<?php require_once 'getNames.php'; $resultArray = getGeneList(); # jsonencore ajax the array back echo json_encode($resultArray); # DC from database database_disconnect();
<?php
error_reporting(E_ALL);
ini_set('display_errors', '1');
require_once 'mysql.php';
require_once 'search_chemicalDatabase.php';
require_once 'getNames.php';
require_once 'getDatabaseIDs.php';
// $_POST['query'] contains the raw query here, split it process it boil it salt it serve it
$queryString = trim(strtoupper($_POST['query']), " \t,");
$queryString = preg_replace('/;\\s+/', ';', $queryString);
$queryString = preg_replace('/\\s+;/', ';', $queryString);
$query = explode(";", $queryString);
// Find where chemicals, genes and GOterms are in Query
$chemicals = array_safe(array_intersect($query, array_map('strtoupper', getChemicalList())));
$genes = array_safe(array_intersect($query, array_map('strtoupper', getGeneList())));
$GOterms = array_safe(array_intersect($query, array_map('strtoupper', getGOList())));
$databaseIDs_chemicals = getChemicalDatabaseIDs($chemicals);
$databaseIDs_genes = getGeneDatabaseIDs($genes);
$databaseIDs_GOs = getGeneOntologyDatabaseIDs($GOterms);
$results = array(0 => search_info_chemicals($databaseIDs_chemicals), 1 => search_info_genes($databaseIDs_genes), 2 => search_info_GO_terms($databaseIDs_GOs));
//echo $queryString;
if ($queryString == "" || $queryString == "NAME OF CHEMICALS TO SEARCH GOES HERE, SEPARATED BY;") {
echo "NO_SEARCH";
} else {
if (count($chemicals) == 0 && count($genes) == 0 && count($GOterms) == 0) {
echo "INVALID_SEARCH";
} else {
if (count($results[0]) == 0 && count($results[1]) == 0 && count($results[2]) == 0) {
echo "EMPTY";
} else {
function getAllList()
{
$resultArray = array_merge(getGeneList(), getChemicalList(), getGOList());
return $resultArray;
}
