isPartOf> <info:fedora/' . $pid . '> and $object <fedora-model:state> <info:fedora/fedora-system:def/model#Active> order by $title';
$relatedItems = $collectionHelper->getRelatedItems($this->pid, $itqlQuery);
$sxe = new SimpleXMLElement($relatedItems);
$nmspace = $sxe->getNamespaces(true);
$regspace = $sxe->registerXPathNamespace('ri', implode($nmspace));
// begin fractions
global $base_url;
if (user_access('edit fedora meta data')) {
$editspec = '<a href =' . $base_url . '/fedora/repository/editmetadata/' . $pid . '/' . $dsid . '>Edit This Specimen</a><br>';
} else {
$editspec = '';
}
if (user_access('ingest new fedora objects')) {
$flabel = '<h4>Fractions — <a href="' . $base_url . '/fedora/ingestObject/vre:mnpl-fractions/MNPL%20Fraction%20Collection/mnpl-fractionCModel">Add Fraction</a></h4>';
} else {
$flabel = '<h4>Fractions</h4>';
}
if (stristr(implode($sxe->xpath('//ri:title')), 'fraction')) {
$fraction .= '<table width="100%" cellpadding="2"><tr><td>Identifier</td><td>Weight</td><td>PTP1B</td><td>HCT116</td><td>HELA</td><td>PC3</td><td>ARE</td><td>Antiproliferative</td></tr>';
foreach ($sxe->xpath('//@uri') as $link) {
if (strstr($link, 'fraction')) {
$link = substr($link, 12);
$fraction .= '<tr>';
$fraction .= '<td><a href = "' . $base_url . '/fedora/repository/' . $link . '">' . substr($link, 18) . '</a></td>';
$fraction .= $this->show_fraction_details($link);
$fraction .= '</tr>';
}
}
$fraction .= '</table>';
} else {
$fraction = "<div>No Fractions present for this Specimen</div>";
}
// return compounds
$clabel = '<br /><h4>Compounds';
if (user_access('ingest new fedora objects')) {
$clabel .= ' — <a href="' . $base_url . '/fedora/ingestObject/vre:mnpl-compounds">Add Compound</a></h4>';
}
if (stristr(implode($sxe->xpath('//ri:title')), 'compound')) {
// if(in_array('COMPOUND',$sxe->xpath('//ri:contentmod'))){
$compound .= '<table width="100%" cellpadding="2"><tr><td>Identifier</td><td>Weight</td><td>PTP1B</td><td>HCT116</td><td>HELA</td><td>PC3</td><td>ARE</td><td>Antiproliferative</td></tr>';
foreach ($sxe->xpath('//@uri') as $link) {
if (strstr($link, 'compound')) {
$link = substr($link, 12);
$compound .= '<tr>';
$compound .= '<td><a href = "' . $base_url . '/fedora/repository/' . $link . '">' . substr($link, 18) . '</a></td>';
$compound .= $this->show_compound_details($link);
$compound .= '</tr>';
}
}
$compound .= '</table>';
} else {
$compound = "<div>No Compounds present for this Specimen</div>";
}
$datastream_list = $objectHelper->get_datastreams_list_asSimpleXML($this->pid);
$thumbs = '<div><p>';
$thumbs .= '<a href="' . $base_url . '/fedora/repository/' . $pid . '/OBJ" target="_blank"><img src="' . $base_url . '/fedora/imageapi/' . $pid . '/OBJ?op=scale&height=100" /></a> ';
foreach ($datastream_list as $datastream) {
foreach ($datastream as $datastreamValue) {
$test = substr($datastreamValue->ID, 0, 5);
if ($test == 'IMAGE') {
$thumbs .= '<a href="' . $base_url . '/fedora/repository/' . $pid . '/' . $datastreamValue->ID . '" target="_blank"><img src="' . $base_url . '/fedora/imageapi/' . $pid . '/' . $datastreamValue->ID . '?op=scale&height=100" /></a> ';
}
}
}
$thumbs .= '</p></div><br />';
$collection_fieldset = array('#title' => t('MNPL Critter Record'), '#collapsible' => TRUE, '#collapsed' => FALSE, '#value' => $thumbs . $content . $editspec . $flabel . $fraction . $clabel . $compound);
return theme('fieldset', $collection_fieldset);
}
<h2>Questions</h2>
<?php
$questions = $this->all_levels->getQuestions($level->id);
foreach ($questions as $question) {
?>
<div class="question">
<?php
echo ObjectHelper::dumpPublicProperties($question, array('id', 'action_function', 'target_image', 'target_pos_x', 'target_pos_y', 'target_height', 'target_width'));
?>
<h3>Responses</h3>
<?php
$responses = $this->all_levels->getResponses($question->id);
foreach ($responses as $response) {
?>
<div class="response">
<?php
echo ObjectHelper::dumpPublicProperties($response, array('id', 'question_id', 'more_information', 'image_pos_x', 'image_pos_y'));
?>
</div>
<?php
}
?>
</div>
<?php
}
?>
</div>
<?php
}
public function initializeColumnFrom($sourceColumn)
{
$sourceColumnName = ObjectHelper::getPropertyValue($sourceColumn, 'name');
$column = $this->findColumn($sourceColumnName);
$isColumnNew = !isset($column);
if ($isColumnNew) {
$column = $this->initiateColumn();
$sourceColumnIndex = ObjectHelper::getPropertyValue($sourceColumn, 'columnIndex');
if (!isset($sourceColumnIndex)) {
// we do not check for last column index here and that is correct
// we just assign index based on column count
$column->columnIndex = count($this->columns);
}
}
$column->initializeFrom($sourceColumn);
if ($isColumnNew) {
$this->registerColumnInstance($column);
}
return $column;
}
/**
* Returns a list of columns, one for each public attribute of the delegate
*
* @access protected
* @return array List of columns
*/
function _getColumns()
{
return ObjectHelper::getPublicProperties($this);
}
private function _refreshSession()
{
$ci =& get_instance();
$ci->session->set_userdata(MEMBER_SESSION_KEY, ObjectHelper::toArray($this, false));
}
public function initializeTypeFrom($sourceType)
{
if (isset($sourceType)) {
ObjectHelper::mergeWith($this->type, $sourceType, TRUE);
}
}
public function initializeInstanceFrom($source)
{
ObjectHelper::mergeWith($this, $source);
}
function buildFractionEditForm()
{
module_load_include('php', 'Fedora_Repository', 'ObjectHelper');
$object = new ObjectHelper();
$frac = $object->getStream($this->pid, 'FRACTION', 0);
$doc = new DomDocument();
if (!isset($frac)) {
drupal_set_message(t('Error getting fraction metadata stream'), 'error');
return null;
}
$xml = new SimpleXMLElement($frac);
$radioValues = array();
$radioValues['No_Assay'] = 'No_Assay';
$radioValues['Hit'] = 'Hit';
$radioValues['Strong'] = 'Strong';
$radioValues['Medium'] = 'Medium';
$radioValues['Low'] = 'Low';
$radioValues['Inactive'] = 'Inactive';
$form = array();
$identifier = $xml->xpath('//fractions:identifier');
$form['identifier'] = array('#type' => 'hidden', '#title' => t('<strong>Identifier</strong>'), '#value' => implode($identifier));
$form['ident'] = array('#type' => 'item', '#title' => t('<strong>Identifier</strong>'), '#value' => implode($identifier));
$plate = $xml->xpath('//fractions:plate');
$form['plate'] = array('#type' => 'textfield', '#default_value' => implode($plate), '#title' => t('<strong>Plate</strong>'));
$weight = $xml->xpath('//fractions:weight');
$form['weight'] = array('#type' => 'textfield', '#default_value' => implode($weight), '#title' => t('<strong>Weight</strong>'));
$pt = $xml->xpath('//fractions:ptp1b');
$form['pt'] = array('#type' => 'radios', '#default_value' => implode($pt), '#options' => $radioValues, '#title' => t('<strong>PTP1B</strong>'));
$pt_com = $xml->xpath('//fractions:ptp1b_com');
$form['pt_com'] = array('#type' => 'textfield', '#default_value' => implode($pt_com), '#title' => t('<strong>PTP1B Comments</strong>'));
$hct = $xml->xpath('//fractions:hct116');
$form['hct'] = array('#type' => 'radios', '#default_value' => implode($hct), '#options' => $radioValues, '#title' => t('<strong>HCT116</strong>'));
$hct_com = $xml->xpath('//fractions:hct116_com');
$form['hct_com'] = array('#type' => 'textfield', '#default_value' => implode($hct_com), '#title' => t('<strong>HCT116 Comments</strong>'));
$hela = $xml->xpath('//fractions:hela');
$form['hela'] = array('#type' => 'radios', '#default_value' => implode($hela), '#options' => $radioValues, '#title' => t('<strong>HELA</strong>'));
$hela_com = $xml->xpath('//fractions:hela_com');
$form['hela_com'] = array('#type' => 'textfield', '#default_value' => implode($hela_com), '#title' => t('<strong>HELA Comments</strong>'));
$pc3 = $xml->xpath('//fractions:pc3');
$form['pc3'] = array('#type' => 'radios', '#default_value' => implode($pc3), '#options' => $radioValues, '#title' => t('<strong>PC3</strong>'));
$pc3_com = $xml->xpath('//fractions:pc3_com');
$form['pc3_com'] = array('#type' => 'textfield', '#default_value' => implode($pc3_com), '#title' => t('<strong>PC3 Comments</strong>'));
$are = $xml->xpath('//fractions:are');
$form['are'] = array('#type' => 'radios', '#default_value' => implode($are), '#options' => $radioValues, '#title' => t('<strong>ARE</strong>'));
$are_com = $xml->xpath('//fractions:are_com');
$form['are_com'] = array('#type' => 'textfield', '#default_value' => implode($are_com), '#title' => t('<strong>ARE Comments</strong>'));
$antiproliferative = $xml->xpath('//fractions:antiproliferative');
$form['antiproliferative'] = array('#type' => 'radios', '#default_value' => implode($antiproliferative), '#options' => $radioValues, '#title' => t('<strong>Antiproliferative</strong>'));
$antiproliferative_com = $xml->xpath('//fractions:antiproliferative_com');
$form['antiproliferative_com'] = array('#type' => 'textfield', '#default_value' => implode($antiproliferative_com), '#title' => t('<strong>Antiproliferative Comments</strong>'));
$location = $xml->xpath('//fractions:location');
$form['location'] = array('#type' => 'textfield', '#default_value' => implode($location), '#title' => t('<strong>Location</strong>'));
$notes = $xml->xpath('//fractions:notes');
$form['notes'] = array('#type' => 'textarea', '#default_value' => implode($notes), '#title' => t('<strong>Notes</strong>'));
$form['#redirect'] = 'fedora/repository/' . $this->pid;
$form['pid'] = array('#type' => 'hidden', '#value' => $this->pid);
$form['dsid'] = array('#type' => 'hidden', '#value' => 'FRACTION');
$form['submit'] = array('#type' => 'submit', '#value' => 'Update');
return $form;
}
public function initializeInstanceFrom($sourceDataSource) {
// we need to support some unknown composite properties
ObjectHelper::mergeWith($this, $sourceDataSource, TRUE);
}
