function getRecords($from, $pageSize = 1000, $start = 0, $dataSource = 'AVH')
{
$ci =& get_instance();
$ci->load->helper('curl');
$ci->load->helper('ala_ws');
$ci->load->model('mapmodel');
$url = "http://biocache.ala.org.au/ws/occurrences/search";
if ($from == 'all' || $from == '*') {
$startDate = '*';
} else {
$startDate = $from . 'T00:00:00Z';
}
$intro = array(NULL => '-(establishment_means:"not native" OR establishment_means:cultivated OR establishment_means:"presumably cultivated" OR establishment_means:"possibly cultivated" OR establishment_means:"doubtfully native")', 'introduced' => '(establishment_means:"not native" OR establishment_means:"doubtfully native")', 'cultivated' => '(establishment_means:cultivated OR establishment_means:"presumably cultivated" OR establishment_means:"possibly cultivated")');
$totalRecords = 0;
foreach ($intro as $key => $value) {
$startIndex = $start;
$recordCount = $start + 1;
while ($startIndex < $recordCount) {
$params = array();
$params['fq'] = array();
$params['fq']['data_hub_uid'] = 'dh2';
$params['fq']['state'] = 'Victoria';
$params['fq']['latitude'] = '[* TO *]';
$params['fq']['longitude'] = '[* TO *]';
$params['fq'][] = $value;
$params['fq']['last_load_date'] = '[' . $startDate . ' TO *]';
$params['fl'] = array('id', 'taxon_concept_lsid', 'genus_guid', 'species_guid', 'rank', 'genus', 'species', 'raw_taxon_name', 'catalogue_number', 'taxon_name', 'latitude', 'longitude', 'kingdom', 'phylum', 'class', 'order', 'family');
$params['facet'] = 'off';
$params['pageSize'] = $pageSize;
$params['startIndex'] = $startIndex;
$query = createQueryString('biocache_search', $params);
$result = doCurl($query, FALSE, TRUE);
if ($result) {
$recordCount = $ci->mapmodel->loadAvhData($result, $key);
}
$startIndex += $pageSize;
if ($ci->input->is_cli_request()) {
if ($startIndex < $recordCount) {
echo $startIndex . ' of ' . $recordCount . PHP_EOL;
} else {
echo $recordCount . ' of ' . $recordCount . PHP_EOL;
}
}
}
$totalRecords += $recordCount;
}
return $totalRecords;
}
private function getTaxaForState($state)
{
$params = array();
$params['fq'] = array();
$params['fq']['data_hub_uid'] = 'dh2';
$params['fq']['class'] = 'Equisetopsida';
$params['fq']['state'] = '"' . $state . '"';
$params['fq'][] = '(rank:species OR rank:subspecies OR rank:variety OR rank:form)';
$params['pageSize'] = 1;
$params['facets'] = 'taxon_name';
$params['flimit'] = 100000;
$query = createQueryString('biocache_search', $params);
$result = doCurl($query, FALSE, TRUE);
$data = json_decode($result);
$facets = $data->facetResults;
$taxa = array();
foreach ($facets[0]->fieldResult as $facet) {
$taxa[] = $facet->label;
}
return $taxa;
}
/** Tries to build a good URL for this entry. The URL should be absolute (better for the generated RSS) */
function getURL()
{
if (defined('BIBTEXBROWSER_URL_BUILDER')) {
$f = BIBTEXBROWSER_URL_BUILDER;
return $f($this);
}
// echo $this->filename;
// echo $this->getKey();
return BIBTEXBROWSER_URL . '?' . createQueryString(array(Q_KEY => $this->getKey(), Q_FILE => $this->filename));
}
<body>
<?php
//set the timezone, otherwise mktime and friends have a hissy
date_default_timezone_set('UTC');
//set up some options, either from the passed in values, or if missing, their default values
$databaseFilename = '/var/www/monkeybot/monkey.db';
$search = isset($_GET['search']) ? $_GET['search'] : '';
$new = isset($_GET['new']) ? $_GET['new'] : '=0';
$added = isset($_GET['added']) ? $_GET['added'] : 'All';
$action = isset($_GET['action']) ? $_GET['action'] : 'All';
$remove = isset($_GET['remove']) ? $_GET['remove'] : '';
unset($_GET['remove']);
//we don't want this variable to persist past this one-time use
$thisPage = createQueryString();
//set up some filter options
$addedOptions = array('All', 'Today', 'Yesterday');
$newOptions = array('=0', '<5', '<10', '<100', 'All');
//some of the HTML generated, ick
$filterTableHeader = '<table class="filter">' . '<caption>Filter</caption>' . '<thead><tr>' . '<th>Added</th><th>Category</th><th>ShowCount</th><th>Search</th><th></th>' . '</tr></thead>' . '<tbody>';
$filterTableFooter = '</tbody>' . '</table>';
$resultTableHeader = '<table class="results">' . '<caption>Results</caption>' . '<thead><tr>' . '<th>ID</th><th>Added</th><th>Category</th><th>Contents</th><th>Delete</th><th>ShowCount</th>' . '</tr></thead>' . '<tbody>';
$resultTableFooter = '</tbody>' . '</table>';
function createQueryString($array = array(), $kvSep = '=', $varSep = '&')
{
$get = array_merge($_GET, $array);
$getVars = array();
foreach ($get as $key => $value) {
if (is_string($key)) {
$getVars[] = implode($kvSep, array($key, $value));
/** overrides */
function getRSS()
{
return BIBTEXBROWSER_URL . '?' . createQueryString($this->filter) . '&rss';
}
private function queryBiocache($startDate, $pageSize, $startIndex, $establishmentMeans)
{
$params = array();
$params['fq'] = array();
$params['fq']['data_hub_uid'] = 'dh2';
$params['fq']['state'] = 'Victoria';
$params['fq']['latitude'] = '[* TO *]';
$params['fq']['longitude'] = '[* TO *]';
$params['fq']['-raw_identification_qualifier'] = '[* TO *]';
$params['fq'][] = $establishmentMeans;
$params['fq']['last_load_date'] = '[' . $startDate . ' TO *]';
$params['fl'] = array('id', 'taxon_concept_lsid', 'genus_guid', 'species_guid', 'rank', 'genus', 'species', 'raw_taxon_name', 'catalogue_number', 'taxon_name', 'latitude', 'longitude', 'kingdom', 'phylum', 'class', 'order', 'family');
$params['facet'] = 'off';
$params['pageSize'] = $pageSize;
$params['startIndex'] = $startIndex;
$query = createQueryString('biocache_search', $params);
$result = doCurl($query, FALSE, TRUE);
return $result;
}
