include_once $serverRoot . '/classes/SpecProcessorManager.php';
include_once $serverRoot . '/classes/ImageBatchProcessor.php';
include_once $serverRoot . '/classes/ImageProcessor.php';
include_once $serverRoot . '/classes/SpecProcessorOcr.php';
header("Content-Type: text/html; charset=" . $charset);
if (!$SYMB_UID) {
header('Location: ../../profile/index.php?refurl=../collections/specprocessor/processor.php?' . $_SERVER['QUERY_STRING']);
}
$action = array_key_exists('submitaction', $_REQUEST) ? $_REQUEST['submitaction'] : '';
$collid = array_key_exists('collid', $_REQUEST) ? $_REQUEST['collid'] : 0;
$spprid = array_key_exists('spprid', $_REQUEST) ? $_REQUEST['spprid'] : 0;
$tabIndex = array_key_exists("tabindex", $_REQUEST) ? $_REQUEST["tabindex"] : 0;
//NLP and OCR variables
$spNlpId = array_key_exists('spnlpid', $_REQUEST) ? $_REQUEST['spnlpid'] : 0;
$procStatus = array_key_exists('procstatus', $_REQUEST) ? $_REQUEST['procstatus'] : 'unprocessed';
$specManager = new SpecProcessorManager();
$specManager->setCollId($collid);
$isEditor = false;
if ($isAdmin || array_key_exists("CollAdmin", $userRights) && in_array($collid, $userRights["CollAdmin"])) {
$isEditor = true;
}
$statusStr = "";
?>
<html>
<head>
<title>Specimen Processor Control Panel</title>
<link href="<?php
echo $clientRoot;
?>
/css/base.css?<?php
echo $CSS_VERSION;
<?php
include_once '../../config/symbini.php';
include_once $serverRoot . '/classes/SpecProcessorManager.php';
include_once $serverRoot . '/classes/SpecProcNlpBryophyte.php';
include_once $serverRoot . '/classes/SpecProcNlpLichen.php';
include_once $serverRoot . '/classes/SpecProcNlpSalix.php';
header("Content-Type: text/html; charset=" . $charset);
if (!$SYMB_UID) {
header('Location: ../../profile/index.php?refurl=../collections/specprocessor/index.php?' . $_SERVER['QUERY_STRING']);
}
$collid = $_REQUEST['collid'];
$parserTarget = $_REQUEST['parser'];
$action = array_key_exists('formsubmit', $_REQUEST) ? $_REQUEST['formsubmit'] : '';
$procManager = new SpecProcessorManager();
$procManager->setCollId($collid);
$nlpManager = null;
if ($parserTarget == 'lbcc') {
$nlpManager = new SpecProcNlpLbcc();
} else {
$nlpManager = new SpecProcNlpSalix();
}
//$nlpManager->setCollId($collid);
$isEditor = false;
if ($isAdmin || array_key_exists("CollAdmin", $userRights) && in_array($collid, $userRights["CollAdmin"])) {
$isEditor = true;
}
$status = "";
if ($isEditor) {
if ($action == '') {
//$status = $nlpManager->addProfile($_REQUEST);
<?php
include_once '../../config/symbini.php';
include_once $serverRoot . '/classes/SpecProcessorManager.php';
header("Content-Type: text/html; charset=" . $charset);
if (!$SYMB_UID) {
header('Location: ../../profile/index.php?refurl=../collections/specprocessor/index.php?' . $_SERVER['QUERY_STRING']);
}
$collid = $_REQUEST['collid'];
$menu = array_key_exists('menu', $_REQUEST) ? $_REQUEST['menu'] : '';
$tabIndex = 4;
$procManager = new SpecProcessorManager();
$procManager->setCollId($collid);
$isEditor = false;
if ($IS_ADMIN || array_key_exists("CollAdmin", $userRights) && in_array($collid, $userRights["CollAdmin"])) {
$isEditor = true;
}
?>
<div id="innertext">
<div style="float:right;width:165px;">
<fieldset>
<legend><b>Sub-Menu</b></legend>
<ul>
<li><a href="index.php?tabindex=<?php
echo $tabIndex . '&collid=' . $collid;
?>
">General Stats</a><br/></li>
<li><a href="index.php?menu=user&tabindex=<?php
echo $tabIndex . '&collid=' . $collid;
?>
">User Stats</a><br/></li>
if (!is_numeric($spprId)) {
$spprId = 0;
}
if (!is_numeric($spNlpId)) {
$spNlpId = 0;
}
if ($procStatus && !preg_match('/^[a-zA-Z]+$/', $procStatus)) {
$procStatus = '';
}
if (!is_numeric($displayMode)) {
$displayMode = 0;
}
if (!is_numeric($tabIndex)) {
$tabIndex = 0;
}
$specManager = new SpecProcessorManager();
$specManager->setCollId($collid);
$isEditor = false;
if ($isAdmin || array_key_exists("CollAdmin", $userRights) && in_array($collid, $userRights["CollAdmin"])) {
$isEditor = true;
}
$statusStr = "";
if ($isEditor) {
if ($action == 'Add New Profile') {
$specManager->addProject($_POST);
} elseif ($action == 'Save Profile') {
$specManager->editProject($_POST);
} elseif ($action == 'Delete Profile') {
$specManager->deleteProject($_POST['sppriddel']);
} elseif ($action == 'Add to Queue') {
$csManager = new OccurrenceCrowdSource();
<?php
include_once '../../config/symbini.php';
include_once $serverRoot . '/classes/SpecProcessorManager.php';
header("Content-Type: text/html; charset=" . $charset);
$collid = array_key_exists('collid', $_REQUEST) ? $_REQUEST['collid'] : 0;
$spprid = array_key_exists('spprid', $_REQUEST) ? $_REQUEST['spprid'] : 0;
$procStatus = array_key_exists('procstatus', $_REQUEST) ? $_REQUEST['procstatus'] : 'unprocessed';
$procManager = new SpecProcessorManager();
$procManager->setCollId($collid);
$procManager->setProjVariables('OCR Harvest');
?>
<script>
$(function() {
var dialogArr = new Array("speckeypattern","sourcepath","ocrfile","ocrsource");
var dialogStr = "";
for(i=0;i<dialogArr.length;i++){
dialogStr = dialogArr[i]+"info";
$( "#"+dialogStr+"dialog" ).dialog({
autoOpen: false,
modal: true,
position: { my: "left top", at: "right bottom", of: "#"+dialogStr }
});
$( "#"+dialogStr ).click(function() {
$( "#"+this.id+"dialog" ).dialog( "open" );
});
}
});
<?php
include_once '../../config/symbini.php';
include_once $SERVER_ROOT . '/classes/SpecProcessorManager.php';
header("Content-Type: text/html; charset=" . $CHARSET);
if (!$SYMB_UID) {
header('Location: ../../profile/index.php?refurl=' . $CLIENT_ROOT . '/collections/specprocessor/index.php?' . $_SERVER['QUERY_STRING']);
}
$action = array_key_exists('submitaction', $_REQUEST) ? $_REQUEST['submitaction'] : '';
$collId = array_key_exists('collid', $_REQUEST) ? $_REQUEST['collid'] : 0;
$spprId = array_key_exists('spprid', $_REQUEST) ? $_REQUEST['spprid'] : 0;
$specManager = new SpecProcessorManager();
$specManager->setCollId($collId);
$editable = false;
if ($IS_ADMIN || array_key_exists("CollAdmin", $userRights) && in_array($collId, $userRights["CollAdmin"])) {
$editable = true;
}
$specProjects = array();
if (!$spprId && $action != 'addmode') {
//If there is one image loading profile, and only one, linked to the collection, pull that up as the default project
$specProjects = $specManager->getProjects();
if (count($specProjects) == 1) {
$arrayKeys = array_keys($specProjects);
$spprId = array_shift($arrayKeys);
}
}
if ($spprId) {
$specManager->setProjVariables($spprId);
}
?>
<html>
<?php
require_once "TcnImageConfig.php";
require_once "DbConnection.php";
//-------------------------------------------------------------------------------------------//
//End of variable assignment. Don't modify code below.
date_default_timezone_set('America/Phoenix');
$specManager = new SpecProcessorManager($dbMetadata);
//Set variables
$specManager->setCollArr($collArr);
$specManager->setDbMetadata($dbMetadata);
$specManager->setSourcePathBase($sourcePathBase);
$specManager->setTargetPathBase($targetPathBase);
$specManager->setImgUrlBase($imgUrlBase);
$specManager->setWebPixWidth($webPixWidth);
$specManager->setTnPixWidth($tnPixWidth);
$specManager->setLgPixWidth($lgPixWidth);
$specManager->setJpgCompression($jpgCompression);
$specManager->setUseImageMagick($useImageMagick);
$specManager->setCreateTnImg($createTnImg);
$specManager->setCreateLgImg($createLgImg);
$specManager->setKeepOrig($keepOrig);
$specManager->setCreateNewRec($createNewRec);
$specManager->setCopyOverImg($copyOverImg);
$specManager->setLogPath($logPath);
$specManager->setSilent($silent);
//Run process
$specManager->batchLoadImages();
class SpecProcessorManager
{
private $conn;
