function debug_footer($db)
{
if ($_SESSION['debug'] > 0) {
debug_output();
debug(1);
echo "\n";
echo "###### System info ######\n";
echo file_get_contents('/proc/version');
echo "\n";
echo "system load:\t" . file_get_contents('/proc/loadavg');
echo "\n";
echo "HW platform:\t" . $_SESSION['hwplatform'] . " (" . $_SESSION['hwplatformid'] . ")\n";
echo "\n";
echo "playerID:\t" . $_SESSION['playerid'] . "\n";
echo "\n";
echo "\n";
echo "###### Audio backend ######\n";
echo file_get_contents('/proc/asound/version');
echo "\n";
echo "Card list: (/proc/asound/cards)\n";
echo "--------------------------------------------------\n";
echo file_get_contents('/proc/asound/cards');
echo "\n";
echo "ALSA interface #0: (/proc/asound/card0/pcm0p/info)\n";
echo "--------------------------------------------------\n";
echo file_get_contents('/proc/asound/card0/pcm0p/info');
echo "\n";
echo "ALSA interface #1: (/proc/asound/card1/pcm0p/info)\n";
echo "--------------------------------------------------\n";
echo file_get_contents('/proc/asound/card1/pcm0p/info');
echo "\n";
echo "interface #0 stream status: (/proc/asound/card0/stream0)\n";
echo "--------------------------------------------------------\n";
$streaminfo = file_get_contents('/proc/asound/card0/stream0');
if (empty($streaminfo)) {
echo "no stream present\n";
} else {
echo $streaminfo;
}
echo "\n";
echo "interface #1 stream status: (/proc/asound/card1/stream0)\n";
echo "--------------------------------------------------------\n";
$streaminfo = file_get_contents('/proc/asound/card1/stream0');
if (empty($streaminfo)) {
echo "no stream present\n";
} else {
echo $streaminfo;
}
echo "\n";
echo "\n";
echo "###### Kernel optimization parameters ######\n";
echo "\n";
echo "hardware platform:\t" . $_SESSION['hwplatform'] . "\n";
echo "current orionprofile:\t" . $_SESSION['orionprofile'] . "\n";
echo "\n";
// echo "kernel scheduler for mmcblk0:\t\t".((empty(file_get_contents('/sys/block/mmcblk0/queue/scheduler'))) ? "\n" : file_get_contents('/sys/block/mmcblk0/queue/scheduler'));
echo "kernel scheduler for mmcblk0:\t\t" . file_get_contents('/sys/block/mmcblk0/queue/scheduler');
echo "/proc/sys/vm/swappiness:\t\t" . file_get_contents('/proc/sys/vm/swappiness');
echo "/proc/sys/kernel/sched_latency_ns:\t" . file_get_contents('/proc/sys/kernel/sched_latency_ns');
echo "/proc/sys/kernel/sched_rt_period_us:\t" . file_get_contents('/proc/sys/kernel/sched_rt_period_us');
echo "/proc/sys/kernel/sched_rt_runtime_us:\t" . file_get_contents('/proc/sys/kernel/sched_rt_runtime_us');
echo "\n";
echo "\n";
echo "###### Filesystem mounts ######\n";
echo "\n";
echo file_get_contents('/proc/mounts');
echo "\n";
echo "\n";
echo "###### mpd.conf ######\n";
echo "\n";
echo file_get_contents('/etc/mpd.conf');
echo "\n";
}
if ($_SESSION['debug'] > 1) {
echo "\n";
echo "\n";
echo "###### PHP backend ######\n";
echo "\n";
echo "php version:\t" . phpVer() . "\n";
echo "debug level:\t" . $_SESSION['debug'] . "\n";
echo "\n";
echo "\n";
echo "###### SESSION ######\n";
echo "\n";
echo "STATUS:\t\t" . session_status() . "\n";
echo "ID:\t\t" . session_id() . "\n";
echo "SAVE PATH:\t" . session_save_path() . "\n";
echo "\n";
echo "\n";
echo "###### SESSION DATA ######\n";
echo "\n";
print_r($_SESSION);
}
if ($_SESSION['debug'] > 2) {
$connection = new pdo($db);
$querystr = "SELECT * FROM cfg_engine";
$data['cfg_engine'] = sdbquery($querystr, $connection);
$querystr = "SELECT * FROM cfg_lan";
$data['cfg_lan'] = sdbquery($querystr, $connection);
$querystr = "SELECT * FROM cfg_wifisec";
$data['cfg_wifisec'] = sdbquery($querystr, $connection);
$querystr = "SELECT * FROM cfg_mpd";
$data['cfg_mpd'] = sdbquery($querystr, $connection);
$querystr = "SELECT * FROM cfg_source";
$data['cfg_source'] = sdbquery($querystr, $connection);
$connection = null;
echo "\n";
echo "\n";
echo "###### SQLite datastore ######\n";
echo "\n";
echo "\n";
echo "### table CFG_ENGINE ###\n";
print_r($data['cfg_engine']);
echo "\n";
echo "\n";
echo "### table CFG_LAN ###\n";
print_r($data['cfg_lan']);
echo "\n";
echo "\n";
echo "### table CFG_WIFISEC ###\n";
print_r($data['cfg_wifisec']);
echo "\n";
echo "\n";
echo "### table CFG_SOURCE ###\n";
print_r($data['cfg_source']);
echo "\n";
echo "\n";
echo "### table CFG_MPD ###\n";
print_r($data['cfg_mpd']);
echo "\n";
}
if ($_SESSION['debug'] > 0) {
echo "\n";
printf("Page created in %.5f seconds.", microtime(true) - $_SERVER['REQUEST_TIME_FLOAT']);
echo "\n";
echo "\n";
}
}
if ($err != 0) {
$errorcount++;
}
// delete old molcfp record first
$qstr = "DELETE FROM {$molcfptable} WHERE mol_id = {$item_id}";
$result = mysql_query($qstr);
$err = mysql_errno();
if ($err != 0) {
$errorcount++;
}
}
}
echo "<h3>Done.</h3>\n";
}
if ($debug > 0) {
debug_output("Action finished with {$errorcount} errors.<br />\n");
}
$errorcount = 0;
echo "<p /><a href=\"{$myname}?db={$db_id}\">Continue</a>\n";
echo "</body></html>\n";
die;
}
function mk_inputline($iname, $idefault)
{
echo "<input type=\"text\" name=\"{$iname}\" size=\"106\" value=\"{$idefault}\">";
}
function mk_inputarea($iname, $idefault)
{
echo "<textarea name=\"{$iname}\" cols=\"80\" rows=\"4\">{$idefault}</textarea>\n";
}
function mk_inputselect($iname, $itype, $idefault)
if ($participant_id) {
participants__get_statistics($participant_id);
}
if ($settings['enable_email_module'] == 'y' && isset($_REQUEST['participant_id'])) {
$nums = email__get_privileges('participant', $_REQUEST, 'read', true);
if ($nums['allowed'] && $nums['num_all'] > 0) {
echo '<br><br><TABLE class="or_page_subtitle" style="background: ' . $color['page_subtitle_background'] . '; color: ' . $color['page_subtitle_textcolor'] . '; width: 90%">
<TR><TD align="left">
' . lang('emails') . '
</TD></TR></TABLE>';
echo javascript__email_popup();
$url_string = 'participant_id=' . $participant_id;
if ($hide_header) {
$url_string .= '&hide_header=true';
}
email__list_emails('participant', $_REQUEST['participant_id'], $nums['rmode'], $url_string, false);
}
}
echo "</CENTER>";
}
if ($hide_header) {
echo '<BR><BR><BR><BR>';
debug_output();
echo '</TD></TR><TABLE></center><BR>';
html__footer();
} else {
include "footer.php";
}
if ($hide_header) {
echo str_ireplace("href=", "target=\"_parent\" href=", ob_get_clean());
}
//echo "inner qstr: $qstr_i<br>";
$result3 = mysql_query($qstr_i) or die("Query failed! (4a_inner)");
while ($line3 = mysql_fetch_array($result3, MYSQL_ASSOC)) {
$total_cand++;
$rxn_id_i = $line3["rxn_id"];
//echo "inner loop candidate: $rxn_id_i<br>\n";
$qstr_struc = "SELECT struc, map FROM {$rxnstructable} WHERE rxn_id = {$rxn_id}";
$result2 = mysql_query($qstr_struc) or die("Query failed! (4a_struc)");
$line2 = mysql_fetch_row($result2);
$struc = $line2[0];
$struc = str_replace("\n", "\r\n", $struc);
$struc = str_replace("\r\r\n", "\r\n", $struc);
$map = $line2[1];
//echo "<pre>$struc</pre>";
if ($debug > 2) {
debug_output("***** match protocol for candidate {$db_id}:{$rxn_id}\n");
}
$total_cand_sum++;
$strucmatch = matchrxn($saferxn, $struc, $map, $options);
if ($strucmatch == TRUE) {
$hits++;
$hits_sum++;
if ($hits_sum > $maxhits) {
echo "</table>\n";
echo "<hr>There are more hits....<br>\n";
$hits_sum--;
$total_cand_sum--;
mk_continueform($db_id, $rxn_id, $nhits, $hitlist);
$pageonly = " on this page";
$endpage = false;
break 4;
function get_svgmode()
{
global $debug;
$dummy = getagent();
$ua_name = $dummy["name"];
$ua_ver = $dummy["version"];
#echo "more specifically: $ua_name, version $ua_ver<br>\n";
if ($debug > 0) {
debug_output("browser: {$ua_name}, version {$ua_ver}");
}
$svgmode = 0;
// default: SVG not supported
if ($ua_name === "MSIE" && $ua_ver >= 9) {
$svgmode = 1;
}
if ($ua_name === "Firefox" && $ua_ver >= 4) {
$svgmode = 1;
}
if ($ua_name === "Chrome" && $ua_ver >= 7) {
$svgmode = 1;
}
if ($ua_name === "Opera" && $ua_ver >= 8) {
$svgmode = 2;
}
// ?? inline SVG since 11.6
if ($ua_name === "Opera" && $ua_ver >= 11.6) {
$svgmode = 1;
}
// ?? inline SVG since 11.6
if ($ua_name === "Safari" && $ua_ver >= 500) {
$svgmode = 2;
}
// ?? inline SVG since 5.1
if ($ua_name === "Safari" && $ua_ver >= 510) {
$svgmode = 1;
}
// ?? inline SVG since 5.1
// currently, display of _scaled_ external SVGs does not work properly, so disable mode 2
if ($svgmode == 2) {
$svgmode = 0;
}
return $svgmode;
}
function GroupCalendarParse($lua_data, $only_realm = "")
{
global $debuging_flag;
$calendar_items = array();
$count = 0;
if (!array_key_exists("gGroupCalendar_Database", $lua_data)) {
if ($debuging_flag) {
debug_output("\n\nERROR: No Calendar Database key found in LUA Data.\n\n");
}
return array();
}
$database = $lua_data['gGroupCalendar_Database'];
if ($debuging_flag) {
debug_output("Database Format is " . $database['Format'] . "\n");
}
if ($debuging_flag && $database['Format'] != 14) {
debug_output("WARNING: Expecting Format 14, possible errors from different format versions. Continuing anyway...\n");
}
$gd = $database['Databases'];
foreach (array_keys($gd) as $char_name) {
//get char name that posted the event
$charName = $gd[$char_name]['UserName'];
$realm = $gd[$char_name]['Realm'];
if ($only_realm != "" && $realm != $only_realm) {
if ($debuging_flag) {
debug_output("Entry {$char_name} is being skipped because the realm '{$realm}' does not meet required realm of '{$only_realm}'.\n");
}
continue;
}
$events = $gd[$char_name]['Events'];
if ($debuging_flag == 2) {
debug_output("{$char_name} Events ");
debug_output(print_r($events, 1));
}
foreach (array_keys($events) as $event) {
if ($debuging_flag == 2) {
debug_output("Event {$event}\n");
}
$detail = $events[$event];
foreach (array_keys($detail) as $detailinfo) {
$thisEvent = array();
$detailedinfo = $detail[$detailinfo];
if ($debuging_flag == 2) {
debug_output(print_r($detailedinfo, 1));
}
// the 'mPrivate' field will signify if this event is private and shouldn't be uploaded
if ($detailedinfo['mPrivate'] == "true") {
continue;
}
$mDate = $detailedinfo['mDate'];
$mTitle = $detailedinfo['mTitle'];
$mType = $detailedinfo['mType'];
$mID = $detailedinfo['mID'];
$mTime = $detailedinfo['mTime'];
$mGuildOnly = $detailedinfo['mGuild'];
$mDescription = $detailedinfo['mDescription'];
$mDuration = $detailedinfo['mDuration'];
$mMinLevel = $detailedinfo['mMinLevel'];
$mMaxLevel = $detailedinfo['mMaxLevel'];
$mAttendance = $detailedinfo['mAttendance'];
$mLimits = $detailedinfo['mLimits'];
$mMaxAttendance = $detailedinfo['mLimits']['mMaxAttendance'];
//Convert GroupCal Date to Calendar date
$startdate = mktime(12, 0, 0, 1, 1, 2000);
$mDateConv = $startdate + $mDate * 86400;
$eventDate = getdate($mDateConv);
//Convert GroupCal Time to Standard Time
$eventTime = $mTime / 60;
if ($decpos = strpos($eventTime, '.')) {
$eventTimeH = substr($eventTime, 0, $decpos);
$eventTimeM = substr($eventTime, $decpos);
$eventTimeM = 60 * $eventTimeM;
$eventTimeS = 0;
if ($eventTimeM > 0 && $eventTimeM < 10) {
$eventTimeM = 05;
}
} else {
$eventTimeH = $eventTime;
$eventTimeM = 0;
$eventTimeS = 0;
}
//Calculate Duration (leave it in minutes)
$duration = (int) $mDuration;
if ($debuging_flag == 2) {
print "Title: {$mTitle}<br />Date: {$mDate} Time: {$mTime}<br />\n";
}
if ($debuging_flag == 2) {
print "Initial Date found to be {$eventTimeH}:{$eventTimeM}:{$eventTimeS} " . $eventDate['mon'] . "/" . $eventDate['mday'] . "/" . $eventDate['year'] . "<br />\n";
}
//check event type for b-day and set time to be allday event
if ($mType == 'Birth') {
$eventTimeS = 25;
$eventTimeH = 0;
$eventTimeM = 0;
$duration = 0;
} else {
$eventTimeS = $eventTimeS - WOW_TIME_OFFSET * 3600;
}
//Not a birthday, so add the Server Time Offset to store it in GMT
//Calculate the Unix Date using the vars we have gotten from our data.
$date = mktime($eventTimeH, $eventTimeM, $eventTimeS, $eventDate['mon'], $eventDate['mday'], $eventDate['year']);
if ($debuging_flag == 2) {
print "GMT Date found to be " . date("r", $date) . "<br />\n";
}
//Parse the attendace information.
$fAttendance = "";
if (is_array($mAttendance)) {
$fAttendance = array();
//Check for People whom will attend the event.
$attenCount = 0;
foreach (array_keys($mAttendance) as $attendees) {
$currAttend = explode(",", $mAttendance[$attendees]);
//$currAttend = array(modified date,modified time,status,playerinfo,attend_comment,guild,guild rank,create date,create time)
// playerinfo is string of 4 characters: first one is Race, second one is Class, last two are level
$fAttendance[$attenCount]['Name'] = $attendees;
$fAttendance[$attenCount]['str'] = $mAttendance[$attendees];
$fAttendance[$attenCount]['modDate'] = $currAttend[0];
$fAttendance[$attenCount]['modTime'] = $currAttend[1];
$fAttendance[$attenCount]['Status'] = $currAttend[2];
$fAttendance[$attenCount]['Level'] = substr($currAttend[3], 2, 2);
$fAttendance[$attenCount]['RaceCode'] = substr($currAttend[3], 0, 1);
$fAttendance[$attenCount]['ClassCode'] = substr($currAttend[3], 1, 1);
$fAttendance[$attenCount]['Comment'] = $currAttend[4];
$fAttendance[$attenCount]['Guild'] = $currAttend[5];
$fAttendance[$attenCount]['GuildRank'] = $currAttend[6];
$fAttendance[$attenCount]['createDate'] = $currAttend[7];
$fAttendance[$attenCount]['createTime'] = $currAttend[8];
//Convert GroupCal Time and Date to Gregorian Calendar date GMT timezone
// Time is stored is seconds since midnight
$startdate = mktime(12, 0, 0, 1, 1, 2000);
if ($fAttendance[$attenCount]['modDate'] != "") {
$mDateConv = $startdate + $fAttendance[$attenCount]['modDate'] * 86400;
$modDate = getdate($mDateConv);
$eventTimeS = $fAttendance[$attenCount]['modTime'] % 60;
$eventTimeH = floor($fAttendance[$attenCount]['modTime'] / 60);
$eventTimeM = $eventTimeH % 60;
$eventTimeH = floor($eventTimeH / 60);
$modDate = mktime($eventTimeH, $eventTimeM, $eventTimeS, $modDate['mon'], $modDate['mday'], $modDate['year']);
$modDate = $modDate - WOW_TIME_OFFSET * 3600;
$fAttendance[$attenCount]['modDate'] = date("Y-m-d", $modDate);
$fAttendance[$attenCount]['modTime'] = date("H:i:s", $modDate);
}
if ($fAttendance[$attenCount]['createDate'] != "") {
$mDateConv = $startdate + $fAttendance[$attenCount]['createDate'] * 86400;
$modDate = getdate($mDateConv);
$eventTimeS = $fAttendance[$attenCount]['createTime'] % 60;
$eventTimeH = floor($fAttendance[$attenCount]['createTime'] / 60);
$eventTimeM = $eventTimeH % 60;
$eventTimeH = floor($eventTimeH / 60);
$modDate = mktime($eventTimeH, $eventTimeM, $eventTimeS, $modDate['mon'], $modDate['mday'], $modDate['year']);
$modDate = $modDate - WOW_TIME_OFFSET * 3600;
$fAttendance[$attenCount]['createDate'] = date("Y-m-d", $modDate);
$fAttendance[$attenCount]['createTime'] = date("H:i:s", $modDate);
}
//Increment and ready for next loop
$attenCount++;
if ($debuging_flag == 2) {
debug_output('<br>' . $name . ' ' . $status . ' ' . $level . ' ' . Race($raceCode) . ' ' . ClassInt($classCode) . ' ' . $guild);
}
}
}
$fAttendLimits = $mLimits['mClassLimits'];
$thisEvent['Creator'] = $charName;
$thisEvent['DateTime'] = $date;
$thisEvent['Title'] = $mTitle;
$thisEvent['Type'] = $mType;
$thisEvent['ID'] = $mID;
$thisEvent['description'] = $mDescription;
$thisEvent['GuildOnly'] = $mGuildOnly;
$thisEvent['Duration'] = $duration;
$thisEvent['MinLevel'] = $mMinLevel;
$thisEvent['MaxLevel'] = $mMaxLevel;
$thisEvent['Attendance'] = $fAttendance;
$thisEvent['Limits'] = $fAttendLimits;
$thisEvent['MaxAttendance'] = $mMaxAttendance;
$calendar_items[$charName . $mID] = $thisEvent;
}
}
}
return $calendar_items;
}
function EC2_DescribeVolumes($creds)
{
$zabbix_name = $creds['zabbix_name'];
$xml_object = exec_ec2_query($creds, 'DescribeVolumes');
debug_output(__FILE__ . ':' . __FUNCTION__ . ':' . __LINE__ . ':' . "HTTP result received from EC2 for DescribeVolumes = " . var_export($xml_object, true));
// Initialize counters
$volume_status_array = array("creating" => array("Volumes_Status_creating" => 0, "Volumes_Status_creating_Total_Size_GB" => 0), "available" => array("Volumes_Status_available" => 0, "Volumes_Status_available_Total_Size_GB" => 0), "other" => array("Volumes_Status_other" => 0, "Volumes_Status_other_Total_Size_GB" => 0));
$volume_attachment_status_array = array("attaching" => array("Volumes_attaching" => 0, "Volumes_attaching_Total_Size_GB" => 0), "attached" => array("Volumes_attached" => 0, "Volumes_attached_Total_Size_GB" => 0), "detaching" => array("Volumes_detaching" => 0, "Volumes_detaching_Total_Size_GB" => 0), "detached" => array("Volumes_detached" => 0, "Volumes_detached_Total_Size_GB" => 0));
// A successful query to the EC2 API will have one or more
// volumeSets - so iterate through that.
// Each volumeSet in turn will have zero, one or more
// items containing a volume with volumeId.
foreach ($xml_object->volumeSet as $volumeSet) {
if (empty($volumeSet)) {
break;
}
foreach ($volumeSet->item as $volumeId) {
$volume_status = $volumeId->status;
$volume_size = $volumeId->size;
switch ($volume_status) {
case "creating":
break;
case "available":
break;
default:
$volume_status = "other";
break;
}
$volume_status_array["{$volume_status}"]["Volumes_Status_{$volume_status}"]++;
$volume_status_array["{$volume_status}"]["Volumes_Status_{$volume_status}_Total_Size_GB"] += $volume_size;
foreach ($volumeId->attachmentSet as $attachmentSet) {
if (empty($volumeSet)) {
break;
}
$attachment_status = $attachmentSet->item->status;
$volume_attachment_status_array["{$attachment_status}"]["Volumes_{$attachment_status}"]++;
$volume_attachment_status_array["{$attachment_status}"]["total_{$attachment_status}_Total_Size_GB"] += $volume_size;
}
}
}
// Print all the data so that it can be sent to Zabbix
foreach ($volume_status_array as $volume_status => $volume_status_data_array) {
foreach ($volume_status_data_array as $key => $value) {
write_to_data_file("{$zabbix_name} {$key} {$value}");
}
}
foreach ($volume_attachment_status_array as $volume_attachment_status => $volume_attachment_status_data_array) {
foreach ($volume_attachment_status_data_array as $key => $value) {
write_to_data_file("{$zabbix_name} {$key} {$value}");
}
}
}
</head>
<body>
<div class="container">
<div class="row">
<div class="col-md-12 col-xm-12">
<?php
show_header($myname, $dbstr);
?>
</div>
</div>
</div>
<?php
if ($debug > 0) {
debug_output("MolDB6, OS type {$ostype}");
}
$mode = $defaultmode;
//show_header($myname,$dbstr);
$ndb = get_numdb_readable();
if ($ndb == 0) {
echo "<h3>no data collection available</h3><br>\n</body>\n</html>\n";
die;
}
echo "<h2><span style=\"color:Purple\">{$sitename}</span></h2>\n";
$jmemol = "";
if (strlen($mol) > 10) {
$jmemol = tr4jme($mol);
}
//############################################################################################
$safemol = clean_molfile($mol);
/**
* Calls a function for every file in a folder.
*
* @author Vasil Rangelov a.k.a. boen_robot
*
* @param string $callback The function to call. It must accept one argument that is a relative filepath of the file.
* @param string $dir The directory to traverse.
* @param array $types The file types to call the function for. Leave as NULL to match all types.
* @param bool $recursive Whether to list subfolders as well.
* @param string $baseDir String to append at the beginning of every filepath that the callback will receive.
*/
function dir_walk($callback, $dir, $types = null, $ignore = null, $recursive = false, $baseDir = '')
{
$dir = rtrim($dir, '/');
debug_output("opening directory " . $dir, 0);
if ($dh = opendir($dir)) {
while (($file = readdir($dh)) !== false) {
if ($file === '.' || $file === '..') {
continue;
}
$continue = true;
if (isset($GLOBALS['ignore'])) {
foreach ($GLOBALS['ignore'] as $regex) {
$test = preg_match($regex, $file);
if ($test && count($test)) {
debug_output('found "' . $regex . '" skipping file ' . $file, 1);
$continue = false;
} elseif (preg_last_error()) {
debug_output('Bad regex "' . $regex . '" preg_last_error = ' . preg_error_output(preg_last_error()), 5);
}
}
}
if ($continue) {
$file_path = $dir . '/' . $file;
if (is_file($file_path)) {
debug_output('found file ' . $file_path, 0);
if (is_array($types)) {
$pathinfo = pathinfo($file_path, PATHINFO_EXTENSION);
debug_output($pathinfo, 0);
if (!in_array(strtolower($pathinfo), $types, true)) {
continue;
}
}
$callback($baseDir . $file);
} elseif ($recursive && is_dir($file_path)) {
dir_walk($callback, $file_path . DIRECTORY_SEPARATOR, $types, $ignore, $recursive, $baseDir . $file . DIRECTORY_SEPARATOR);
} else {
debug_output('doing nothing ' . $file_path);
}
}
}
closedir($dh);
} else {
echo "unable to open directory {$dir}\r\n";
}
debug_output("leaving directory " . $file, 0);
}
function matchmolrxn($qmol, $crxn, $options)
{
global $use_cmmmsrv;
global $ostype;
global $mmcmd;
global $debug;
$result = TRUE;
if (strlen($qmol) < 10 || strlen($crxn) < 20) {
$result = FALSE;
}
if ($result == TRUE) {
$result = FALSE;
if ($use_cmmmsrv == "y") {
$separator = "\$\$\$\$";
$lf = "\n";
} else {
$separator = "\\\$\\\$\\\$\\\$";
if ($ostype == 1) {
$lf = "\n";
}
// Linux
if ($ostype == 2) {
$lf = "\r\n";
}
// Windows
}
$allmol = array();
$allmol = explode("\$MOL\r\n", $crxn);
$header = $allmol[0];
$mol = array();
$mol = array_slice($allmol, 1);
$nmol = count($mol);
if ($debug > 4) {
debug_output("nmol: {$nmol}\n");
}
//============ now match
if ($nmol > 0) {
// assemble the SDF files to be passed to matchmol
$qmol = rtrim($qmol);
$sdf = $qmol . $lf . $separator . $lf;
for ($ic = 0; $ic < $nmol; $ic++) {
$cmol = rtrim($mol[$ic]);
$sdf .= $cmol . $lf . $separator . $lf;
}
// end for ($ic ...
if ($debug > 4) {
debug_output("{$sdf}\n");
}
if ($use_cmmmsrv == "y") {
$matchresult = filterthroughcmmm("{$sdf}", "#### matchmol:{$options}");
} else {
if ($ostype == 1) {
$matchresult = filterthroughcmd("{$sdf} ", "{$mmcmd}");
}
if ($ostype == 2) {
$sdf = str_replace("\r", "", $sdf);
// for Windows
$sdf = str_replace("\n", "\r\n", $sdf);
// for Windows
$matchresult = filterthroughcmd2("{$sdf} ", "{$mmcmd}");
}
}
//echo "<pre>match result:\n$matchresult\n</pre>";
$br = explode("\n", $matchresult);
$nr = count($br);
for ($ir = 0; $ir < $nr; $ir++) {
if (strpos($br[$ir], ":T") !== FALSE) {
$result = TRUE;
}
}
}
// end if ($nmol > 0)
}
// end if ($result == TRUE) from initial check
return $result;
}
