function loadWorkflowPools()
{
module_load_include('php', 'apiary_project', 'workflow/include/class.Object_Pool');
$this->object_pool = new Object_Pool($this->object_pool_id);
$specimens = array();
$images = array();
$rois = array();
$specimen_pids = array();
$image_pids = array();
$roi_pids = array();
$queued_image_pids = array();
$queued_roi_pids = array();
$workflow_pids = array();
$workflow_dom = new DOMDocument('1.0', 'iso-8859-1');
$workflowElement = $workflow_dom->createElement('workflow', '');
//rootElement
$workflow_dom->appendChild($workflowElement);
//$time_start = $this->microtime_float();
include_once drupal_get_path('module', 'apiary_project') . '/workflow/include/search.php';
$solr_search = new search();
foreach ($this->object_pool->object_pool_pids as $pid) {
switch ($pid) {
case strpos($pid, 'ap-specimen:') > -1:
$specimenElement = $workflow_dom->createElement("specimen");
$specimen_pidElement = $workflow_dom->createElement("pid", $pid);
$specimenElement->appendChild($specimen_pidElement);
array_push($specimen_pids, $pid);
array_push($workflow_pids, $pid);
$specimen['pid'] = $pid;
if ($this->fill_fedora) {
$specimenMetadata = AP_Specimen::getspecimenMetadata_record($pid);
$specimen['specimenMetadata'] = $specimenMetadata;
}
$specimen_images = AP_Specimen::getImageListForSpecimen($pid);
//$specimen['images'] = $specimen_images;
if (sizeOf($specimen_images) > 0) {
foreach ($specimen_images as $image_pid) {
$image = array();
$image['pid'] = $image_pid;
$imageElement = $workflow_dom->createElement("image");
$image_pidElement = $workflow_dom->createElement("pid", $image_pid);
$imageElement->appendChild($image_pidElement);
$this->addSolrIndexItems($solr_search, $image_pid, $workflow_dom, $imageElement);
if ($this->canAnalyzeSpecimen || $this->canQC) {
array_push($image_pids, $image_pid);
array_push($workflow_pids, $image_pid);
}
$specimen_image_rois = AP_Image::getROIListForImage($image_pid);
$image['rois'] = $specimen_image_rois;
$specimen['rois'] .= $specimen_image_rois;
if (sizeOf($specimen_image_rois) > 0) {
foreach ($specimen_image_rois as $roi_pid) {
$roiElement = $workflow_dom->createElement("roi");
$roi_pidElement = $workflow_dom->createElement("pid", $roi_pid);
$roiElement->appendChild($roi_pidElement);
$this->addSolrIndexItems($solr_search, $roi_pid, $workflow_dom, $roiElement);
array_push($roi_pids, $roi_pid);
array_push($workflow_pids, $roi_pid);
$imageElement->appendChild($roiElement);
}
}
// $specimen['images'] .= $specimen_images;
$specimenElement->appendChild($imageElement);
}
}
array_push($specimens, $specimen);
$workflowElement->appendChild($specimenElement);
break;
case strpos($pid, 'ap-image:') > -1:
//see if already loaded
array_push($image_pids, $pid);
array_push($workflow_pids, $pid);
break;
case strpos($pid, 'ap-roi:') > -1:
//see if already loaded
array_push($roi_pids, $pid);
array_push($workflow_pids, $pid);
break;
}
}
//echo "Session_ID = ".$_SESSION['apiary_session_id']."<br>\n";
//echo $workflow_dom->saveXML()."<br>\n";
//$time_end = $this->microtime_float();
//$time = $time_end - $time_start;
//echo "Did it in $time seconds\n";
$this->workflow_dom = $workflow_dom;
//echo $workflow_dom->saveXML();
$this->specimens = $specimens;
$this->specimen_pids = $specimen_pids;
$this->image_pids = $image_pids;
//$this->queued_image_pids = $queued_image_pids;
$this->roi_pids = $roi_pids;
//$this->queued_roi_pids = $queued_roi_pids;
$this->workflow_pool = $workflow_pids;
}
function get_roi_boxes($image_pid, $nothing, $workflow_id)
{
global $user;
$returnBoxes = "";
if (Workflow_Users::doesWorkflowHaveUserName($workflow_id, $user->name) && Workflow_Permission::doesWorkflowHavePermission($workflow_id, "canAnalyzeSpecimen")) {
$roi_pids = AP_Image::getROIListForImage($image_pid);
foreach ($roi_pids as $roi_pid) {
$roiMetadata_record = AP_ROI::getroiMetadata_record($roi_pid);
$returnBoxes[] = array("y" => $roiMetadata_record['y'], "h" => $roiMetadata_record['h'], "x" => $roiMetadata_record['x'], "w" => $roiMetadata_record['w'], "type" => $roiMetadata_record['roiType'], "pid" => $roi_pid);
}
echo json_encode($returnBoxes);
} else {
http_send_status(401);
echo "You do not have sufficient permission";
}
}
function add_next_image_with_rois_to_queue($workflow_id)
{
$timeout = date("YmdHis", strtotime('now') - 1800);
$workflow = new Workflow($workflow_id, true);
$workflow_dom = $workflow->workflow_dom;
$image_pids = $workflow->image_pids;
$totalEntries = sizeOf($image_pids);
$specimen_elements = $workflow_dom->getElementsByTagName('specimen');
foreach ($specimen_elements as $specimen) {
$specimen_pid = $specimen->getElementsByTagName('pid')->item(0)->nodeValue;
$specimen_image_elements = $specimen->getElementsByTagName('image');
foreach ($specimen_image_elements as $image) {
$image_pid = $image->getElementsByTagName('pid')->item(0)->nodeValue;
$status_dom = AP_Image::getImageStatusDom($image_pid);
if ($status_dom != false && ($status_dom->getElementsByTagName('locked')->item(0)->nodeValue == "false" || $status_dom->getElementsByTagName('locked_time')->item(0)->nodeValue < $timeout)) {
$status_dom = AP_Image::getImageLock($image_pid);
$analyzedStatus = $status_dom->getElementsByTagName('analyzedStatus')->item(0)->nodeValue;
$locked_by = $status_dom->getElementsByTagName('locked_by')->item(0)->nodeValue;
$locked = $status_dom->getElementsByTagName('locked')->item(0)->nodeValue;
$locked_time = $status_dom->getElementsByTagName('locked_time')->item(0)->nodeValue;
$locked_session = $status_dom->getElementsByTagName('locked_session')->item(0)->nodeValue;
$workflow_status = workflow_status($locked, $locked_time, $locked_session);
$roi_pids = AP_Image::getROIListForImage($image_pid);
$roi_count = sizeOf($roi_pids);
$queue_item_html .= create_queue_list_image($image_pid, $specimen_pid, $analyzedStatus, $roi_count, $locked_by, $workflow_status, $workflow_id);
//$queue_item_html .= '<div class="widget-content" id="content-'.str_replace(':', '__', $image_pid).'">'."\n";
$found_queued_roi = false;
foreach ($roi_pids as $roi_pid) {
$roi_status_dom = AP_ROI::getROILock($roi_pid);
if ($roi_status_dom != false) {
if (!$found_queued_roi) {
$queue_item_html .= '<div class="widget-content" id="content-' . str_replace(':', '__', $image_pid) . '">' . "\n";
$found_queued_roi = true;
}
$transcribedStatus = $roi_status_dom->getElementsByTagName('transcribedStatus')->item(0)->nodeValue;
$parsedL1Status = $roi_status_dom->getElementsByTagName('parsedL1Status')->item(0)->nodeValue;
$locked_by = $roi_status_dom->getElementsByTagName('locked_by')->item(0)->nodeValue;
$locked = $roi_status_dom->getElementsByTagName('locked')->item(0)->nodeValue;
$locked_time = $roi_status_dom->getElementsByTagName('locked_time')->item(0)->nodeValue;
$locked_session = $roi_status_dom->getElementsByTagName('locked_session')->item(0)->nodeValue;
$workflow_status = workflow_status($locked, $locked_time, $locked_session);
$queue_item_html .= create_queue_list_roi($roi_pid, $image_pid, $transcribedStatus, $parsedL1Status, $locked_by, $workflow_status, $workflow_id);
}
}
if ($found_queued_roi) {
$queue_item_html .= '</div><!-- widget-content -->' . "\n";
}
break 2;
}
}
}
echo $queue_item_html;
}
