$arrayResponse = sendRequest($rpc_server, '/', $xmlRequest, $rpc_port);
echo json_encode($arrayResponse);
} else {
if ($posttype == "processInfiniumDataset") {
$file_id = $_POST['file_id'];
$software = $_POST['software'];
$referenceDataset = $_POST['reference_dataset'];
$name = $_POST['name'];
$scoresIndex = $_POST['scores_index'];
$hypoIndex = $_POST['hypo_index'];
$hyperIndex = $_POST['hyper_index'];
$rankIndex = $_POST['rank_index'];
$email = $_POST['email'];
$moreInfoLink = $_POST['more_info_link'];
$description = $_POST['description'];
$logxmlRequest = xmlrpc_encode_request('log_me', array(anonimizedUser() . " processing " . $name . " from software " . $software));
sendRequest($rpc_server, '/', $logxmlRequest, $rpc_port);
$xmlRequest = xmlrpc_encode_request('processInfiniumDataset', array($file_id, $software, $referenceDataset, $name, $scoresIndex, $hypoIndex, $hyperIndex, $rankIndex, $email, $moreInfoLink, $description));
$arrayResponse = sendRequest($rpc_server, '/', $xmlRequest, $rpc_port);
echo json_encode($arrayResponse);
} else {
echo "POST incorrect" . $posttype;
}
}
}
}
}
}
} else {
echo "Nothing selected. You must specify the 'type' parameter";
}
require_once "grab_globals.lib.php";
include "xmlrpc_submit.php";
include "settings.php";
include "utils.php";
// This part send a request for basic information for the regions supported by the current started server
ob_start();
$xmlRequest = xmlrpc_encode_request('getStatus', array($_SERVER['SERVER_NAME'], "upload"));
$arrayResponse = sendRequest($rpc_server, '/', $xmlRequest, $rpc_port);
ob_end_clean();
if ($arrayResponse === "OK") {
//header('Content-Type: text/html'); // plain html file
} else {
//echo "not ok $arrayResponse";
if (strlen(strstr($_SERVER['SERVER_NAME'], 'moebius')) == 0) {
$subject = "EpiExplorer XMLRPC Server is not working! (" . date("H:i:s d.m.y") . " , " . anonimizedUser() . ")";
$body = "On " . date("H:i:s d.m.y") . " requested by " . $_SERVER["REMOTE_ADDR"] . " (" . gethostbyaddr($_SERVER["REMOTE_ADDR"]) . "\n" . "Status:'" . $arrayResponse . "'\n" . "More info: \n" . "Server name: " . $_SERVER['SERVER_NAME'] . "\n" . "Request URI: " . $_SERVER['REQUEST_URI'] . "\n" . "Http referer: " . $_SERVER['HTTP_REFERER'] . "\n";
if (mail($contact_email, $subject, $body)) {
header('Location: maintenance.php');
} else {
header('Location: maintenance.php');
}
} else {
header('Location: maintenance.php');
}
}
?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<?php
require_once "grab_globals.lib.php";
include "xmlrpc_submit.php";
include "settings.php";
include "utils.php";
require_once 'phpJSON/JSON.php';
header('Content-Type: text/html');
// plain html file
if (isset($_GET['datasetID'])) {
$datasetID = $_GET['datasetID'];
// This part send a request for basic information for the regions supported by the current started server
$logxmlRequest = xmlrpc_encode_request('log_me', array(anonimizedUser() . " requests the status for dataset:'{$datasetID}' "));
sendRequest($rpc_server, '/', $logxmlRequest, $rpc_port);
$xmlRequest = xmlrpc_encode_request('getDatasetStatus', array($datasetID));
$arrayResponse = sendRequest($rpc_server, '/', $xmlRequest, $rpc_port);
if ($arrayResponse[0] == 0) {
echo "Your dataset was successfully processed and is ready to use! <br/><br/>You can access it directly <a href='index.php?userdatasets={$datasetID}' target='_blank'>here</a> or load it from the <a href=\"index.php\" target='_blank'>EpiExplorer</a> menu using its unique identifier <b>{$datasetID}</b>";
} else {
if ($arrayResponse[0] == 1) {
echo "Your dataset is annotated by EpiExplorer at the moment! <br/><b>" . $arrayResponse[1] . "</b><br/> Please check again later.<br/> <i>We recommend providing your email for dataset computation as you will receive an automatic notification as soon as your dataset is processed.</i>";
} else {
if ($arrayResponse[0] == 2) {
if (count($arrayResponse) > 1) {
echo "Your dataset is still in the waiting queue.<br/> There are " . $arrayResponse[1] . " computations scheduled before it.<br/><br/> Please check again later. <br/><i>We recommend providing your email for dataset computation as you will receive an automatic notification as soon as your dataset is processed.</i>'";
} else {
echo "Your dataset is still in the waiting queue.<br/><br/> Please check again later. <br/><i>We recommend providing your email for dataset computation as you will receive an automatic notification as soon as your dataset is processed.</i>'";
}
} else {
if ($arrayResponse[0] == 3) {
echo "There was an error when processing your dataset.<br/><br/> The error message was '" . $arrayResponse[1] . "'<br/><br/> If the error message is unclear please contact us for more information at " . $contact_email;
<?php
require_once "grab_globals.lib.php";
include "xmlrpc_submit.php";
include "settings.php";
include "utils.php";
// This part send a request for basic information for the regions supported by the current started server
ob_start();
$xmlRequest = xmlrpc_encode_request('getStatus', array());
$arrayResponse = sendRequest($rpc_server, '/', $xmlRequest, $rpc_port);
ob_end_clean();
if ($arrayResponse === "OK") {
} else {
//echo "not ok $arrayResponse";
$subject = "CGS XMLRPC Server is not working! (" . date("H:i:s d.m.y") . " , " . anonimizedUser() . ")";
$body = "On " . date("H:i:s d.m.y") . " requested by " . anonimizedUser() . "\nStatus:'" . $arrayResponse . "'";
if (mail($contact_email, $subject, $body)) {
header('Location: maintenance.php');
} else {
header('Location: maintenance.php');
}
}
?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<link href="menu/menu.css" rel="stylesheet" type="text/css" />
<!-- Global var for commonExploreCGS.js -->
<?php
require_once "grab_globals.lib.php";
include "xmlrpc_submit.php";
$rpc_server = 'infao3806';
$rpc_dataset_port = '51525';
$rpc_query_port = '51515';
if (isset($_GET["id"])) {
$exportID = $_GET["id"];
$logxmlRequest = xmlrpc_encode_request('log_me', array(anonimizedUser() . " requested the exported dataset " . $exportID));
sendRequest($rpc_server, '/', $logxmlRequest, $rpc_dataset_port);
$dir = "/TL/www/cosgen/www/pub/Datasets/";
$file = $dir . $exportID . ".zip";
if (file_exists($file)) {
// Generate the server headers
header('Content-type: application/x-compressed' . "\n");
header('Content-type: application/zip' . "\n");
header('Content-Disposition: filename="' . basename($file) . '"');
header("Content-Transfer-Encoding: binary");
header('Accept-Ranges: bytes');
header('Content-length: ' . filesize($file) . "\n");
/* The three lines below basically make the
download non-cacheable */
header("Cache-control: private");
header('Pragma: private');
header("Expires: Mon, 26 Jul 1997 05:00:00 GMT");
@readfile($file);
die;
} else {
echo "No file corresponding to id " . $exportID;
}
