function getSubClassAndProperty($ontology_uri, &$results, $tmp_iri)
{
global $ns_rdf, $ns_rdfs, $ns_owl, $num_queries, $processed_iris, $included_iris, $parent_included_iris, $strOutput;
$querystring = "\r\nPREFIX rdf: <{$ns_rdf}>\r\nPREFIX rdfs: <{$ns_rdfs}>\r\nPREFIX owl: <{$ns_owl}>\r\n\r\nSELECT DISTINCT *\r\n\r\nFROM <{$ontology_uri}>\r\n\t\r\nWHERE { \r\n\t{\r\n\t\t?s rdfs:subClassOf <{$tmp_iri}> .\r\n\t\t?s rdfs:label ?o\r\n\t}\r\n\tUNION\r\n\t{\r\n\t\t?s owl:equivalentClass ?s1 .\r\n\t\t?s1 owl:intersectionOf ?s2 .\r\n\t\t?s2 rdf:first <{$tmp_iri}> .\r\n\t\t?s rdfs:label ?o\r\n\t}\r\n}";
$tmp_results = json_query($querystring);
$num_queries++;
if (!empty($tmp_results)) {
foreach ($tmp_results as $tmp_result) {
$tmp_iri0 = $tmp_result['s'];
if (!isset($processed_iris[$tmp_iri0]) && !isset($included_iris[$tmp_iri0]) && !iriImported($tmp_iri0)) {
$strOutput .= "\r\n<rdf:Description rdf:about=\"{$tmp_iri0}\">\r\n\t\t\t<rdfs:subClassOf rdf:resource=\"{$tmp_iri}\"/>\r\n\t\t </rdf:Description>\r\n";
$results[$tmp_iri0] = $tmp_result['o'];
getSubClassAndProperty($ontology_uri, $results, $tmp_iri0);
}
}
}
$querystring = "\r\nPREFIX rdf: <{$ns_rdf}>\r\nPREFIX rdfs: <{$ns_rdfs}>\r\nPREFIX owl: <{$ns_owl}>\r\n\r\nSELECT DISTINCT *\r\n\r\nFROM <{$ontology_uri}>\r\n\t\r\nWHERE { \r\n\t{\r\n\t\t?s rdfs:subPropertyOf <{$tmp_iri}> .\r\n\t\t?s rdfs:label ?o\r\n\t}\r\n\tUNION\r\n\t{\r\n\t\t?s owl:equivalentProperty ?s1 .\r\n\t\t?s1 owl:intersectionOf ?s2 .\r\n\t\t?s2 rdf:first <{$tmp_iri}> .\r\n\t\t?s rdfs:label ?o\r\n\t}\r\n}";
$tmp_results = json_query($querystring);
$num_queries++;
if (!empty($tmp_results)) {
foreach ($tmp_results as $tmp_result) {
$tmp_iri0 = $tmp_result['s'];
if (!isset($processed_iris[$tmp_iri0]) && !isset($included_iris[$tmp_iri0]) && !iriImported($tmp_iri0)) {
$strOutput .= "\r\n<rdf:Description rdf:about=\"{$tmp_iri0}\">\r\n\t\t\t<rdfs:subPropertyOf rdf:resource=\"{$tmp_iri}\"/>\r\n\t\t </rdf:Description>\r\n";
$results[$tmp_iri0] = $tmp_result['o'];
getSubClassAndProperty($ontology_uri, $results, $tmp_iri0);
}
}
}
}
$tmp_results['nodeID://' . $match] = 'NA';
}
}
if ($includeAllAxiomsRecursively) {
preg_match_all('/resource="(.+?)"/', $output, $matches);
foreach ($matches[1] as $match) {
if (!isset($processed_iris[$match]) && !isset($included_iris[$match]) && !iriImported($match)) {
$tmp_results[$match] = 'NA';
}
}
}
//get labels and types for related terms
if ($includeAllAxioms) {
preg_match_all('/resource="(.+?)"/', $output, $matches);
foreach ($matches[1] as $match) {
if (!isset($processed_iris[$match]) && !isset($included_iris[$match]) && !iriImported($match)) {
$related_terms[$match] = 'NA';
}
}
}
preg_match_all('/<rdf:Description rdf:about="([^"]+?)"><rdf:type rdf:resource="http:\\/\\/www.w3.org\\/2002\\/07\\/owl#Class"\\/><\\/rdf:Description>/', $output, $matches);
foreach ($matches[1] as $match) {
$strOutput .= " <rdf:Description rdf:about=\"{$match}\">\r\n\t<obo:IAO_0000412 rdf:resource=\"{$ontology_original_uri}\"/>\r\n </rdf:Description>\r\n";
}
preg_match_all('/<rdf:Description rdf:about="([^"]+?)"><rdf:type rdf:resource="http:\\/\\/www.w3.org\\/2002\\/07\\/owl#ObjectProperty"\\/><\\/rdf:Description>/', $output, $matches);
foreach ($matches[1] as $match) {
$strOutput .= " <rdf:Description rdf:about=\"{$match}\">\r\n\t<obo:IAO_0000412 rdf:resource=\"{$ontology_original_uri}\"/>\r\n </rdf:Description>\r\n";
}
preg_match_all('/<rdf:Description rdf:about="([^"]+?)"><rdf:type rdf:resource="http:\\/\\/www.w3.org\\/2002\\/07\\/owl#DatatypeProperty"\\/><\\/rdf:Description>/', $output, $matches);
foreach ($matches[1] as $match) {
$strOutput .= " <rdf:Description rdf:about=\"{$match}\">\r\n\t<obo:IAO_0000412 rdf:resource=\"{$ontology_original_uri}\"/>\r\n </rdf:Description>\r\n";