/**
* Store a newly created resource in storage.
*
* @return Response
*/
public function store()
{
$title = Request::input('title');
$briefDescription = Request::input('briefDescription');
$categoriesId = Request::input('categories');
$sample = new Sample();
$sample = Sample::create(['title' => $title, 'briefDescription' => $briefDescription]);
$sample->categories()->sync($categoriesId);
if (Request::hasFile('image')) {
$file = Request::file('image');
$filename = time() * rand(1, 10) . '.' . $file->getClientOriginalExtension();
$file = $file->move(public_path() . '/uploadedFiles', $filename);
$sample->image = '/uploadedFiles/' . $filename;
$sample->save();
}
flash('The Work Sample Was Created Successfully');
return redirect('/WorkSample');
}
/**
* @param $filename
* @param $batchId
* @param $projectId
* @param $plate
* @param $well
* @param string $description
* @param int $runs
* @param int $lanes
* @param string $delimiter
* @return bool
*/
private function addData($filename, $batchId, $plate = '', $well = '', $description = '', $runs = 0, $lanes = 0, $delimiter = ',')
{
$header = NULL;
if (($handle = fopen($filename, 'r')) !== FALSE) {
while (($row = fgetcsv($handle, 1000, $delimiter)) !== FALSE) {
if (!$header) {
if ($this->checkHeaders($row) !== FALSE) {
$header = $row;
} else {
return FALSE;
}
} else {
// Check for unique name
$dupes_in_db = DB::table('samples')->where('sample_id', 'like', $row[0])->get();
$number_of_dupes = count($dupes_in_db) + 1;
//TODO Check for compatiblity
$this->getI7IndexId($row[1]);
$sample = Sample::create(array('batch_id' => $batchId, 'sample_id' => $row[0], 'sample_id_suffix' => $number_of_dupes, 'plate' => $plate, 'well' => $well, 'i7_index_id' => $this->getI7IndexId($row[1]), 'i5_index_id' => $this->getI5IndexId($row[3]), 'description' => $description, 'runs_remaining' => $runs, 'instrument_lane' => $lanes));
}
}
fclose($handle);
}
}
