function main()
{
$callback = '';
if (isset($_GET['callback'])) {
$callback = $_GET['callback'];
}
if (isset($_GET['rid'])) {
$rid = $_GET['rid'];
}
$accessions = array();
$xml_filename = 'tmp/' . $rid . '.xml';
$xml = file_get_contents($xml_filename);
$dom = new DOMDocument();
$dom->loadXML($xml);
$xpath = new DOMXPath($dom);
$xpath_query = "//Hit_accession";
$nodeCollection = $xpath->query($xpath_query);
foreach ($nodeCollection as $node) {
$accessions[] = $node->firstChild->nodeValue;
}
$ids = array_slice($accessions, 0, NumSequences);
$hits = fetch_sequences($ids);
if ($callback != '') {
echo $callback . '(';
}
echo json_format(json_encode($hits));
if ($callback != '') {
echo ')';
}
}
function fetch_one($id)
{
global $config;
$sequence = fetch_sequence($id);
//print_r($sequence);
}
if (0) {
$id = 'DQ502910';
$id = 'AY273103';
$id = 'FJ559180';
//$id = 'DQ502910';
//$id = 'DQ095127';
//$id = 'HQ918317';
$id = 'AY967993';
$id = 'EU220392';
$id = 'HM407788';
$id = 'AY014968';
$id = 20153277;
$id = 537783611;
$id = 13559894;
$id = 574587242;
fetch_one($id);
}
// test
if (0) {
$ids = array('DQ502910');
$ids = array('AY273103');
$ids = array('FJ559180');
$hits = fetch_sequences($ids);
print_r($hits);
}
