public function nsdrPopulate($tthis, $context, $data)
{
$ret = array();
//debug_print_backtrace();
$labsIter = new LabsIterator();
$filters = array();
$filters['patientId'] = key($context);
if (isset($context[key($context)]['filters']['description'])) {
$filters['description'] = $context[key($context)]['filters']['description'];
}
$filters['limit'] = '1';
$labsIter->setFilters($filters);
$ret = $labsIter->first()->toArray();
return $ret;
}
public static function generate($patient, $provider)
{
if (!$patient instanceof Patient) {
$patientId = (int) $patient;
$patient = new Patient();
$patient->personId = $patientId;
$patient->populate();
}
self::$patient = $patient;
if (!$provider instanceof Provider) {
$providerId = (int) $provider;
$provider = new Provider();
$provider->personId = $providerId;
$provider->populate();
}
self::$provider = $provider;
$building = Building::getBuildingDefaultLocation($provider->personId);
self::$providerBuilding = $building;
$data = array();
$data[] = self::generateMSH(array('buildingName' => $building->name));
$data[] = self::generateSFT();
$data[] = self::generatePID($patient);
$order = new OrderLabTest();
$iterator = $order->getIteratorByPersonId($patient->personId);
foreach ($iterator as $orderLabTest) {
$data[] = self::generateORC($orderLabTest->order->provider);
$result = array();
$result['orderLabTest'] = $orderLabTest;
$loinc = new ProcedureCodesLOINC();
$loinc->loincNum = $orderLabTest->labTest;
$loinc->populate();
$result['loinc'] = $loinc;
$orderId = (int) $orderLabTest->orderId;
$labTest = new LabTest();
$labTest->populateByLabOrderId($orderId);
$result['labTest'] = $labTest;
$data[] = self::generateOBR($result);
$labsIterator = new LabsIterator();
$labsIterator->setFilters(array('orderId' => $orderId));
foreach ($labsIterator as $row) {
$result['result'] = $row;
$data[] = self::generateOBX($result);
}
$data[] = self::generateSPM($orderLabTest->collectionSample);
}
return implode("\n", $data);
}
protected function _getLabResults($filters)
{
$labs = array();
$showCalcLabs = (bool) $this->_getParam('showCalcLabs', false);
$calcLabsArray = array();
if (true) {
$calcLabs = new CalcLabs();
$calcLabsArray = $calcLabs->getAllCalcLabsArray($filters['patientId']);
}
$labs = $calcLabsArray;
$labsIterator = new LabsIterator();
$labsIterator->setFilters($filters);
foreach ($labsIterator as $lab) {
$tmpArr = array();
$tmpArr[] = $lab->observationTime;
$tmpArr[] = $lab->description;
$tmpArr[] = $lab->value;
$tmpArr[] = $lab->units;
$tmpArr[] = $lab->referenceRange;
$tmpArr[] = $lab->abnormalFlag;
$tmpArr[] = $lab->resultStatus;
$tmpValue = $lab->value;
if (!is_numeric($tmpValue)) {
if (strtolower($lab->abnormalFlag) != "abnormal") {
// normal
$tmpValue = 1;
} else {
// abnormal
$tmpValue = 0;
}
}
$tmpArr[] = date('Y-m-d', strtotime($lab->observationTime)) . '::' . $tmpValue;
$labs[$lab->labResultId] = $tmpArr;
}
$rows = $this->_toJsonArray($labs);
return $rows;
}
public function populate($patientId, $userId, $visitId)
{
$this->_patientId = (int) $patientId;
$patient = new Patient();
$patient->personId = $this->_patientId;
$patient->populate();
$this->_title = $patient->displayName . ' Healthcare Record';
$this->patient = $patient;
$this->_userId = (int) $userId;
$user = new User();
$user->personId = $this->_userId;
$user->populate();
$this->user = $user;
$visit = new Visit();
$visit->visitId = (int) $visitId;
if ($visit->visitId > 0 && $visit->populate()) {
$this->visit = $visit;
}
$this->building = Building::getBuildingDefaultLocation($this->user->personId);
$performers = array();
$problemList = new ProblemList();
$filters = array();
$filters['personId'] = $this->_patientId;
$this->setFiltersDateRange($filters);
$problems = array();
$problemListIterator = new ProblemListIterator();
$problemListIterator->setFilters($filters);
foreach ($problemListIterator as $problem) {
$problems[] = $problem;
$providerId = (int) $problem->providerId;
if (!isset($performers[$providerId])) {
$provider = new Provider();
$provider->personId = $providerId;
$provider->populate();
$performers[$providerId] = $provider;
}
}
$this->problemLists = $problems;
unset($filters['personId']);
$filters['patientId'] = $this->_patientId;
$labResults = array();
$labTests = array();
$labOrderTests = array();
$labsIterator = new LabsIterator();
$labsIterator->setFilters($filters);
foreach ($labsIterator as $lab) {
// get the lab order
$labTestId = (int) $lab->labTestId;
if (!isset($labTests[$labTestId])) {
$labTest = new LabTest();
$labTest->labTestId = (int) $lab->labTestId;
$labTest->populate();
$labTests[$labTestId] = $labTest;
}
$labTest = $labTests[$labTestId];
$orderId = (int) $labTest->labOrderId;
if (!isset($labOrderTests[$orderId])) {
$orderLabTest = new OrderLabTest();
$orderLabTest->orderId = $orderId;
$orderLabTest->populate();
$labOrderTests[$orderId] = $orderLabTest;
}
$orderLabTest = $labOrderTests[$orderId];
$providerId = (int) $orderLabTest->order->providerId;
if (!isset($performers[$providerId])) {
$provider = new Provider();
$provider->personId = $providerId;
$provider->populate();
$performers[$providerId] = $provider;
}
if (!isset($labResults[$orderId])) {
$labResults[$orderId] = array();
$labResults[$orderId]['results'] = array();
$labResults[$orderId]['labTest'] = $labTest;
$labResults[$orderId]['orderLabTest'] = $orderLabTest;
}
$labResults[$orderId]['results'][] = $lab;
}
$this->labResults = $labResults;
$this->performers = $performers;
$this->populateHeader($this->_xml);
$this->populateBody($this->_xml);
return $this->_xml->asXML();
}
protected function _getLabResults($filters)
{
$order = $this->_getParam('order');
if (strlen($order) > 0) {
$orders = explode(';', $order);
$values = array();
foreach ($orders as $val) {
$x = explode(':', $val);
if (!isset($x[1])) {
$x[1] = 'ASC';
}
$values[] = $x;
}
$filters['orders'] = $values;
}
$labs = array();
$showCalcLabs = (bool) $this->_getParam('showCalcLabs', false);
$calcLabsArray = array();
if (false) {
$calcLabs = new CalcLabs();
$calcLabsArray = $calcLabs->getAllCalcLabsArray($filters['patientId']);
}
$labs = $calcLabsArray;
$labsIterator = new LabsIterator();
$labsIterator->setFilters($filters);
foreach ($labsIterator as $lab) {
$tmpArr = array();
$tmpArr[] = $lab->observationTime;
$tmpArr[] = $lab->description;
$tmpArr[] = $lab->value;
$tmpArr[] = $lab->units;
$tmpArr[] = $lab->referenceRange;
$tmpArr[] = $lab->abnormalFlag;
$tmpArr[] = $lab->resultStatus;
$tmpArr[] = $lab->labTest->clia_disclosure;
$tmpValue = $lab->value;
if (!is_numeric($tmpValue)) {
if (strtolower($lab->abnormalFlag) != '' || strtolower($lab->abnormalFlag) != 'n') {
// normal
$tmpValue = 1;
} else {
// abnormal
$tmpValue = 0;
}
}
$tmpArr[] = date('Y-m-d', strtotime($lab->observationTime)) . '::' . $tmpValue;
$sign = (int) $lab->labTest->labOrder->hasSigningEntry();
$tmpArr[] = (int) $sign . '::' . $lab->labTest->labOrder->labOrderId;
$labs[$lab->labResultId] = $tmpArr;
}
$rows = $this->_toJsonArray($labs);
return $rows;
}
public function listLabResultsJsonAction()
{
$orderId = (int) $this->_getParam('orderId');
$rows = array();
$labsIterator = new LabsIterator();
$labsIterator->setFilters(array('orderId' => $orderId));
foreach ($labsIterator as $lab) {
$rows[] = $this->_generateLabResultRowData($lab);
}
$data = array();
$data['rows'] = $rows;
$json = Zend_Controller_Action_HelperBroker::getStaticHelper('json');
$json->suppressExit = true;
$json->direct($data);
}
public static function generate($patientId)
{
// v2.5.1
$patientId = (int) $patientId;
$ret = array();
$msh = array();
$msh['messageType'] = array('code' => 'ORU', 'eventType' => 'R01', 'structure' => 'ORU_R01');
$ret[] = self::generateMSH($msh);
// MSH
$ret[] = self::generateSFT();
// SFT
$ret[] = self::generatePID($patientId);
// PID
$filters = array('patientId' => $patientId);
$labResults = array();
$labTests = array();
$labOrderTests = array();
$labsIterator = new LabsIterator();
$labsIterator->setFilters($filters);
foreach ($labsIterator as $lab) {
// get the lab order
$labTestId = (int) $lab->labTestId;
if (!isset($labTests[$labTestId])) {
$labTest = new LabTest();
$labTest->labTestId = (int) $lab->labTestId;
$labTest->populate();
$labTests[$labTestId] = $labTest;
}
$labTest = $labTests[$labTestId];
$orderId = (int) $labTest->labOrderId;
if (!isset($labOrderTests[$orderId])) {
$orderLabTest = new OrderLabTest();
$orderLabTest->orderId = $orderId;
$orderLabTest->populate();
$labOrderTests[$orderId] = $orderLabTest;
}
$orderLabTest = $labOrderTests[$orderId];
if (!isset($labResults[$orderId])) {
$labResults[$orderId] = array();
$labResults[$orderId]['results'] = array();
$labResults[$orderId]['labTest'] = $labTest;
$labResults[$orderId]['orderLabTest'] = $orderLabTest;
$providerId = (int) $orderLabTest->order->providerId;
$provider = new Provider();
$provider->personId = $providerId;
$provider->populate();
$labResults[$orderId]['provider'] = $provider;
}
$labResults[$orderId]['results'][] = $lab;
}
foreach ($base->labResults as $orderId => $value) {
$ret[] = self::generateORC($value);
// ORC
$ret[] = self::generateOBR($value);
// OBR
foreach ($value['results'] as $result) {
$data = array('result' => $result, 'labTest' => $value['labTest'], 'orderLabTest' => $value['orderLabTest'], 'provider' => $value['provider']);
$ret[] = self::generateOBX($data);
// OBX
}
$ret[] = self::generateSPM($value);
// SPM
}
/*$iterator = new LabsIterator();
$iterator->setFilters(array('patientId'=>$patientId));
foreach ($iterator as $lab) {
$data = array();
$data['lab'] = $lab;
$orderLabTest = new OrderLabTest();
$orderLabTest->orderId = $lab->labTest->labOrderId;
$orderLabTest->populate();
$data['orderLabTest'] = $orderLabTest;
$loinc = new ProcedureCodesLOINC();
$loinc->loincNum = $orderLabTest->labTest;
$loinc->populate();
$data['loinc'] = $loinc;
$ret[] = self::generateOBR($data); // OBR
$ret[] = self::generateOBX($data); // OBX
$ret[] = self::generateSPM($data); // SPM
}*/
return implode("\r\n", $ret);
}
