function matching_pages($publication, $year)
{
global $debug;
$pages = array();
$matches = array();
$matched = false;
// Parse citation
if (!$matched) {
//echo $publication;
if (preg_match('/(?<journal>.*)\\s+(?<volume>\\d+):\\s*(?<page>\\d+)\\.?$/Uu', $publication, $matches)) {
$matched = true;
}
}
if (!$matched) {
if (preg_match('/(?<journal>.*),\\s+(\\((?<series>.*)\\)\\s+)?(?<volume>\\d+),(\\s+\\((?<issue>\\d+)\\))?\\s+(?<page>\\d+)\\.$/Uu', $publication, $matches)) {
$matched = true;
}
}
if (!$matched) {
//echo $publication;
if (preg_match('/(?<journal>.*)\\s+(?<volume>\\d+):\\s*(?<page>\\d+)\\s+(?<year>[0-9]{4})/Uu', $publication, $matches)) {
$matched = true;
}
}
if (!$matched) {
if (preg_match('/(?<journal>.*),\\s+(?<volume>\\d+),\\s+(?<page>\\d+)\\.$/Uu', $publication, $matches)) {
$matched = true;
}
}
if (!$matched) {
if (preg_match('/(?<journal>.*),\\s+(?<volume>\\d+),\\s+(?<page>\\d+)/Uu', $publication, $matches)) {
$matched = true;
}
}
if (!$matched) {
if (preg_match('/(?<journal>.*),\\s+(?<volume>\\d+),\\s+(?<page>\\d+),/Uu', $publication, $matches)) {
$matched = true;
}
}
// Proc. U.S. nat. Mus., 99, no. 3247, 475.
if (!$matched) {
if (preg_match('/(?<journal>.*),\\s+(?<volume>\\d+), no. (?<issue>\\d+),\\s+(?<page>\\d+)\\.$/Uu', $publication, $matches)) {
$matched = true;
}
}
if (!$matched) {
if (preg_match('/(?<journal>.*),\\s+(?<volume>\\d+) \\((?<issue>\\d+)\\),\\s+(?<page>\\d+)\\.$/Uu', $publication, $matches)) {
$matched = true;
}
}
// Spixiana 7 (2): 125.
if (!$matched) {
if (preg_match('/(?<journal>.*)\\s+(?<volume>\\d+) \\((?<issue>\\d+)\\):\\s+(?<page>\\d+)\\.$/Uu', $publication, $matches)) {
$matched = true;
}
}
// Ann. Mag. Nat. Hist. , ser. 8 vol. 13 p. 436
if (!$matched) {
if (preg_match('/(?<journal>.*)\\s*,\\s+ser.\\s+(?<series>\\d+)\\s+vol.\\s*(?<volume>\\d+)\\s+p.\\s+(?<page>\\d+)\\s+(?<year>[0-9]{4})/Uu', $publication, $matches)) {
$matched = true;
}
}
print_r($matches);
echo $publication;
if (!$matched) {
} else {
$reference = reference_from_matches($matches);
if (!isset($reference->issn)) {
// Try and get ISSN from bioGUID
$issn = issn_from_title($reference->secondary_title);
if ($issn != '') {
$reference->issn = $issn;
} else {
// No luck with ISSN, look for OCLC
if (!isset($reference->oclc)) {
$oclc = oclc_for_title($reference->secondary_title);
if ($oclc != 0) {
$reference->oclc = $oclc;
}
}
}
}
//print_r($reference);
$atitle = '';
if (isset($reference->title)) {
$atitle = $reference->title;
}
$search_hits = bhl_find_article($atitle, $reference->secondary_title, $reference->volume, $reference->spage, isset($reference->series) ? $reference->series : '', isset($reference->year) ? $reference->year : '');
if (count($search_hits) == 0) {
// try alternative way of searching using article title
$search_hits = bhl_find_article_from_article_title($atitle, $reference->secondary_title, $reference->volume, $reference->spage, isset($reference->series) ? $reference->series : '');
}
//print_r($search_hits);
foreach ($search_hits as $hit) {
$pages[] = $hit->PageID;
}
}
print_r($pages);
return $pages;
}
<?php
require_once dirname(__FILE__) . '/utils.php';
$filename = 'notparsed.txt';
$file_handle = fopen($filename, "r");
$failed = array();
while (!feof($file_handle)) {
$line = fgets($file_handle);
$parts = explode("\t", $line);
$parts[1] = trim($parts[1]);
if (preg_match('/(?<authorstring>.*)\\s*(?<year>[0-9]{4})\\.\\s+(?<title>.*)\\s+<em>(?<journal>.*)<\\/em>\\s+(?<series>.*)?\\s*<strong>(?<volume>\\d+)<\\/strong>(\\((?<issue>\\d+)\\))?:\\s+(?<spage>\\d+)([–|-](?<epage>\\d+))\\b/Uu', $parts[1], $m)) {
//print_r($m);
$matched = true;
$reference = reference_from_matches($m);
//print_r($reference);
$reference->id = $parts[0];
$reference->keywords[] = $parts[0];
$openurl = reference2openurl($reference);
//echo $openurl . "\n";
bioguid($reference);
if (isset($reference->epage)) {
$biostor_id = import_from_openurl($openurl);
if ($biostor_id != 0) {
$found = true;
$reference->url = 'http://biostor.org/reference/' . $biostor_id;
}
}
//print_r($reference);
echo reference2ris($reference);
} else {
/*
